Array 1 141653-148190 **** Predicted by CRISPRDetect 2.4 *** >NZ_PYGF01000001.1 Cecembia rubra strain DSM 28057 Ga0181025_101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 141653 30 100.0 35 .............................. ATTGAAGGAAACCAAAAAGACGCTGCAGACGGATG 141718 30 100.0 35 .............................. ATATTTATAATCATGTAATGTTAACAGGGAATAAC 141783 30 100.0 36 .............................. GGGATTATAACCGATAAAACACAAGTGGATGGATGG 141849 30 100.0 34 .............................. TAACTGAGCCATCTGTTTCCAATGCTAAGTTCAA 141913 30 100.0 36 .............................. AGATCTGTCAGTCCTCCTGTGGATGGGCCTGGGCCA 141979 30 100.0 36 .............................. CTGATATCCTGTAATCTCTCCACCCTGATGTCCTCT 142045 30 100.0 35 .............................. AATTTTTCTTAATGGCCGGCTGATCACCGAGCGGC 142110 30 100.0 36 .............................. AGGCTTCTGAATCTCCATTCTTTTACCGCCCTTGTC 142176 30 100.0 36 .............................. ATGGTAATAGATGTTCCCTCCTCTATCCATATAACA 142242 30 100.0 37 .............................. TTTCTTAGGATTCTTACAGATTTAGCCATGGCCTCAA 142309 30 100.0 36 .............................. CCGTAAACCAGGTGCAGACATTCCCGAACCCCCCAA 142375 30 100.0 35 .............................. GTTCAAAAAAGGAAACCTCTATGTGCCAACCGAAG 142440 30 100.0 35 .............................. ACGATTTCAGCCGGGCTGTTTTTTTCAGAATCAAC 142505 30 100.0 36 .............................. CTGCATTTGCCGCAATTGAAAAACTTCAAGATGAAA 142571 30 100.0 36 .............................. TCCAGATACCTATCGATCTGTTGCTCAATTTGCCGG 142637 30 100.0 35 .............................. TGTGTACTTTTTAATCAGATCCTTAACAGCGGAAA 142702 30 100.0 36 .............................. CCGATGGGTACTACTATGTGGTTGGCACTGACATCA 142768 30 100.0 36 .............................. AAGAAAAATTCGCCCAATCGCTGATTTTCGGAAATA 142834 30 100.0 35 .............................. TTGAAAAAGCAAACATTAAATTAAAAGAAGATGAG 142899 30 100.0 34 .............................. TGGCATTAAGCATTTCCTTAAGAGCAATTTCGGA 142963 30 100.0 35 .............................. ATCTTAGAGGCAATTTGTAAAGAACGCCCCCCTTT 143028 30 100.0 34 .............................. ATCGGAGATGGCGCAACAACAATAACTGACTTAA 143092 30 100.0 37 .............................. AAAGGATATATGACCCTTGATAAGTCAGACTTACAGA 143159 30 100.0 35 .............................. AGGTATGCAGAATACAAGTTTCTAAACAACCGTGT 143224 30 100.0 36 .............................. AAGCCAAAATACAGTGATATTACGGCAAATGGATTG 143290 30 100.0 36 .............................. ACTTTTATTGATGCTTCTTTCAATGATAAGTACTTT 143356 30 100.0 35 .............................. AGAATTGGATAATGAGATAAAACAATTGGATGCAA 143421 30 100.0 36 .............................. TGCTTTGCAACCGATCCAGCAGATGCCGAAGCAAAA 143487 30 100.0 37 .............................. AAGCAAAGAAGAATCTGGAAGCTGCCGATGCGATTAA 143554 30 100.0 37 .............................. TTGTTTTGTTTTCAGCAGTCTGCCCGGTTTGGGCTTC 143621 30 100.0 36 .............................. ACAACATCCAGCGCATCGGATTTATCATCATAACTT 143687 30 100.0 35 .............................. TACACAATCAATGCCCCCGTACTATTTATAGTACA 143752 30 100.0 36 .............................. GAAACGCTGTAGAGAAAAAGTAATGACAAACCTAGA 143818 30 100.0 35 .............................. AAGCATCATGCAAGGTGCTTTCATCCCTCTTGGTG 143883 30 100.0 36 .............................. ATAATCGGATACCTGCTTCATTCTTACAAGACAAGC 143949 30 100.0 37 .............................. AATCGTATTAAAATAAATTACAAGTCAAGATATTTTG 144016 30 100.0 36 .............................. ACACCTAAGATAAACATATTCGAAATCGGGGAACAG 144082 30 100.0 35 .............................. TTGTCCACAATATTCCAGATCCTGCCCTTGTAGCC 144147 30 100.0 36 .............................. AGTTTTTCCCGCACCTCTTCCACTTTGGCCCTCCCG 144213 30 100.0 36 .............................. GCAATAGCGGCATTCAGTATGCCAATTGATGCCCAG 144279 30 100.0 36 .............................. AGGTCAACCATGACATTGAGATCAATTTTCTAATTG 144345 30 100.0 37 .............................. ATGGCTAAGCTTATTTACATTAAAGTCATAGAGGACG 144412 30 100.0 35 .............................. ATGGCATGAACCAATTGTCCAAGGGAGGAAAAGAA 144477 30 100.0 35 .............................. ATCTTTAATCTTAACCCTTATTTTTTTTGTCTTTA 144542 30 100.0 36 .............................. GGAGTTAAGGGATGCGGCAAAACAGGCCGGATTGGG 144608 30 96.7 37 ..T........................... AATATTGCCCTTGAAGGTTTCCTCGATTTTCCCGAAA 144675 30 100.0 35 .............................. CCAGCTTTAGACATTCTTACCCCAACCCAAGATGA 144740 30 100.0 35 .............................. TTTTTGTGTTTAGGGATTTTTCCTTCTTTCATGAT 144805 30 100.0 35 .............................. AGGGTAAACAATGGAGGGGTTGCGGCTGCAACAAG 144870 30 100.0 35 .............................. GTTAATCTCATCTTCGCCTCCTCTTTTTGCCGGAA 144935 30 100.0 37 .............................. CAGTAATAGGAAAACTGCTTTCCAGAACCTACACTTA 145002 30 100.0 37 .............................. TGAACATTACCTTATTGGCGAAATTTGATTTTCCTGT 145069 30 100.0 36 .............................. TACATTTTTTCCGACCATTTTCGGCTTTTTCGGTTC 145135 30 100.0 35 .............................. ACTCCCACCCTATTTTGAACCTAGGATCCTTTGCT 145200 30 100.0 36 .............................. GTAGTCCATGGCTAATAAGAAGCTTTTAAAGGAAAT 145266 30 100.0 37 .............................. TTATCACTTAATAATGTTTGGAGTCCAGAACGCCCAG 145333 30 100.0 35 .............................. ATAACCTGGAGTGCATTTTCATAACTTCCGATTGC 145398 30 100.0 36 .............................. AGTGATTTAGATAATTATCCGTTTCACCCGTAAGCT 145464 30 100.0 35 .............................. TAAGCAAAGCCACCACTATAATCACTAACACAACT 145529 30 100.0 36 .............................. ACGTAAGGGCGAAGTTTACGGTACTTCCCGAACCAT 145595 30 100.0 36 .............................. ATAATCGGCGAATCCCTTTCCCAACTTGGCCAGAAA 145661 30 100.0 36 .............................. ATCTTTTTCTGGAAAAAGCCGCTTAGAGCGTCGATG 145727 30 100.0 35 .............................. ATGCCAAATCAGGAAATAGAACTCAGCACAATAAG 145792 30 100.0 36 .............................. TATATTACAACACCCCGGCGGAACTCGAAGCTCTGG 145858 30 100.0 35 .............................. AACTTATCCAATTTTTCCAACTGATCTATAGGAAA 145923 30 100.0 36 .............................. GCCTCGGTTGCACGATTGTCATTTCCACGCGTTCTA 145989 30 100.0 36 .............................. TATATTTCGTCCTTGTTATAAACGTGCCTTACATAT 146055 30 100.0 36 .............................. GTGAAAATCTGAACCTGTCTTTTTTGCGTCTCGATA 146121 30 100.0 35 .............................. CCGCATAATGTTGATGAATGGCATATTGGAGATGC 146186 30 100.0 36 .............................. TATTTATTAAGGCCGTGTTAAGGTCCGAAGCGGTTT 146252 30 100.0 36 .............................. ACGCCATGACTATATTACCGGAATGGGCGAAGGGGC 146318 30 100.0 38 .............................. AAGAAAAGACAGGCCCCAACAGTTGGGAAATAATTAAA 146386 30 100.0 36 .............................. TATTTAAGGTCCTGGATCTTGTTTTCATTCTCAATG 146452 30 100.0 35 .............................. ATGTATTTTGTTGATGAAAATGGTAATAGAATAGC 146517 30 100.0 36 .............................. ATGTAAGGCCTCAGTTTACGGTACTTTCCGAACCAT 146583 30 100.0 35 .............................. AAGAGTTTTATAAATTGGAGATAATTAGACTTGGT 146648 30 100.0 36 .............................. ATCCCTATGGCCCCAACGACCTTGCCGGAGCACTGA 146714 30 100.0 37 .............................. TTGATAAACTTCCGTAAAGCAAGATTTTTTGGAGTAG 146781 30 100.0 36 .............................. AAGACAAACAATGGATATTAATAATAATTCAAGTGT 146847 30 100.0 35 .............................. GTGCATATAGCTTATACAGGAGGAATGCATCAGGA 146912 30 100.0 36 .............................. CCTGTTCAGAATCAAGCATATTCATCTGGTTTTTTG 146978 30 100.0 36 .............................. AGTACGCCAGCTAATAGATTTGCTTTACCCGGAGCA 147044 30 100.0 36 .............................. TTTTGCACCCGGTTAATATCGCTTATTTTAGCTACA 147110 30 100.0 36 .............................. TTGGCAAGTACCGCAAGGGTGCCAATAGAGCCTACT 147176 30 100.0 36 .............................. TTTACTATAATAGATTATACAAGTGTTGAAGCTATT 147242 30 100.0 35 .............................. GCACTTGGGAAATAAGCGCCGAGGAGCTTATAAAA 147307 30 100.0 35 .............................. TAAGTTCGTTTTCTGTCTCCGCCTTGTCGCTTAGG 147372 30 100.0 36 .............................. TATATTTTGCCGTGCGTTGCAAATACATCTAAGCGC 147438 30 100.0 36 .............................. TCGGTTAGGTTGAATGCCCGTATTACAGGCAGCTCT 147504 30 100.0 36 .............................. AAGCTTTCGCTAGCTTCTTTTGCTTTTTCGATTTTT 147570 30 100.0 36 .............................. CATAATCCTCGTCCACAACCGAATATGTTTCATCGG 147636 30 100.0 34 .............................. ACCAATATCTGCCTACCAACAAGGAACCCCACGT 147700 30 100.0 36 .............................. AGTCTTTTGCCTGCATTTTGTCTGATCTTTCGGTTT 147766 30 100.0 36 .............................. TGGAATGGCAGTTGCAGGATTGGGAACAATAGGTGC 147832 30 100.0 35 .............................. AACTTACAAAAGATAAATCCATAAATCAAGGCAAA 147897 30 96.7 36 ...........G.................. TGGATTATACCTTTTGCGAAATTAACATAGGTGTTT 147963 30 100.0 36 .............................. GAGTCATATATCCTTTTGGACTGATCGGGACCGAAT 148029 30 100.0 36 .............................. GTTTCTTCCAGGGGTTAACATAGTGTCGCCCACTCT 148095 30 96.7 36 ............A................. TTTTTAGCACCTGACCCTCCGTAAATTTCTCCTACT 148161 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 100 30 99.9 36 CCATCAATCGCACCATACAGGAATTGAAAT # Left flank : AATTAGTCAATAAGTCAGTTTGATATGTATGTTATTTTAGTATATGATATTGGTGAAAGGCGTGTGATCAAAATGCTGAAATTATGCAGGGAATACTTAAATTGGATTCAAAATTCTGTGTTTGAGGGAGAAATAACAGAGGTAAAACTTAAAGAGTTGATTTCAAGGGCCAAAAAATTCATGAAAGAGGAAGAGGACAGTTTGATAATATTTAAAAGTAGGGAGGAAAGATGGCTTGAAAAGGAAATAATTGGTCAGGAAAAAAATGATCTTGATACTTTTATTTAAGGGATTTGGTCGTCAACCTTCAAGTTTTTTTAAAAAGGCAAATGAAATCTTAGAATTTTTTTTCAAAAAACAGTGATTTTGTAGTGCAATCAAGGTTGTCAAACCCCAGTCAAAATCGAGGTATTTGAGGTCGACGATTAAAGTATAAAAATTTCTTTAGCAATAGGCCTAATTTTTAAAAATTAGACCTATTTTTATTGCCAAGGCCACGG # Right flank : TTTATTTTGATTTATATATTAATAATGAGCATGGCCATTAACTACAAAAAATTATTTTAAATCACTAAATTCTAGATTTAAAACTTCTTCATTTAATTCCATTTTAAAATAATACGGAGTCCACATTTAATAGATCATTCTTATTAAGTGCTAAAACCTCATTTTCTAATCTCCAGAAATCCGAATTATATCTTAATACCGTTAAAATTATTTCGAATGTTATTGACTTTGATCTATAATTTTGAAAATTATTATTGAAAAATTAAATGTCATTTTACTAAACCTAAAGGCATGGAATTTCAAATTTCTCCTATCTTATTTAACAAATTTAATCTTGTTTTTTTGTGTCAGATTTTTGTACTAGAAACAAAATCAGGAGAAGTATTTTCCAACCTTTTGCTCCTAGTTTAATTTATTAAATGCTTTTCCAAAGCAACAATCCATTTAAAATAACCTTTAAGAAAAATTTAAAAAAGGGGGGGGGAGCTTACAGCTGTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCATCAATCGCACCATACAGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA //