Array 1 43511-42441 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATUX01000005.1 Schaalia vaccimaxillae DSM 15804 G439DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================================================================================ ================== 43510 28 100.0 33 ............................ GCTGGTTGATGGCTACTGAGAGTGTGTAGCTGG 43449 28 100.0 33 ............................ GCATTCGACCACCGCGAGGAAGAAGAAGCGGCG 43388 28 100.0 33 ............................ TGAGTGAACGCTGCAGAGGACACGCCAAACACA 43327 28 100.0 33 ............................ GGTTGGCTATGTCGAACGCCTGCCGGTTATACC 43266 28 100.0 33 ............................ CCAATCTCAGGTCTCGCGGCGATGGAAGGGGCG 43205 28 100.0 33 ............................ TGGATCGCAATGATCACCTCGATGCTCGGAGGA 43144 28 100.0 33 ............................ CGCTGCGCCACGCATGATCGCCACAGCCGCCGA 43083 28 100.0 33 ............................ CTCAGCCCTCAGCTCAGCCGTATCCGGAATCTC 43022 28 100.0 33 ............................ CCGGAGGCGAAACACGAACCCTCGCCTACTCCG 42961 28 100.0 33 ............................ GACTAAAGAATCTTCAATATCTTCTGTTTCTAA 42900 28 100.0 33 ............................ CAGGGCGTGAATATGCCCCCGTCGAGGGCTTCG 42839 28 100.0 33 ............................ TGGCCGACGCACACCACTTGGAACACTCGCATG 42778 28 96.4 33 ........A................... GGAGAAGAAACCATGCGATTCGTCCGATCTGTG 42717 28 89.3 160 ..................C.C..C.... CACGCACAATAAAATGCGCGGCCAAAGGGGGTGGTTACGCTCGCACAAACGTAAATAAGTACGCTCTCTCTGGACGGCGCCGTGGCCGCTCGCATGCTTTAGGATTGTCAGCCGCTTAGGCAGAAATCCTCCAACAGATTACGATATTTCTCCAGGGAGC 42529 28 82.1 33 T.......T...G.G..A.......... TCATTGGTACAGAGTTCTGGATAGGCTCCCCCA 42468 28 85.7 0 .............A.........A.GG. | ========== ====== ====== ====== ============================ ================================================================================================================================================================ ================== 16 28 97.1 42 GTTGACCCCGCGTGAGCGGGGATGATCC # Left flank : CCAGAAGAGAGCTGTTGCTGGTGGAGAGAATTATGCAGAGGAGGCCGAGGATTGGTAGTCCTGGTTCTGTCAGCAGCACCAGCATCCTTACGTGGTTCGATGACACGGTGGCTGCTGGAGGTTTCCCCCGGGGTTTTTGTCGGCCACCTGTCCAAGCGAGTACGAGAACAAGTTTGGGAGCTGGTGCGTACGTACATCGGCGACGGTCGCGCCTTATTGATCTGGTCGGAACGGTCGGAGCAACACTTCTCTGTAGCATCTCTCGGACATGATCGAGAACCTGTAGACATCGAAGGCTGTCTTGTCATGCGCACCTCCTATCGAGACTCCGAAGAATCAGTGACGATGCCGGGAGCTGTCAGGCCTGCGAAGGAGTCATGGTCCATTGCCGCTCGCCGAAGGCGCTTTCATAATTCCGCCGAGCGTTCGCTAGGTCAGCAGTAAACGAAATCCTCCTTTGATAGAGTTCCGTTGCGTTGAGATCTTAACGATCTAGAAGT # Right flank : AACCGGATTCAAGCACTTCTGAGCAAAATCAGGGGCGGTGCCAATCTAACTAAACTGAGACTATCCTGTCGTTTTTCTATAAGACCTTGACAGCCTCGACGAACCCATACGACTGCCTGCTTTTGAAAAGTTCCAGAACATCGGTCATCGTCCAATTCGGATCCTTCCATTCCGGACTTCAAAAGATAGCCTCGAACACTCGGGAAGCCAACTCTCGATGAAGGCACAGAACGTCGATTAAAAAGCGTCAGGATCCAGCGCAATCAGATATCAGGCGAGCCTACCTCGAGGAAAAGCTCTTCAATTAAAAGGCACATAAAGTGCATGATTACATCCGTCCGGCCAGCAACTGCAGTAACCATCTACGAGGCTCCTCAGTTGCCAAGCAAAGAAGTTTTGAAGTTCCTACTTATCAGCGAAACAACACATCACCGCCGCCGCACCAGTAGCACCGAATCCTCCAGCTCACCGACCACACCGTCAGGTCCAACAACTTCGCG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.79, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGACCCCGCGTGAGCGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [13-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //