Array 1 6678-6873 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BNMA01000014.1 Helicobacter pylori strain JP0100 Contig14, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence          	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	=========================	===================================	==================
      6678	    25	 100.0	    29	.........................	TGTCGTTATTGAAGCTGGCGTTGTCAGTA      	
      6732	    25	  88.0	    32	..A........G............T	TGCTGTTTTCAAAAACAGATTGAGCGCTATTA   	
      6789	    25	 100.0	    35	.........................	TGCTGTTATTGAAGTTTAAGTTAGCGCTGTTAGTG	
      6849	    25	  84.0	     0	..T..G.................GT	|                                  	
==========	======	======	======	=========================	===================================	==================
         4	    25	  93.0	    32	AAGTTATAAGTCCCTTGATTGAAAG	                                   	       

# Left flank :   AACTTTGAGCGTCTTTTTTGATAGTGGTGTTTTGATTGTTGGTGTAGCTTGTGTCGTTGCTTGCGATCTTATTATCACTAGCAGCGTTATTTAAAGCGGTTTGGGAGTTACTCAAGTCTTGTTGGTAGGTTGCTTGGGCTTTGGCTTGTAAATCATCCCCTAAAAATTGGGTGGTAATGGACTGATTGTTAAAGGTTTCTTGTAAGGTTTCATCTTGCCCGTTAATGTCAAAGGTTACATCATAAGTGTTACTACCCACTTCAACATGGCTTATGGCTTTATCGTCCTTATAGTTGATCAAATCCCACAAATAGCTTTGATAAACCCCATACTGGATGGTTTTGTTTGTGGTGAGAATATCATAGGTTTGATTGGCATTAAGGGTTTGATTGAGGTTAAAAATCGCACCAGAACCAAAAGACACACTGCCTTTAAGACTAGCAAAAGGCGAACTTGAATTTAAAGTGTTAGCGCCTGAAAAACTCACCTTGCTTGCATTA
# Right flank :  TTTGTTTGATTAAAAGAGAGATTGCTGTTAGCCCCATTCCCGCTGAAACTAAAGCCCCCATTGGTGTCGTCTGTAAAGATAGAAGCGCTCACATTGATGTTAGAACCGCTGAAATTCATGTAAGAGTGCTGTGTTCCTGCATCGCTATTATCAAAGCTGGCTTGATTGATAGTGATATGGTTAGCCGCATTAAAATTGAGAGTGACCCCACCGCCAGTAGAAAATGAGTTGCCGGTTGTGATACGGCTAGAATCAAAATTAATCGTTTGAGCGTCATAAGTGCCTGTGATATACCCTACATTACCCCCATTAACACCTGTGCCTCCAAAGCGGATATTCCCTCCCACATTAAGCGTGCCATTATTGAATTTTTGTGTGAAACTAGCCCCACCAGGGCTATAAGTGGTAAGGGTGTTCAAATAATAAGTCCCAGAGCCTTGAGTGCTGCTAAAAAGACAATAAGAGTTGTGTGTGGGGGAATCAGAACCGCTTTCAATATT

# Questionable array : NO	 Score: 5.51
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AAGTTATAAGTCCCTTGATTGAAAG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.20,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [3-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : NA
//