Array 1 8492-5863 **** Predicted by CRISPRDetect 2.4 *** >NZ_SWOJ01000041.1 Clostridium sporogenes strain IFR 18/045 contig00041, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================================================== ================== 8491 29 100.0 36 ............................. ATCTCTTACATCAATATAAGTAGGCATGTGAAGCCC 8426 29 100.0 37 ............................. AAGCCAACAAAAGTGGCTATTGGGGTTTGGGATAAGA 8360 29 100.0 37 ............................. TAGATGATTTTGGGAACATATCTTTTTTTATGCATTC 8294 29 100.0 37 ............................. ATTACCACATACTTTACTCATTTAATCACCTCTATTT 8228 29 100.0 38 ............................. CCATCTGTAAATAATAAAACTATGTTAGTTTATATTAA 8161 29 100.0 36 ............................. CAATTCTTCAGCAGCTATAGAGTCATAAACTTTACA 8096 29 100.0 40 ............................. CCCCGATACAGTTGGGGCGGGGAATTTATTAGGTTTGAAA 8027 29 100.0 72 ............................. TATCTTGTACAATCTATAAAATGGTTGTTCTTATCTGTTTATAAATTGCTTTTTAACATGCTCTTTTGGAGT 7926 29 100.0 38 ............................. CCCCTAGTGTAACTATTACACCACCCCTAGTGTAGATT 7859 29 100.0 36 ............................. TTAGATTTAACTAAACTATCAATTATCTCAGCTTCA 7794 29 100.0 38 ............................. TTACATTTTCTTTATATATTTTATATTTCTATATATTC 7727 29 100.0 37 ............................. TCTATCTTTAATGATATTATATCATTCATATTAGCCA 7661 29 100.0 37 ............................. TGTTGATTACCACCAACTTTTATTACATCAGCATTCC 7595 29 100.0 37 ............................. TTACTTTATTTTCTCTTTTATCACATTAATATCTTCT 7529 29 100.0 36 ............................. TTATATAAATATATTTATTGTGAAATCTTCCATTGC 7464 29 100.0 37 ............................. AATACTTTAATAAGTATCTCTCTAACATCTGCTATTT 7398 29 100.0 36 ............................. TCATAGAAGGCTACGGCTGCATTTGGGCTAGCATGA 7333 29 100.0 36 ............................. ATATATAAATATTCTAATATTTTTTCATGCTTATTA 7268 29 100.0 37 ............................. TTATCTATTGCGGTACTTCTTGCTGTGTCATCTGCTA 7202 29 100.0 36 ............................. ATGATTTAACTGTTACAAGAGGATTTGGTGGAACAA 7137 29 100.0 36 ............................. ATTATTGAAACACATTTTTCTTTATTCATAATTAAA 7072 29 100.0 37 ............................. TACTCTACCAGACTTTTTATAGTCTACACCTTCTATT 7006 29 100.0 36 ............................. TGGAACATTTCACAATTACTATTGATGCAGTACAAT 6941 29 100.0 37 ............................. CTATCTTCATATGCTAATACTTTTAAATGTTCTAGAT 6875 29 100.0 36 ............................. AAATCAGAATACATTCTTTTATCACTTTCAGATATT 6810 29 100.0 37 ............................. TAAACTTAGTTTTAGCGTGGAATCCATTTTGATTCAG 6744 29 100.0 37 ............................. TTAGAATGAATGGGTTTAGATATACTATAAAAGAAAA 6678 29 100.0 37 ............................. GAACAAATAAGAGATAAATTAGGAACTCTTATAGGTA 6612 29 100.0 37 ............................. GGGGAAATTAATATGAATGCATCAAAGGTTAAGGCTA 6546 29 100.0 36 ............................. AATGAAACAGCATGGAAAAATGGTACAGGTGGAATT 6481 29 100.0 35 ............................. ATAGTATCTATAAATTTAATTGTTACTGTATAATT 6417 29 100.0 38 ............................. TAGGGTGTACTTATTTTCTTACTAGAATCTTCCTGTTG 6350 29 96.6 36 .........................G... AGTGATGCGTTTTATGTTGTTTATAAATCAACCATT 6285 29 100.0 37 ............................. GATTATGTAGAAGCTTATAATTGGGGTAAAGTTCCTT 6219 29 100.0 37 ............................. TTATTTTTTCACCTCTCTATTTAGTGACATGTTTTGA 6153 29 100.0 36 ............................. AAAGTCAATTCTGCTGAATTGTATGGAGATGATCAG 6088 29 100.0 36 ............................. GCATTAGCCATTAATCCAAGAGCAAAAGCAGTCTCT 6023 29 100.0 37 ............................. ATAGGTATATATCTAGGTACTTTTATACCTATAGTGT 5957 29 89.7 37 .............A......G..A..... CATGTTTCATCTATCATTAAAGCATGCTAAACAATGG 5891 29 82.8 0 A..C.............A.GA........ | ========== ====== ====== ====== ============================= ======================================================================== ================== 40 29 99.2 38 CTTTTATATTAACTATGTGATATGTAAAT # Left flank : AGGTGATGCTATATATAAACCATTAAAGGCTTGGTGGTGATAATTTATGTTTGTTATATTGACATATGATATAGAAGAAAAGAGAATTAATAGAGTTAGAAAAATGCTAAAAAAATACTTAGTTTGGACTCAAAATTCTGTGTTTGAGGGAGAAATAACAGAAGGAAAGCTACATAAATGCCTTTCTGATGTTAATAAATTAATTGACAAGAAGTTTGATTCAGTATATGTTTATAGAGTAAAAAATTCTAAAAATATAAAAAAGGATGTAGTTGGAATAGAAAAGAGTTTTGATGAATTATTTTTGTAATTAGTTTTGCATTAAACCTAAATTTAAATTAATTAAGGTTAAACTATTGAAATTACTAGCTTTCTTGACAATAAAAAATAAATACTAAAAACGCTACTGAAGGTTTACTGCAAAATGTGGAAAATATGATAGATTAAGCATTGCTATAAATACAGTAATGGCGGTGGTTACAGGCTTTTTGAATTTTAGG # Right flank : CAATATGCTGTGAAGTCTTTTTTTGTTATACCAAGATTCTATATACTCAAATATTGAGAACCTAGCGGTATCAAAATCATAATATGTAGCTAAATTTACTTCTTCCTTCTTTAGTGAAGCGAGGAAGGGTTCAATGTAGGTATTATCATAAGGACAATTCTTACCGCTGAAAAGGTGAATTATATTAATTCCTTTAAATATGCTTAACTGTTATCAAGCTTAATTTAAGAGTTTTGGAAAGATTTATGCTAGATTGCTGTAAAATTAATAAAGGTAGAAAGAAGTCTGCCTTGATTTTATCTGCTTCTATAAGTTTGTATATTTATCCTATGAAGGATTTTAAAATTTATTATAGAATACTTAGTGTAGTTAATGAATGAAATTATACATAATCTAATAAATTTTTTCCTAAATAAAAAATAGTTATTTATTTAGGAAAATAAACAGGGGGTTATACTAATGAAGATAATAGTTATTGGACCTAGGGGAAAAATGGGGAG # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTATATTAACTATGTGATATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: R [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //