Array 1 7-4597 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTR01000126.1 Bacterium endosymbiont of Bathymodiolus sp. 5 South isolate BCLUESOX, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 7 36 100.0 30 .................................... TCAAGAGGATAAGAATCCTGAAGATTTTCG 73 36 100.0 30 .................................... CTGATACTTCAACTTATCAACTTGACCGCT 139 36 100.0 30 .................................... GATCCTGAATAAAACCCTCGGAAAGAGTAG 205 36 100.0 30 .................................... GTCACTCCCGTCTTGATGTCTCCCAAGTTG 271 36 100.0 30 .................................... ACTAAGATGTCAGCAACTGTTGTTGCAAGT 337 36 100.0 30 .................................... AGCATAATAGTTGCTGAGGTATCACGATTT 403 36 100.0 30 .................................... ACATTTACAATCAGCAACAAAGTCATCATA 469 36 100.0 30 .................................... GTAACATCAGAACGAACTTTAAGACGCTCA 535 36 100.0 30 .................................... CTTGGTGGTGTTGCTTCGGGTTATGGTATG 601 36 100.0 30 .................................... TCAGCAACATGATTTTGCATAGTCTCAAAA 667 36 100.0 30 .................................... CCACCACGAGCATCTAATTCGAGAACTTTC 733 36 100.0 30 .................................... CGAAACGGAAGAGCAGAAACAATACAATCC 799 36 100.0 30 .................................... TATACCGATATTCGGCGTAACGCTCTTGAT 865 36 100.0 30 .................................... ATACGTTTAATCTTCGTTTAACTGCTCTTG 931 36 100.0 30 .................................... TAAGTCTAAGCGTATGTCTTCTAAGTCTAA 997 36 100.0 30 .................................... CTTTTAGTCCTGATTCTGGCTTGTTTGAGT 1063 36 100.0 30 .................................... AACTAAGATACTGGCAATGATTAACTCGAA 1129 36 100.0 30 .................................... GACTGTACTTAATAAAGAGATTTATTATAA 1195 36 100.0 30 .................................... GATGACGACGACCTTTATCATGACGATGTA 1261 36 100.0 30 .................................... GATGTCAGGACAACTTGGAACAGCATTAAA 1327 36 100.0 30 .................................... TCAGTTAGCACAGTTACATCAAGTGGGTAA 1393 36 100.0 30 .................................... ACTTTATCGAAGTCATGAGACGAGCCGTAT 1459 36 100.0 30 .................................... ATGCGTTGTCATCATGAAGCCTCCCTTCAT 1525 36 100.0 30 .................................... CCAGTACCACGAGCAGATAGAATGGGGTTA 1591 36 100.0 30 .................................... AGAGTTGAAGTAGATGTAATCTTCAAACCA 1657 36 100.0 30 .................................... GCCGATAGATATCCACCGGTGGCTCTATCT 1723 36 100.0 30 .................................... ACCGAAGTAGTAGTTACACCTAAATTACCA 1789 36 100.0 30 .................................... TCATAGTGGCAGAGGTATCACGATTTGCCA 1855 36 100.0 30 .................................... TCAAGAGACTCAAACAAACCAGAATCGGGA 1921 36 100.0 30 .................................... TTGAAAGCGGTGGTCGTTATTCCAAGCCAA 1987 36 100.0 30 .................................... TCATATTTATACGACTCTCTAGACACGATA 2053 36 100.0 30 .................................... TAGCAATTTACAGGGAAGGTTTGTATAAAC 2119 36 100.0 30 .................................... CGTTTGAATTGCAATTCAAGCAGTTTGTGG 2185 36 100.0 30 .................................... ACTGGGAACCCGACTGGGAGGAAAATACAA 2251 36 100.0 30 .................................... ATATTGAAGTGGGGAATATTTTGGTTAGAG 2317 36 100.0 30 .................................... AATGGAACAAAAGACGACGAAATATAATAA 2383 36 100.0 30 .................................... CACTATATTTACCGGGGATAAAGCAAGTTG 2449 36 100.0 30 .................................... ATAAAGCCCGCATAGCCCATTTATATCTTG 2515 36 100.0 30 .................................... TTGTAAGCGTACAAGTCCTTCAGTTCAGGT 2581 36 100.0 30 .................................... CACACGAGTCAACAACACATGGATTTAGTG 2647 36 100.0 30 .................................... ATATTATGAAGATTAAAAATAAATTATTTG 2713 36 100.0 30 .................................... GTCTATCAAGTGCGTGCCAGCGAAAATTTA 2779 36 100.0 30 .................................... CTAGAAATATTAGATGTATTTAATCTTGAA 2845 36 100.0 30 .................................... TGATGACGCACTATTTACAAACATTGGACT 2911 36 100.0 30 .................................... TCCGGTTCGTCGCTCGAGTTATGCCCTGGT 2977 36 100.0 30 .................................... CTCTACCGTCTTGCAGTAATGCTTGTGTTG 3043 36 100.0 30 .................................... AGAGCAGACGAAAACAAACCAAAAAAAAGA 3109 36 100.0 31 .................................... AGAGGATTTAGAGGGCTTAAAAAGCAAATAA 3176 36 100.0 30 .................................... ACACCAGAGCCATAGGCTTTAGAGTAATCC 3242 36 100.0 30 .................................... TTAACAGTAGTATGAACGGAACCAGTAAGA 3308 36 100.0 30 .................................... AGGTCAGCACGGATAATCATATAGCCATGA 3374 36 100.0 30 .................................... ATTCGTTGTTGTCATGAATCTACTTTACAT 3440 36 100.0 30 .................................... AGTATCAGTTTCAAAGTGAAACGCATGGCC 3506 36 100.0 30 .................................... TCAGTCCACACAATTGCATCAAGTCGGCAA 3572 36 100.0 30 .................................... ATAGGACGAGCACAAATTAACTTAAAATAA 3638 36 97.2 30 ................................C... TGTGGCCTGCTATTCCCCTATTCAGGCTTA 3704 36 100.0 30 .................................... CCTTAAATGTTCTTCATTTTCAGAAATTTA 3770 36 100.0 30 .................................... GCGCAGGCACTGCTTACGGTACTTATCGTG 3836 36 100.0 30 .................................... CTTCTTTTAATCGCTCCCACGGTTCTAAAT 3902 36 100.0 30 .................................... CTAAATCATCTTGTTATTCCTTAATATGTG 3968 36 100.0 30 .................................... TGACGGCAAGGTGATTATACAAGTGAGTCA 4034 36 100.0 30 .................................... TAAATTGTCCAACACGGCAATCGGCAAATT 4100 36 97.2 30 ..........G......................... TTGCGGTACCAGAAGCGACATTAGTTTTTG 4166 36 100.0 30 .................................... TCACTTACCACAGTTACATCAAGTGGGTAA 4232 36 100.0 30 .................................... CTGCCTCTTTTATTAATGATATTGGTAATT 4298 36 100.0 30 .................................... GAGATTTATAAAATATGGTGTTTAATCGCC 4364 36 100.0 30 .................................... GGAGCCAAGCCCAAAACAAAATACGCACAA 4430 36 100.0 30 .................................... GGCCCAACTTTAGCAGTATTAAGACTAATA 4496 36 100.0 30 .................................... TGTCCGCCATGGTTGGCGTTAGCGCCATGG 4562 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 70 36 99.9 30 AGTATATCAGACCAGAGAGAGGGAGGGGTCTATAAC # Left flank : CTAAAGA # Right flank : ATACTCAATAACCACACATAGTATATCAGACCAGAGAGAGGGGTCTATAACAATAAGGGAAATCATTCTATCGCCTAAATGCAAATACAACAAGATTCTAATTGTGGCATATTCGCCATAAATTGCAACCAACTAAAGCACAAATCACTATTGCCAACATTGGCACCCAAAAACCCCGAATTAACGGGGTTAGTGGGTATAGGTGTTAATTAGTCAACCCTTAAAAACCACACAACAAATTGATTTATAACAATAAAACCAACAATAACCATAGACAAATCAACCAACTTTTGCTAAAATACCTCTTATTTCTTGGTCGTTTTGCTTAAAAAAAATGTTAACTAAATCCAGCCCAATATCCACCCAATCAAATCTTTTTCATTCAGAGCTCTTTTCTCAATTAGATGTCAAAGACCCTTTAATACAACTAGCCAACACTATTAATTGGACAGTCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTATATCAGACCAGAGAGAGGGAGGGGTCTATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [6.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 897-2971 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTR01000186.1 Bacterium endosymbiont of Bathymodiolus sp. 5 South isolate BCLUESOX, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 897 36 97.2 30 ........................A........... TTTGAAATAACGACGAACACCTTTATACGC 963 36 100.0 30 .................................... TCACGTGTGGCAATAGCATCATTGCGGGAA 1029 36 100.0 30 .................................... TCATGCTTGGCAAAGGAAGTAGGACGGTCA 1095 36 100.0 30 .................................... GCTTGTTTGCACCATAAGCCGAAGCGGCCG 1161 36 100.0 30 .................................... CAATATCATACTCGGGGAGAGCGTCACGAG 1227 36 100.0 30 .................................... TTGTTGTTGTGTTATGCCGTTGTTGGCACC 1293 36 100.0 29 .................................... CATTAACAGTAGTATGAACAGAATCGGTA 1358 36 100.0 30 .................................... ACGAGGGAAAAAGCAAAATTGTTCTTGGAA 1424 36 97.2 30 ..........A......................... GAACGCTCATGTCTAACAGCAGGTATCTGA 1490 36 100.0 30 .................................... TTAGTGCCAATGTAGTGGCAACACCTAATA 1556 36 100.0 30 .................................... GCACGGTCAGATAAGCCAGCATGGGGAGGA 1622 36 100.0 30 .................................... GAGCCTCAGAATGAGAAGGTTTATCCTTCA 1688 36 100.0 30 .................................... CTTTGAATCAGCATTAAAGAAACCAAGACG 1754 36 100.0 30 .................................... ATTGAACACCTAAATTACCAACATCATTGA 1820 36 100.0 29 .................................... TTATAGATCTATTTACCGATGTTATTGAG 1885 36 100.0 30 .................................... TTTACAAAGAAAATATATCAATCCTCAAAG 1951 36 100.0 30 .................................... TAGCAGTCAAAGATAAAGGTAGGCTCACTA 2017 36 100.0 30 .................................... AGGTGTGAAAGAGAGCGATTTAGAGAGAGT 2083 36 100.0 29 .................................... ACTTTAGACATAACATAACTCCTTAGTGG 2148 36 100.0 30 .................................... TAAATTTAGTAGACTTAGTAGACTTAGGAC 2214 36 100.0 30 .................................... CGGCCATGGCCGCATATTGCCACCAACCAA 2280 36 100.0 30 .................................... ACATCCAAGATTCTTATCCTATTGATACTT 2346 36 100.0 30 .................................... AAAACGGGTCACGAGGAGGAACACGAACGG 2412 36 100.0 29 .................................... AGTCTGAGCGACTTGGGTAACATCAAGGC 2477 36 100.0 29 .................................... ATATGAAAACGCTTCTGCATAGTCATCGT 2542 36 100.0 30 .................................... CTGAAAGTGCGAAAAGTGTTGCAAGATACG 2608 36 100.0 30 .................................... GAAATCATTATCTACTTGCGTGATATGTAT 2674 36 100.0 30 .................................... GAGAGATGCGATGATAATCAAGAATACAAC 2740 36 100.0 29 .................................... AGTGTCTATTGGTGGCTGGTTTATATCGA 2805 36 100.0 30 .................................... TTTGAAATAACGACGAACACCTTTATACGC 2871 36 100.0 29 .................................... AGACAAATTAGATCAGAGATCTCCATGGT 2936 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 32 36 99.8 30 GTTGTGATTTGCATTTAGGCGATAGTCGGTTACAAT # Left flank : ATTATATAACAAAAACTTATTTTATTTATACAAAATTTATAAAAATTTTTAGTAAAAGAGTAAAAGGGAGAGTAAAAGGGGGCGCCACCCTTTTTTAGGCCTCCCCTTTTTTTAAAACTCAAATCCCTGCCCACCTTGTCGCTTAGTTTTCGAATAAAACCCTCATTGCCACATGGCAAACCTTTGTGTGTATTTATTTTTAAAGTTTTATCATGCTGAACACCAACCATAGATTTTAAATAATCCTGATACTCGCTTGGCAAAACTCCAATATCATAATCCGTTACAAGACTATTGTTAACAAGCCCAGCGTGACACATTGCACTTGAATATTTATAATCAGTTGCATTCTCTACCATTTTTGCCTTAACTGGATTATTTTCAACATAAGCAAAGCCACAATACGATTCTAGCATGTCTTGGCATGAGTTTATTTTAACAGAAATTAAAATAAAAAATAAAAGGGTAGCATCCCCTTTATCTCTCAGCGCAAGACAAGA # Right flank : CCGTCAAATGATTGCG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCATTTAGGCGATAGTCGGTTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 1219-62 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTR01000331.1 Bacterium endosymbiont of Bathymodiolus sp. 5 South isolate BCLUESOX, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 1218 37 100.0 28 ..................................... AGTGTCTATTGGTGGCTGGTTTATATCG 1153 37 100.0 29 ..................................... GTAAAGTTGTTATTGCTATTTTTAAATAT 1087 37 100.0 29 ..................................... TAGATTGCTCGTCGCTAGGAGGCTTAGGG 1021 37 97.3 29 T.................................... GAGAGCAAAGACAAGACCACACAATAATA 955 37 100.0 29 ..................................... ATAGGATAAGAATCTTGAAGATTTTCATC 889 37 100.0 29 ..................................... CGCAGCGGCATATTGAATCCAGCCAACAA 823 37 100.0 29 ..................................... CGACGGGTTAAATCACCATACTCGCCGCA 757 37 100.0 29 ..................................... TGATTACGACGATGAGTACGAGTACCGGA 691 37 100.0 29 ..................................... CGGCGGGTTTTATCACCATATTCGCCACA 625 37 100.0 28 ..................................... CGCTTAGACAACTTAGAACGGCGTTTAA 560 37 100.0 29 ..................................... TCATATAGCCGTGAATATGGCCATGTTCA 494 37 100.0 29 ..................................... AAACGCTCGTTTGATTTGAAAGTGCACAC 428 37 100.0 29 ..................................... AAATTCAGTTGCGGCTGACATGGTGAGAA 362 37 97.3 29 T.................................... CCGGTGTTTGTTGTTGTCTCAATTTTTTT 296 37 100.0 29 ..................................... CACCAACGGAAGCATGACCAAGTCCCCAA 230 37 100.0 29 ..................................... ATAAGCCGCAGATTCAAAGGTAAGGTCAC 164 37 97.3 29 C.................................... CACCAAACGGTGCAGTATCTGAATTTACC 98 37 97.3 0 G.................................... | ========== ====== ====== ====== ===================================== ============================= ================== 18 37 99.4 29 AGTTGTGATTTGCATTTAGGCGATAGTCGGTTACAAT # Left flank : TGG # Right flank : TAGTGATGGTTCTCATGATGTAATTCTTCAGTTGTGATTTGCATTTAGGCGATAGGCGGGTA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTGTGATTTGCATTTAGGCGATAGTCGGTTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 148-3823 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTR01000063.1 Bacterium endosymbiont of Bathymodiolus sp. 5 South isolate BCLUESOX, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 148 37 100.0 35 ..................................... CCAATTCTTTCTTTAACTGCCTTTGTTTGATTTAT 220 37 100.0 34 ..................................... AGGAGCAGGAGAGGACAAAGCAATATCATACCCG 291 37 100.0 34 ..................................... AACTTCAGGCTCATCAAGTGAAAACATTAAAGTG 362 37 100.0 35 ..................................... ATAGGACACCCCGCTAGCATGGGATATGGTTTTGA 434 37 100.0 34 ..................................... GAACACTAGGCTTAGCAGGAATAGCAGGCTTGGC 505 37 100.0 36 ..................................... AATAAAACAGTTCATGAAAACTGCACAAATGGTCTT 578 37 100.0 35 ..................................... CATTGGGAGAAGTTTAATGGTGCTCAGGATAATCC 650 37 100.0 36 ..................................... AAAGAAGGTCGTAGAGGCAATTAACAGGATACCGAA 723 37 100.0 34 ..................................... TTATTCTTGACTCAAACAATTCAAGTATTTATGA 794 37 100.0 34 ..................................... GGTCAAGTTTCTTAAATAACTTATCATAATACTT 865 37 100.0 33 ..................................... ATCCTCGTAAAGTTGTTGCTGGTTCGTTCCTTA 935 37 100.0 33 ..................................... TCTATCGACTAGTAAAACACTCAAAAGGCGCAA 1005 37 100.0 35 ..................................... GACCATTATCATCACCTTGAATGGGTTCACGCTCT 1077 37 100.0 34 ..................................... TCATGTCCATGGCGCAACGCGATTACACATCGGA 1148 37 100.0 36 ..................................... GTTGGGTTTGGCCGCATTGACTGCAGCAGGTTTACT 1221 37 100.0 34 ..................................... AGTCTTACGAGTCCAAATTTTAGGAACACCTTGC 1292 37 100.0 34 ..................................... GAATCTCGGCGTTGCAAACACGAGGGACACTCAC 1363 37 100.0 34 ..................................... TGTCTAAGCGTTCATCTAAGCGAGTCTTTCGCTC 1434 37 100.0 34 ..................................... ACTTAGAATGGTCGGGACCGTCAGAAATATCAAT 1505 37 100.0 35 ..................................... AAGGAAATAGGACGATTATAGATTGAGTGTATCTT 1577 37 100.0 34 ..................................... GATCAAGTTTTTTAAATAACTTATCGTAATATTG 1648 37 100.0 35 ..................................... AAAACCCGTCGTCCTCATTATCATGCTCTCATCTT 1720 37 100.0 34 ..................................... TTGCGCACAAATTTCGCGAACCTTGAGACGCTCA 1791 37 100.0 33 ..................................... TTGGTAGGATGACTACTCCTATCTATCCGATAA 1861 37 100.0 34 ..................................... TTTCTGTAGTAACTTTTAAAATCTTTCCAGAAAC 1932 37 100.0 33 ..................................... AGCAAAGTGGTGCGATAAAGACAGCGACTTGAA 2002 37 100.0 36 ..................................... TCAAGCGAAGATCTAGGAAGAGAGTTAGTGATTTAG 2075 37 100.0 35 ..................................... GTATCGTGGGTTAATAAAATAACAGATAAGAAGAG 2147 37 100.0 34 ..................................... AAATGAAACATGACGATGTAATAACCTACTTGCA 2218 37 100.0 33 ..................................... GTGGTGTTAAATTCGTTCCAGTTCGTTAAATGT 2288 37 100.0 34 ..................................... AGCCTTGGGTCTCCTAAATCTGCGGTTACAAATG 2359 37 100.0 36 ..................................... AATTAAACAGAGGCGGAACCGCCAGTAAACTAGAGG 2432 37 100.0 34 ..................................... TTAAATAATTTTGCGTCTCTAAGCATGCCTGTCA 2503 37 100.0 35 ..................................... CCTTCCACCATTGTTGGAAAACTTCGCTCTAATGC 2575 37 100.0 33 ..................................... AGGGCAAGAGGATGTTTTTAAGAATTATCCTAA 2645 37 100.0 34 ..................................... GAGCAACGTGCTTGGCAGACTGATATGTCAAATA 2716 37 100.0 35 ..................................... TACCGAGCCACATATCGAAACCTCGTTTGAAGGGT 2788 37 100.0 33 ..................................... ATAATAGAATCATGAAAGAGTTTACGACTAAAG 2858 37 100.0 35 ..................................... AGGGAAGTAGGACGATTATAAATTGAATGTATTTT 2930 37 100.0 35 ..................................... AATCATATAGCCATGAATATGGCCATGTTCAACGA 3002 37 100.0 34 ..................................... CATAAATGTTGTTGTTGAGGCAATGTCATATATT 3073 37 100.0 34 ..................................... CATCAGAATCGTAAGGATTACGAAACGCTTGAAT 3144 37 100.0 35 ..................................... AGTTTATGGAAATCACGAGTAGCGACAGTTTCATT 3216 37 100.0 33 ..................................... TCATTCACTGCGTCTCTGATCATTTGACACTGC 3286 37 100.0 35 ..................................... AAGCGAGCCATCTTGAGGGAGATGGTCAGGGTCAT 3358 37 100.0 35 ..................................... CGTCCTACTTCCTTCGCCCCCCATGATTTTCCTGA 3430 37 100.0 35 ..................................... AATACATTGCCCACAAGGGATTTTTAAACCGGATA 3502 37 100.0 35 ..................................... AAACACGCTTGGAAGAACGCTTAGACAATTTAGAA 3574 37 100.0 34 ..................................... ATCATATAACCATGAATGTGGCCATGCTCAACAA 3645 37 100.0 34 ..................................... AAATCAATTTGAAATAACAATCAAAAATAAAATG 3716 37 100.0 34 ..................................... TCAGAAGAAGACTTTTCCTTAACAGGAGGGATGG 3787 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 52 37 100.0 34 GTTTCAGTTGCTGGTTGTTTAGGTTATGATGTGCTGG # Left flank : ATAAACAAATCAGGCTTCAAATTATACCAATACTCTAAAGCCTCATAAGGCGTCCTTACCTTAATCTCTTTTCTAAGTCCACCATGTCCACGATTAAAATTATAAAAAATCAAAAACTTGTTCAAATGATGCTATAAAGGTAACAATG # Right flank : GTCTGGCTTAAAACCCTTATCTAATAAGGATTTTAAAGGTTGAAAAATTGATGTTTTTACGAAGTTCATAAAAATATTAAAAAGTGTTAAATTTTGCGAAGTTTTTTGTTATAATTTCCACTTAGTGCCAGCACATCATAACCTAAACAGCGATGCACTGAAATCATCTAAAATAAATTTTGACCCGATCTCTGTATTGCACATATCGGGTTTTTTATTGTCTAAAATTCAGTGAGGATATTATACCATTCACCGATCATTACAATGGTTTAAATATTCACATTGTGTGCATTGTGCGGGGGTTGCGGGGCTATCTGGCATATAAGAATTGTCTAAATCAGATAAGATCTTATCTCTAATTATGACCACTTGTTGGATGCGATTTTTATCGAAATTAATTTGATGTGTTTTTCCTTTATTCTCATACAAAATAAATCCTATTTGACAGGGTAGATTATATTTTTCTTGCAGTAACAACCCATAAGCTGTGAGCTGCAAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTTGCTGGTTGTTTAGGTTATGATGTGCTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 1535-1865 **** Predicted by CRISPRDetect 2.4 *** >NZ_FQTR01000072.1 Bacterium endosymbiont of Bathymodiolus sp. 5 South isolate BCLUESOX, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================================ ================== 1535 31 93.5 44 ..T.................T.......... GCACCTGCGCTATGAAACATCGCTTGCATATTCGTCACTTTGCT 1610 31 100.0 44 ............................... ACATTGGCGTCCCAAAACATCCCATGTGCATTAGTCACTTTACT 1685 31 100.0 44 ............................... GCAGTTGCTCTATAAAACATTCCAGATATATCGCTCGCCTTACC 1760 31 96.8 44 ..........T.................... ATGGTTGCGTTATAAAACATATAAGATATATCAGTTACCTTGCT 1835 31 90.3 0 ............A.....G.....A...... | ========== ====== ====== ====== =============================== ============================================ ================== 5 31 96.1 44 AACATCCCAACTGCCAATATCTTGGTTAAAG # Left flank : AATAAGTCGCTAAGGTTAATGGTGTCTGCGTTAGATCTTGTTGTTGTATTGCCTAGCGTGAAGTCAGTAATGGCATCATTGCCTGCGTTTTTAAAACCGTAATCAAAGATATCTCTACCACCTGCACCAGTTAAAGTATCATTGCCTGCACCACCGATCAAGATATCATTTTTGGCGCTACCAGTCAGTGTATCGTTACCACCTAAGCCGTGTAGTGTGGTTTTTGTGGCAGTTGTGTGAAGTGTATTAGCGTTATTATTGCCCTTTATCGTTTTGCTGCCATCAAAATTGCCAGCATTAATAGTCCAGTGATAGGTGTCTATTAAATATTGTCTGGCAGTGGCATCGGTGTAGTTTGCGATACTCCAAGCAACATTACTTCCGATAGCGCTCTCACCAGCAGCGGTATCAAGCTTTGCCCAGCCACGCAAAGTGCTATCCATATTATTTAGAGTCATTGCACTGGCATTAAACATACCCGTTGCATTTTTTAAACTCGA # Right flank : GGCAGTTGCACTATAAAATGCTTTGTGTGCACCACTTACATGAGACACATCCCAATGGCTTAAATCCACATCAGAGCCTTTACCATCAATATCAACCGACTCTTTTAAATTGCTAATTTTGGTTGTATTTTTAGCGATGGCAGTATTAGTGTTACCAGTAACATCTGTAAAGGCGTTTGCTGCAACCGTAATGGCAACATTAGAATGCTTTCCACCTAGGTTTGGGGTTATCATAACGGTGTATTGAGTTTCACTGACTTTGGTAAATGAGCCCAAATTGATAGTGCCATTTGTAATGCCAATATCATCCACGGTAAATGACCCATCTTTAATGGCTGCACTAAAATTAAATGTGATTGTATTGGCAGCAGTATTTGCACCACCACTGCCTGTAATTATTAGGGTTGGTTTAATACCCTCAAGTACTAAGTTGCCATTAGCAATCAAACTGGTCAACAAATCAATTTTATAGGCAATATTTTTTAAAATAATGGTTACCG # Questionable array : NO Score: 2.78 # Score Detail : 1:0, 2:0, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACATCCCAACTGCCAATATCTTGGTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.50,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //