Array 1 2320943-2318531 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP064316.1 Lacticaseibacillus paracasei subsp. tolerans strain MGB0761 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2320942 36 100.0 30 .................................... TCTTACCCTTGTCGCCATGAGTAGCGCCAA 2320876 36 100.0 30 .................................... GTCTGTCGCTTAAGGATCAGCAAGCAATTG 2320810 36 100.0 30 .................................... AAGAAAAACGTGACTTATACGAGGCTGCGT 2320744 36 100.0 30 .................................... CAATCAAGAACTTTTGGAACGGCTGAAGTT 2320678 36 100.0 30 .................................... ATTCCGATCAGGCTGTGAAGTCAGTCAGTG 2320612 36 100.0 30 .................................... CAGTAGCAACATAAACCCTAGTACCAATAA 2320546 36 100.0 30 .................................... CAACCTTACAGAAGTTCTTCAAGAGCGGTT 2320480 36 100.0 30 .................................... GGACGAGCAAATCTAACCGCTTCGGGCCAA 2320414 36 100.0 30 .................................... CCGAAGGATAAGCCAATATTTGTACCAGAC 2320348 36 100.0 30 .................................... GACTTCGAATGCTGAAGAACTAGCTGATCA 2320282 36 100.0 30 .................................... GGGGCACCTCGATATACGGGTACCCCATCT 2320216 36 100.0 30 .................................... CGAATTTAAGACGATGAAACTGCCGTATGG 2320150 36 100.0 30 .................................... AGAGTTTATTCAGCATGATAGTACCAAATT 2320084 36 100.0 30 .................................... TCAAATAGCCTCTTCGAAAGTTAAAGGAGG 2320018 36 100.0 30 .................................... AGCGTGGCGTAGCGCTAACTTGTCATTTTT 2319952 36 100.0 30 .................................... TATTTCGCACTTCCAAAATCATAGCCATCA 2319886 36 100.0 30 .................................... CGCCTGAACATTGCATCGATGGTTTGATCA 2319820 36 100.0 30 .................................... GTTGGTGGCAGCGATTCATTGCTGACGTCC 2319754 36 100.0 30 .................................... AACAATTGAAGCGGTGGAAGCTATAGCCGC 2319688 36 100.0 30 .................................... TCGACAATTGTGACACGGGTTTCAACGTCA 2319622 36 100.0 30 .................................... AACGGTGCTGCCAACTGGGTGCTCGCGCGC 2319556 36 100.0 30 .................................... CTAACCACTGGACTGGCTGGAGGGGTCGCC 2319490 36 100.0 30 .................................... CATCGTACCCTCACAAAAGCTAACGCCGGC 2319424 36 100.0 30 .................................... CTTTTATGAAGAACTGTTTACACCGGTTAT 2319358 36 100.0 30 .................................... TCTTCAAGGTCTTGTGTGGCAATAGCGTTT 2319292 36 100.0 30 .................................... TCAATATAACTCGCATCATAATCAAGATTA 2319226 36 100.0 30 .................................... GGGATTGTGGGCTGACGATAGATATACGCT 2319160 36 100.0 30 .................................... CTAACCTTGGCTGTGAATACTGGAGGCGTC 2319094 36 100.0 30 .................................... GTAAAACCATCATTCGTCTTGGAGTCAATC 2319028 36 100.0 30 .................................... CATATTGACGTTGTGAACGTTGCATTTCTG 2318962 36 100.0 30 .................................... CTTACGTCAACGGTTATACCGTGCGCAAGG 2318896 36 100.0 30 .................................... AAGGGTTAGCGCCACTTAATCCTGACAACT 2318830 36 97.2 30 ................................A... AAAGGCTTACGTTCAGGCGATTGAATCCGG 2318764 36 100.0 30 .................................... ACCCAGTTTCCTCGTTGCGCAGATGTTTGT 2318698 36 100.0 30 .................................... CCGAGAAGGTCGGACGATCAACTACTTTCG 2318632 36 100.0 30 .................................... AGGAAATTCGAGTTCTTCCCGCAATTGATG 2318566 36 83.3 0 C.............C..............G..TTC. | ========== ====== ====== ====== ==================================== ============================== ================== 37 36 99.5 30 GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Left flank : AGCTTGATCTAGATAAACTTTTTCAACGTCTAATCTATAAGAGGATGGAGTTGTTGATTGAGAATCAGCGGCTTGTCGAACTGATCGATCAATCGCAACAAATGGCGATGTATTTACTTCAAGATCCATTTTTGAGCGACTTGCCAGTCACGGTTGAACCAGGTGGTAAGCTTGAACAAATCATGAAATACTGCAACGTTCATTTTGATGAGGCTGTCACGACAGAGTCAATCTCGAAGATTGAGGCGCTTATTCAGACGTTAACTAAATTGGAGGAAAAGAAACTTGTCATTCTTACAAATGTCAGTCATTATTTAAGTGCCAGAGATTTCTTTGCGGTGACTGAACAGATCGGCGATACAGAACTTCAGGTCATTCTCATCGAGTTCTCAAAAGTGAACCGAAAGAAATACTTTGAGAAATGCCAGTATATCTATATTGACGAGGACTTCGTTGATAGTCGTGAACTAGATTGATTAGGAGATTGTGTGAAAACAACG # Right flank : AAACAGCAGTGAGACTAAACTGAAGCTAAACTTGTCAAAAAGTGCCTCATTTTGTGACAAAATAAGGTGTTTCACTATTTATTGTGTGAACCAAGCCTCAATATTTACAAAGCTGAACCTTTCAACGTTCAGCTTAAAAGCCGCGTCTAAAGCAATATCGTAGTAACCACATACACTCATGCGGTGATATATCAATCAAAAACTAAGTGCTATCTAACTCCTCTTGTGATAGAATTCATTATATATGAAATCGCTTACACAACGAGGAGGAAGAACGACATGAAAAAACTAATAGTGCTCAGCGCCACACTTTTGGTCAGCATGGGGTTGGCCGCATGTAGTAGTGGATCGAGCTCTAGTTCGAGCAAGAGCAGCAGCACGACTAGCCAGACGAGCAATGCTAAGGTGAAGATTAATACCGGCGCCGATGCGAGTGCCAAGGTGCCGGCAGCCGGCACCTTAGTGATGCGTCAGCTTTATGCTGCACCACACGGCAAGCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCGAATCAATCAGTTCAAGAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //