Array 1 12211-11121 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCOI010000052.1 Dorea formicigenerans strain DFI.1.58 JKPLGODO_52, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 12210 36 100.0 30 .................................... TGTCAAATATATTTCGTAACTTTTTCAACT 12144 36 100.0 30 .................................... CAGTACACACCGTTTTCCACGCGACCCTCA 12078 36 97.2 30 .........................A.......... TAAATGGGTCATGCATATATAAGTTGCTGT 12012 36 100.0 30 .................................... ATTTTCCACAGACAATTAATCCGGCAAACA 11946 36 100.0 29 .................................... TGGCTCAGGGTGGCTCGCATATCCGAAGA 11881 36 100.0 30 .................................... CCTGCTACATTACTCTACAATCACACTTTC 11815 36 100.0 30 .................................... GGGCGAATATACCAATAATTCCCATGATAC 11749 36 100.0 30 .................................... CTTGCTACAAGCCATAATTTTGCATCTGTA 11683 36 100.0 30 .................................... AACCCTGTTTTGTAATAATTTTCAACATCA 11617 36 100.0 30 .................................... CTTTTACAAGCCATACTGGATATACGGTAT 11551 36 100.0 30 .................................... TAACATATGCCCTGATACGTATCCACCGCC 11485 36 100.0 30 .................................... GTTAGCTTCCGCTTGCAGTCCTCTGATGTC 11419 36 100.0 30 .................................... TCGCCTTTGTTGAATCCTCATAGGCTTTCT 11353 36 100.0 30 .................................... CTTTTCTAATCATTTGATAGTCCATAATTC 11287 36 100.0 30 .................................... ATACACAAGGAAGTAATAAAAATGGTATTA 11221 36 100.0 30 .................................... GACCTCGCTCGGCTTAGTCTTCGTCTTCCC 11155 35 97.2 0 ............................-....... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 99.7 30 GTTTGAATTCCTTCCGTATTAACAAGACTCTCAAAC # Left flank : TGGCTCGCATATCCGAAG # Right flank : CTCAAATCCGGTTCTCGCCGAGTCGTTATCTTCTTACGATAGAAGGTTGTTAATACACAAGGTCCAGCACACAAAGATCTTTATCTATAATAATATATCTGTCACTTTCGATGGAGTCTGATTTTACTCCTTCCAGATTAATCAGATACATCTTCGTATAAAAACAGTGTTTATAGATTTCTCTCAGATCCTCGGTACTGAAATATTGCTTCAGATTCAACACAAAAACAATATCAACATTACAGATCTGCTTCATGGTTCTCAGATAGTCTATAAACTTTTCAGTCAGATTATCATAACAGGAATCCATATGTACATTACAATATTTTATCAGACCTGCTGCCTGAAAATCAACATCATATGTCAAATTATATTCGGAAGAACTCGTAACCTTATCCATAAACTGGATAACCTTCTGATTCACAGTCGCAAATTCTTCAAAATGATCTTCCAATATTTTTTCTGAAAGATTTTTATAAAGCTGAGATAGAATCCTTTTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAATTCCTTCCGTATTAACAAGACTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //