Array 1 100590-100773 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIKLF010000005.1 Murdochiella sp. Marseille-P8839 NODE_5_length_142705_cov_16.8962, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================== ================== 100590 24 100.0 29 ........................ CGAAATGGGGAAATGCCCCGTAAAGTATG 100643 24 95.8 29 ...T.................... AAAAATGGCAAAATGCCCCGTAAAGCGGC 100696 24 79.2 30 T..T.........A.GC....... CGAAAGTGGCGAAATAACCCGTAAAGTGGT 100750 24 100.0 0 ........................ | ========== ====== ====== ====== ======================== ============================== ================== 4 24 93.8 30 CGGCGAAATTACGGGTTAAAAACG # Left flank : GGCGCATTATCGCGCTGGATATGGATAAACTGGCGTCACGTCTTGCCGACCGCGACATCACCATTACCGTGGAAGAATCGGCAAAAGACTACATTCTGGCGCAGGCGTATTCGTCGCAGTTCGGCGCGCGTCCGATCGAGCGCTATCTGCAGAAACACCTGCAAACAGCCTTGGGTCGTAAGATTCTGGAAGGTCAGATTGCTGACCACGATCACGTTGTGATTACCGCGGATAACAGCGGGTTGGTGGTGACCGTCAAAACGGATGCCAATGACCTTAAAATGCAAGTCGAACCGCGTCCTGTCGCCGAGAAAGCGTCAGAAGATTTTCATAGCGATGACACCGACGAGGTGGTGGAATAACGTGGGCGCTCGTACAGAGTCAGCCTGCAGCTGGCGGGTCAATAAGAAGTAGCGTTACTTTTACGGCGCAGTTAGATAGAAGTGGAGGGCGGCCCGGCGGGCCGCCTTCTTTTTTGTATGCAGCAGGCGGCCGGTGGC # Right flank : GAAAAATAGCGAAATGCCCCGTAAAGTGGCCGGCCGTTCCCCGGATTTCCATTCTCATAGCGATACACCGCATTAGCGGAAGGTGGTAAAATGAACCAAATGCAAGAAAAGAGGTTGTTATGATTACTATCCCTTCCGACTACGTGCCCAAGCTGGATCATTTCGAGTTGCAGCGCGCCATTGATTACGTCAAAAAGACCTTTCAGGCAGAGATTTCGCAGGCATTGAATCTCCAGCGCGTTTCCGCGCCGCTCTTTGTGCTGCGTGCCAGCGGCCTAAACGATAACTTAAGCGGCAAGGAACGTCCGGTTTCGTTTGATATTCCCGATGTGGGCGCTGAAGCGGAGGTTGTGCATTCCCTGGCCAAGTGGAAGCGCATGGCCCTTGGTCGCTACGGATTCGAACCCGGTCAAGGCCTTTATACCGACATGAACGCCATTCGTCGCGATGAAACTCTGGATAATCTCCATTCCATCTATGTCGACCAATGGGATTGGGAA # Questionable array : NO Score: 2.55 # Score Detail : 1:0, 2:0, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGGCGAAATTACGGGTTAAAAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 216302-216934 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIKLF010000002.1 Murdochiella sp. Marseille-P8839 NODE_2_length_261290_cov_17.0895, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 216302 32 96.9 37 .............G.................. ATCGTGACCGACACTTTTGTCTTTCGTCCTTCTCCCG 216371 32 96.9 35 .............G.................. GCCTGTAAGGCTTGTTTCGCATCCATCGTCATGCT 216438 32 96.9 33 .............G.................. TTTTCTGTCCGAACCATCAGCTGTTTTCCCCAG 216503 32 96.9 37 .............G.................. CATGATATATACCGCAACTCGCCCGGCAGAGCTTTTA 216572 32 96.9 34 .............G.................. GTTTTTGGCCATCCGTTAAGGCCTGCTCGTTTGA 216638 32 100.0 34 ................................ TCTGTCCCCTTCGGGTACTTGTACTCGCTTGTAG 216704 32 100.0 35 ................................ CCTTACCATTACGGACCTGCAGGACCTTATGGCAA 216771 32 100.0 34 ................................ CTGCACCTCTTTAATTGACCAGCCTGCTTCAAAG 216837 32 100.0 34 ................................ ATAGAGCGCATCGCCTATCGCTTTTGCAAGATCA 216903 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 10 32 98.5 35 GTCGCGCCCTTCACGGGCGCGTGGATTGAAAT # Left flank : TGCAAGCGATGCTATTGAGTCGTACAATACGAGGAGACCTAGAAAGCTATCCTCCTTTTGTAATGCGTGCTTAGGAGGCAAATATGTGGGTTTTGATCACTTATGACGTCAACACAAAAAGTCCGACGGGCGAAAAAAGACTTCGTCAAGTAGCAAAAGCGTGTGTCAACTATGGCCAGAGAGTGCAGAACTCCGTTTTTGAGTGTAGTGTGACGCCGGCTCAGTTTCGTCTTATTCAAGACAAACTGTCTAAGATCATTGACAAAGAAAAGGATAGTGTCCGTTTTTATCGCTTGGGCAAAGAAGGCGATCGGAGAATCTCATCGATGGGGAAGAACGATACCTATAACCCGGATAAGGACCTCCTACTCATGTAAGAACCGGCGATGCTCATAATCTAACGCTAGGTTCGCGTGTTCTAAGACCGTTTTTTGTTTTTTTTTCATGCTATAATTAATGCAAACATTAAGTTTTACCGCAAAAAACGTTGCAATTTTGCG # Right flank : TTGCATCCATCCCATCTTTCTTCTTTTCCAAACGTCGCGGACGTCGGCATCGTCGGCGATCTCTTCCAGATTGTGCCGAAGCTGACCGAGAAGGTTAAAGAAGACCGCGCGAAGAACGCGGAGCAATAACAAAGTAGTCAAGGTCATCGAGATGACCTTTCGCAAAGAAAACCCTGCGTGCCGATCGGTGCGCAGGGCTTTTTGCTTTATTTTTTGTGATTGCTACGCTTTCTTTCGTCTGATAGAGTAAGTTGAAGTATAAATGTGAAAAGGAGACAACATGAAGTATCATCACGCCATTGTTCGCAAACCTGCTCGATCCATGGTTGAAGGCATTACGACCGGCATGTTCAGCACGGAAACGCCGGTATATGAAAAAGCACTGTTGCAGCACGATGCCTATGTTTCCGCACTCCAGGAACTGGGCGTGGAAGTGCTGGTGTTAGAGCCGTTGGAACAATATCCCGATTCATGCTTTGTGGAAGATCCGGCAGTGGTCA # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTTCACGGGCGCGTGGATTGAAAT # Alternate repeat : GTCGCGCCCTTCAGGGGCGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.10,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,1.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //