Array 1 716176-716937 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP066710.1 Staphylococcus pseudintermedius strain DSP034 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    716176	    36	 100.0	    30	....................................	AGCAGAACAATAATAAAGAGTTGTACGAGC 	
    716242	    36	 100.0	    30	....................................	AACCACGTGAGTACATGCGTTATATGTTTA 	
    716308	    36	 100.0	    31	....................................	AACAAAAATTAGCATATATTGCTACGATTAC	
    716375	    36	 100.0	    30	....................................	ATGGACGCTTTGCTCACACGATTCAGATAC 	
    716441	    36	 100.0	    30	....................................	ATCGGCGATGATTACAGGGAGCGTGACGCA 	
    716507	    36	 100.0	    29	....................................	AACAAAGTACTGCGTATACGTGGTGTGCG  	
    716572	    36	 100.0	    29	....................................	AAGAAAAAGCATATTCAATTACTGCAATT  	
    716637	    36	 100.0	    30	....................................	AACCACGTGAGTACATGCGTTATATGTTTA 	
    716703	    36	 100.0	    30	....................................	AAATAGATGAGGAAACTTTTAATAGTATCA 	
    716769	    36	 100.0	    30	....................................	GTAAACACTGTTTATCATGTTGAAGTGGCC 	
    716835	    36	  97.2	    30	............................A.......	GTTATGATGTTTGGCGATATGGGTCGTCGT 	
    716901	    35	  86.1	     0	.........T................-.CA.C....	|                              	TC [716934]
==========	======	======	======	====================================	===============================	==================
        12	    36	  98.6	    30	GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC	                               	       

# Left flank :   TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTTACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGGGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCCAAGCCTCAATTTTGAAAAGGATTGAGTTAATGTTTTTGGATTTGAG
# Right flank :  CCTTCTTTATAATCGTACATCAACCTCACTATGCCTTCAAAATAAATAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTACGAATCTCTCAATTGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAATAAATAGAAAGCAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCACATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATGCC

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.97%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.50,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-11] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//