Array 1 187053-190741 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNZA01000005.1 Marinomonas communis strain DSM 5604 Ga0215679_105, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 187053 28 100.0 32 ............................ ACAGCCACGCCGCCAATGGTATAAACCGCTTT 187113 28 100.0 32 ............................ TAAGGACAACAGGCCATGCGCTTGCTGTCCTT 187173 28 100.0 32 ............................ TATTAGAAAAAGCCAAAGGTAAGGCACCTAAT 187233 28 100.0 32 ............................ TGTCTGATATGTGGCCTGCTTTTTACTTATCG 187293 28 100.0 32 ............................ ACGATGTGATAAAGGTGACTAATCCCCTCACG 187353 28 100.0 32 ............................ TCTAATGCAAAACTAATATCAGACATTAGTAA 187413 28 100.0 32 ............................ TCAGTGGGATCGTCAGTATTTTCCAGCGCCTT 187473 28 100.0 32 ............................ GCCAAGGTATGCACCTAAAGTGTTGCCCTCTA 187533 28 100.0 32 ............................ TATGTTATCCCTGAGTCTACATGTAGTATCGA 187593 28 100.0 32 ............................ AGAACCATTGACAGAAAGGTTGGCCTTCTCTA 187653 28 100.0 32 ............................ AAGAGTTACGCCGTTTTCAAGCGAGCGGATAC 187713 28 100.0 32 ............................ AATAGCTATGCAGGTTATGTGGCTAAAAAATT 187773 28 100.0 32 ............................ ATCCACAGATGATGACTTAGAGGCTTTTGCTC 187833 28 100.0 32 ............................ AGCGCACCTGTTTGATCAAAGATATCGTCAAA 187893 28 100.0 32 ............................ TGCTTGACTGAGCCGTCTGATAATTCAGAAAG 187953 28 100.0 32 ............................ ATGAGCGGTTCAGAGGCGGGTACAAAATACGG 188013 28 100.0 32 ............................ AACGAAGCATAGTCGCCGAGATCGCCGGAGAG 188073 28 100.0 32 ............................ CGTAGAAGTCGATTCCATGATTTTTGCAGTAG 188133 28 100.0 32 ............................ TAAAGCGGTTTTGTAAGGTTCGGCCTGTTCAA 188193 28 100.0 32 ............................ AAATTGTCACGCTCAATTTTCAGGCGGTTAAT 188253 28 100.0 32 ............................ TAAGAAAAAGGGCATTCAAGAAACCGTCACCG 188313 28 100.0 32 ............................ CTGTGAAATCATTTAGTTGTTTCATGCCATGC 188373 28 100.0 32 ............................ TGCTCTGCCAATTCGATATTTTCTGCTGCGAT 188433 28 100.0 32 ............................ GTTTGAACCTTTGGAAGCGCGGAGCCTTCCGC 188493 28 96.4 32 ..................A......... GCTAGGGCCGCAAACCGGAGTAAAGCCGATGA 188553 28 100.0 32 ............................ TTAGCGATAGCACGTTGCTGGTCGCCAGCGTT 188613 28 100.0 32 ............................ TTCTGCGTTCTTTGCGCATCGATCCAGCTCAT 188673 28 100.0 32 ............................ AAGACGCCGTCGACCGCAACGTAACCAAGGCA 188733 28 100.0 32 ............................ TGGCTGCGGGATGGCGAGGTGTTTGGCGAGCA 188793 28 100.0 32 ............................ TCATCCCCAATCACAGTGAATGGGTTGATGGT 188853 28 100.0 32 ............................ TAGAGGCCGCAGTCAAGATGGTAAAGCGTGAC 188913 28 100.0 32 ............................ CAGCCTCTATTTATGGCCCAATACTAGAGGCA 188973 28 100.0 32 ............................ TCGCGTTCTGCTTGCTCTTGATCCAGCGCTTC 189033 28 100.0 32 ............................ GACAACGCTTCCCATAGAGCATGGCGTGGTAC 189093 28 100.0 32 ............................ TTGCGTGCGGAATGTTTTGGTGACAATCAAGT 189153 28 100.0 32 ............................ AGGAGATGTTTCAGGATCTGGATTGACGTACA 189213 28 100.0 32 ............................ CACTCGTTGACGGATAACCCCGTAAAAAAGGT 189273 28 100.0 32 ............................ ATCAAATGACTGATCAAGCAGCACATCTAACT 189333 28 100.0 32 ............................ AATGCGCAGCACGGCATCATCTGTTGTGATTA 189393 28 100.0 33 ............................ CAAGTGCGTCAAGTTTCTATTGTTTTGAATGGT 189454 28 96.4 32 ..............T............. ACTAAAGCTGAACTCTGGCAGGCTATGCGTGG 189514 28 100.0 32 ............................ GTTGGCGATTATTACGGACGTTCAAGCAACAC 189574 28 100.0 32 ............................ CTGTACGAGTTCAGCTGACGGATTTTGTTGGT 189634 28 100.0 32 ............................ ACAGTTGCATATATTCGTCGATCTTACCTAGC 189694 28 100.0 32 ............................ AAATCGTTTCGGGTGTTCTGGGATGGGAAACC 189754 28 100.0 32 ............................ TAGATCATCAGGGATAAACCAAGTCTCCTTAA 189814 28 100.0 32 ............................ GGTCTTCGTATTTTTCTGGGCTCAAATGTTTC 189874 28 96.4 32 .............T.............. AGTGAGCATAATCAAAGAGTATCTTGGCTTAT 189934 28 100.0 32 ............................ GTAGTCGATCCCCATTTCGGCAATCTCATGGC 189994 28 100.0 32 ............................ AAAGGGTGAGGAAGTAAGCCCCGAGTGGAGTA 190054 28 100.0 32 ............................ TTGGCAGCGATGCGGACTACTTAGCAAATACG 190114 28 100.0 32 ............................ TTGGCAGCGATGCGGACTACTTAGCAAATACG 190174 28 100.0 32 ............................ TAGACCTTTATCTATGCAGGATTGAATCTGCT 190234 28 100.0 32 ............................ AGAAACACCGCACCCCTGCCAATTAACCACGG 190294 28 100.0 32 ............................ AGCTTTCGATTGGCAAATCCGCGCCCGTCATA 190354 28 100.0 32 ............................ AACTCCAAGGAATGAGCACAGCACAGCGTTTA 190414 28 100.0 32 ............................ GTTGCGGCGTCCAATACTACGGCAGGCGTTCC 190474 28 96.4 32 ............A............... AATCGAAAGCTGGCAGTACGACTACGAAGAAG 190534 28 96.4 32 ............A............... TCGCCGATCTTGGCAATGATCCAGTCTATTTT 190594 28 96.4 32 ............A............... AAAGCGGTTCTCTAATCGCGCTAGGTAACTGG 190654 28 96.4 32 ............A............... AATGATCCATCTGGACGTAAACCCCATTGAAT 190714 28 71.4 0 .......T..T.AT....T.T..G...G | ========== ====== ====== ====== ============================ ================================= ================== 62 28 99.1 32 CTTCACCGCCGAGCAGGCGGCTTAGAAA # Left flank : GGTGTTGGAATCGTTAGCTTGGCGCAAAGGGCTAGGGGACTTTACTCTGGTATCCGACGTTACTGAGGCTCCGCAAACGAGTGAGTATTGGTTAGTGCAGCGTATTCATGTGCAAAGTAACCCAGATCGTATACGTCGCCGTGCGATGAAGCGTCATAATTTGACTTACGAACAAGCGGTTGAGCAAATACCGGACAGTGTGGGTAAAGAGCTTGACTTACCATTTGTTCGTATCAAAAGCCAATCAACAGGCGGACAGCAGTTCCCTTTATTTATAAAGCAAACCGCGATTTCGGAAGCCTCGCAACCTAACGAAATACAGTTTTCAAAATATGGACTGAGTTCAGCAACACCGGTACCTAAGTTTTAACCCTTTTTTCAGCGATGCCCGCCAAAGCCCGTAAACACGGGCTTTGGCTTCTTTGCTATGAAAAAGGGTACTTTACATGAAAATAGATAAAGCTCTTTAACAATCAACTAGATACTGATAATTTTATCTA # Right flank : GTAGTTTGCCAAGCTGTAGAAAGTCGAGTTGAAGATAAACCAGGTGAAAGTAGCATTGACTGCGATGATCTTGAACAATATGTGACTAACTTAATGTCTCTTTATTGAATGGCGATTGAGTCATGTTGTTCTCTTTAATTGATTTTTTAAGATTGCTGCAGAGCAGTTGGTGAAATCATTTGATTAGCCGAAATATTCCTTATAAGAGCATTAGCATTGTATCTCTGCAAAACAACATTATACTGTATATGTATACAGTTTAGTGTTGTTTTGGTGGTTGTATGCGTGTGACGTATTTGGGGTCGGCTGAGTCGTCTGGTTTTTTTGCGGCGAAACAGATGAAGATGCCGCTTTATGTGGAGTCGGTGTCGGCGGGTTTTCCATCGCCTGCTCAGGATTTTGTGGAATGCTCGTTGGATTTGAATGAATTGTGTATTCAGCATCCGAGTGCGACGTTTTTTGTGCGGGCGCAGGGGGATTCTATGGTGGATGCTGGGATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCGCCGAGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.50,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //