Array 1 9420-8668 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADFCB010000018.1 Moraxella sp. K1664 Contig_018, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 9419 28 100.0 33 ............................ TACGCTATTCAAAAACCCCCAAAACTCACTCAA 9358 28 100.0 33 ............................ TAGATGCAGAGATTGGTGCATTACTAGGCTAAC 9297 28 100.0 33 ............................ GATTGGTATTTTAATGCCCAAAAAGCCCCTGCA 9236 28 100.0 33 ............................ GCTAATCTCAATCGCTCTTTTGACAACTTTGAC 9175 28 100.0 32 ............................ AATCATACCCCTGCTAACCCTTGCTATATAAG 9115 28 96.4 32 C........................... CGATGACCTAGCAGATTATTTGCGAGATGATA 9055 28 100.0 32 ............................ TTTGTACTGATGTTTACCGTAGCCTTTATGCT 8995 28 100.0 32 ............................ TTACTGATAGCAAATTGGTGTTTGGTAGTACC 8935 28 100.0 33 ............................ AGTATCAAGAATTGGATAGGGGCAAGGCAAGGG 8874 28 100.0 32 ............................ TTGTAAACTCTTAAATGAGAACAACACCCATT 8814 28 100.0 32 ............................ GTAAAATCCAACTCAAAACACAGTGCCATCAA 8754 28 100.0 32 ............................ AACGGATATTGTGCGTTTTAATCGCATAGAGG 8694 27 89.3 0 ..........A..C..........-... | ========== ====== ====== ====== ============================ ================================= ================== 13 28 98.9 32 GTTCCTTATCGCATAGATAACTTAGAAA # Left flank : CGATAGCGGACGTGGGCGAGCGTGCGACAGGCTATGTGGTGGTAGAACGCCAACAGCGAGCGGGTTTGCAAAAACAAGCCGAGCGATTTGCCGAGTTTAAAAATCTGACGGTGGAGCAGGCGTTGGAGCATTGTTTGGCGTACAAAAAACAGCCAAAGGCGTATCCGTTTATTGAGCTATTCAGCCAAACTAATCAAGTGCCGTATCGGCTGTATGTCAAACAAACAGTCGTGGATAAGGCGGTGGACGGCGAGTTTACGGTCTATGGTATGCACAATCAAGGCGGAGCGATGACGGATAAGGCAACTGTTCCACATTGGTGATTGAGTTTGGTTGTGCTAAAATAAGGGGTATGATACAGGTTTATGCCCTTTATTTTTTGACTATTTAAAAACTTGATAAAAATCAACTACTTATAACAAGGCTAAAAAACATTGGGTAAATGCCCAAAATATGGCTTTAAGTCTTGATATAAGTGGGTTTTATGTTGTATAATTCTA # Right flank : TTGTATTGAACCGTATCGCAATACAACTCAATACAATCCACGCCGCACAGATAGCTTACAAAGCAAAAAAATGCTATAATAACCCACATTTTTCAAAGAATTAGGCGTATGCCAAAGGATTTTTATGAGCGAGCAACTTCCTACCAACGACTACAATGCCAGTAGCGTGCGAGTTTTGCGTGGACTAGAAGCGGTACGAGTCCGCCCTGGTATGTACATTGGCGACACCGATGACGGTTCGGGCTTGCACCACATGGTGTTTGAGGTGGTGGATAACGCCATTGACGAGGCACTCGCTGGGCATTGCGATGAAGTGCTGGTTACCATTCATGCCGATGAGTCGGTGTCGGTGTCGGACAACGGACGAGGCATTCCTGTGGATATTCACCCCGAGGAGGGCGTGTCGGCAGCCGAGGTTATCATGACGGTCTTGCACGCAGGGGGCAAGTTTGACGACAACAACTACAAAGTCTCAGGCGGTCTGCATGGCGTGGGCGTGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCTTATCGCATAGATAACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.50,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 10194-9322 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADFCB010000041.1 Moraxella sp. K1664 Contig_041, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 10193 36 100.0 27 .................................... GTTAAACGTTCAAAGAATGGTTGCAAA 10130 36 100.0 29 .................................... GGCGAGACTGCGTGCCGTGTGCGATGTGT 10065 36 100.0 28 .................................... ACCAAATCTTTATAATGCTCTTTTAGGT 10001 36 100.0 26 .................................... AAGTACTTTTAAGGTCTTAGGCGACT 9939 36 100.0 28 .................................... ACCTGTAAAATCAATGGAGAAAACCCAT 9875 36 100.0 28 .................................... TCTTAGCACAGGTCGCATCACCAAAGAT 9811 36 100.0 29 .................................... AGTGGCGTTGTAAAGTGTATGATGATTTT 9746 36 100.0 28 .................................... ATGGCAAAATCAATAACCCTAGCTTTTA 9682 36 100.0 29 .................................... AGATATGACAGGAGAAAGATATGAGTCAA 9617 36 100.0 30 .................................... GCAATAATGTTTATGCGTGTGAAGTGATTG 9551 36 100.0 31 .................................... AATTAGGTATTGACAAGCCCCAAAAGGTTTG 9484 36 100.0 27 .................................... ACTATCATTATAGTCGTGGTTTTTGAA 9421 36 100.0 28 .................................... ACAACTAAATTTCCCATAAAATCAATAC 9357 36 91.7 0 .................................TTG | ========== ====== ====== ====== ==================================== =============================== ================== 14 36 99.4 28 GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Left flank : TGGTTTTGATGTTGCCAAATTTTGACATACAAGCAAATGGAGAAGATGTATGATAATCGTCAGTTATGACATCAGTGATAATAAAGTGCGTGGACGATTTGCCAAATTTTTAATGCAATATGGCGACAGGTTGCAATATTCGGTCTATGAAATTCAAAACAGCGAACGCATTTTAAACATCATCACCGAAAAAATAAAAGCAGAATTTGAGTCTTTATTTACAGGAGCGGATAGCGTCATTATCTTTCGGTTTACAGAACGTGAAGTATTAAGATTTGGTCATGCCAAACATCGTAATGAGGATTTGTTAATTTTATAAAAATCCTTGGCAAAAATGATGAGGTTTGTTATAATAAGAGATCTAAATCACACCCAAATGTTTACTTTACAAACCTAAGTCTTAATGTGTGATTTATCATGTTTTGGCGGTAAAAATGATGATTTTTTGTACAAAAAACTTGCTAATTTCTCAAAAAATCATTAAAAATACCCCAAAACGG # Right flank : GCGTTTAAGATGATTAACCCCACTGCCTGTCCCGAAACGCTACTGCCGTGTCTTTGGCTTTTTTGATGGCAAGTTTGCGGTTATGACTGGCGAAGAGCTTTAACTGCCACAGTTTTTCTTGGTATAAGGTCAGATGGTCGCTTGGGTGCATGCGATTGATAAGGCGTTTGCTCGCCAGTACCGCATCAGGTGAGCGAGTGGCAATCTCATCGGCTAGGGCTTTGGCACGTGTCATCGGTTCATCATCGAGATGGGTGATGAGTCCGTAGTCGTAAGCGGTCTGGGCATCAAGTAGGCGAGCGGACATGGCAAGCTCTTTTAGCTTATCCTTGCCGATGTCTTTGGCAAGACGGGTCAATCCCATGTCAGCGACCAATCCCCATTTGGCTTCAAGTACTGACCATGTCGCTGATGGGTGGCTGATACGTACATCCGCCCCCATGGCAAGCTGTAACCCCGCCCCAAGGCATACGCCATCGACCACGGCAATCACTGGTACA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAACGACCTTTTAAATTTCTACTGTTTGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //