Array 1 289589-289434 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBK01000002.1 Streptomyces viridodiastaticus strain JCM 4536 sequence002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 289588 33 93.9 28 ..............................A.T ACGCGACCACCCTGCGCGACATCGGCAA 289527 33 100.0 28 ................................. CGCGGGCGACCGCGCGTCGGACGGCGCG 289466 33 75.8 0 .....................TG.G...CAGAG | ========== ====== ====== ====== ================================= ============================ ================== 3 33 89.9 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGC # Left flank : ACCCAGCTCCGCGCTCAGGTACCGGCTGCCGTGCCCGGAGCAGAACTGAAACCCCGAGATTTTACCGATGTCATGCAGCCCCGCGCACAGCCCGACAACCGCCCGCGCACGCCCCGGTTCACCCGCCAGCCCCAGCCCTTCAGCGATCCGCACCCGCTGGTTCTCCGACAAGAACACATCCCACAAGTGCAGCGCCATCGCAGCAGCATCCAGCAGATGCCGGATCAGCGGATACGGCGCCAGCCCCGGATCCAACCCCCGCGACTTCCCCCACACCGACTCATCCAGCATCCCCCACTCCCCCGGCATCCCCGCCCCCTCCACCCGATCAACGGGCGCCACCCCGCTACTGGAGCCGGCATTCAACCACCCCCTCACCGACAACACACCGCAAACAACCCGCCCCGATACAGTGACCACATGCAACCCCGTACACCACACCGAACCTCACCTAAGGCAAAGGAAAAGCAAAGCCCCTCCTAAGCCGCAGGTCAGGAAGA # Right flank : GTGGACCATGCGTACGTCGCGTCGTTCGGAGTGTTCTTCGTCGGTGTCGTCGTTGGTTGCGGCTGTGTGGGGTGGGGTGGCCTGGCGCATCACCTCCGGCGCGGTCCGGAACGTGCGCTTCGACGGGTCCAGCTCATGGGTGCCGTCACCGAACAGCCGGGCCCAGTGGGCGTGCTCGCGGTCCAGCAGGTACATCGTCAGGCCCGCCGCATCCCCCTCCGGCGGCGGGCGGCCCACGGCGTGGGCGTCGACGGCGACCAGCGCGGCCATGTGCAGCGTCAGCGTGAGGCCGAAGTCGGGGTGGTCCAGATGGCCGGGGACCGGGACGGCCGCGGCGCGGTTGTCGAGCCCGTAGCGGGCTGCGAAGGCGCGGTGCGCCGCGTCGAACATCAGCCGGCGGTCTCCACTCCCCTCGTCCGGCTCCAACGGCCGCAGATACTGGGTGGAGGTGCCCGCCTGCTGGTTGGTGAGGGAGGCCCGCAGAGCCGGCCACGCGTCCG # Questionable array : NO Score: 3.67 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [2,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 298967-299304 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBK01000002.1 Streptomyces viridodiastaticus strain JCM 4536 sequence002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 298967 33 93.9 28 ..............................TC. GCATCCGCGACTACGCCGCCCTGGAGTC 299028 33 93.9 28 .............................GG.. CGGGCGGGCGGAACGGGGACGGCTGCCT 299089 33 90.9 28 ..............................ACT GTTGGGTGTACCGCTCGATCGCCTCTTG 299150 33 93.9 25 .............................T..G TGCGCCAGGAGTCGAAGTAGTCCCC GGT [299179] 299211 33 100.0 28 ................................. ACCTCCACATCCAGCAGGACCGTGCCAC 299272 33 93.9 0 ...............................TG | ========== ====== ====== ====== ================================= ============================ ================== 6 33 94.4 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGA # Left flank : CGTCCAAGACGTCCAGTCCCTGCTCACCCCACCCCACACAGCCGCAACCAACGACGACACCGACGAAGAACACTCCGAACGACGCGACGTACGCATGGTCCACCTCTGGGACCCCAAAACCGGAGCCCTCCCCGCAGGCGTCAACTACGCCACAGGAGAAACCTGATGCCCTCCATGGTCGTCATCGCCACCACCGCCGTCCCCGACCACCTACGCGGCGCCCTCAGCAGATGGACCAGCGAAGTAGTACCTGGCATCTTCGTCGGCAGCGTCTCCGCCCGCGTCCGCGACGAACTCTGGAACGCCGTCACCGAAGTCGTAGGAACCGGCGCTGCCCTCCTCGTCCACCCCGCCACCACGGAACAGGGTTACGCCATCCGCACCGCAGGAACCCGCCGCCGGGTCCCGGTGGACTTCGACGGCCTTACCCTGATCCGTATGACCGCCACACCAAAGGTAAAGGAAATGCAAAGTCCTTCTTAAGGTGCAGGTCAGGAAGT # Right flank : GAGAACTGGCGGGACGTCACCAACGACTAGGCAGTTTCGTTTGGATCATCGGGCGGACCAGAGGAAGATGCCCGCGATGTGGAGTCCGGCCAGGTAGATGGTGGCGGTCTTCTCGTAGCGGGTGGCGATGCCGCGCCACTGCTTCAGGCGGTTGATGCACCGCTCGACGGTGTTGCGCTGCTTGTAGGTCTCGCGGTCGAATGCCGGTGGCCTGCCGCCCCGGCTGCCCCGGCGGAGCCGGTGGCTGCGCTGGTCCGCGGGGACGGGGATCACGGCCCGGATGCCGCGTCGGCGCAGGTGGTCGCGGATCGCGCGGGAGGAGTACGCCTTGTCGGCCAGGACCACGTCCGGCCTGGTGCGAGGCCGGCCTCGCGGGCGGGGAACGCGCAGGCGGGCCATGACCTCGGTGAAGGCAGGTGCATCACCGGCCTGGCCTGCGGTGAGAACGAATGCGAGGGGCCGGCACCGGCCGTCGGCCGCGAGGTGGATCTTCGTGGTCA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.07, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [51.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 300234-302035 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBK01000002.1 Streptomyces viridodiastaticus strain JCM 4536 sequence002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 300234 33 93.9 28 ...............................CT GGAACGGCACCCCGGCCCGTGTCAGCGC 300295 33 87.9 28 .............................TTCT GCGTCGCCTCCGGGTACGCGTCGTCGGT 300356 33 97.0 28 ..............................G.. AGCCGGGCGTGCCGTCGGGCGCGGTGTG 300417 33 93.9 28 ..............................A.C GCCGCGCTGGGGGCGGTTCGCGGCGTAG 300478 33 97.0 28 ................................T AGACCAGGCCATCAAGCGCTACCAGCGC 300539 33 90.9 28 .............................ATC. AGTACATCTCCACCAACGCGACGCTGTG 300600 33 87.9 28 .............................TACT CCTCACCCCGGCCATGCCGCTTCACCTC 300661 33 90.9 28 .............................TAC. CCTGCGACGCTCCGGGTATCTTCTGCGG 300722 33 90.9 28 .............................A.TC CGACGGGTCGGTGACCGGCTGCCACAAG 300783 33 87.9 28 .............................TTCC TCAACCGCCCGATTCAGGGCGAGGACCT 300844 33 90.9 28 .............................A.CT GCGTCTCGCCCGCAGGGATGCTCTCGCT 300905 33 90.9 28 .............................G.CA TGAGCCAGAGGGCGCGGTCGCGGAGGCC 300966 33 90.9 28 ............................T.GA. CGTGGCGTCGGGCCGGGTGTCGTACGTC 301027 33 97.0 28 ...............................C. ACGGCGTGTATGCGCTGCACTGGCTGGA 301088 33 97.0 26 ................................A TGGGGAACACCAGGCGACTGGACCAG AT [301117] 301149 33 90.9 28 ..............................TCA AGGTGCGCGAGTTCCAGGTCCGCCAGGA 301210 33 97.0 28 .............................T... GCGCGGCCACCACCGGGCCGTCGATGCC 301271 33 93.9 28 ..............................T.T ACCGGCGCATGGTCAACACCTGGCCCAC 301332 33 90.9 28 .............................GT.C AGGGGGCGACGGGTGAGGCCCGGAACCT 301393 33 93.9 28 ..............................T.C CGCGGCCCTCGACGGGGCCGTGGGGGTC 301454 33 97.0 28 .............................G... AGGAGCTGCTGTCCGGGTTCGCGGACCG 301515 33 93.9 28 .............................A..A TCGTCTACGTCACCGACGTGCCCACGGA 301576 33 97.0 28 ..............................T.. ACGCCATGCCGCCGTACCGGCGCGTCAC 301637 33 87.9 28 .............................GTAC GGATTTTCGGGCTGCCAGGATCTTGGGG 301698 33 93.9 28 ..............................AC. CGGCGGTGTAGTCCTTCACCGCCTGCTC 301759 33 90.9 28 ..............................ATT TGCTTCGGGGTTGCTTCCGTCGGTGAGC 301820 33 93.9 28 .............................T..C TCACGGGCGGAGCCTACGCCGCGGTCGT 301881 33 100.0 28 ................................. TGAGCTCGTCGACCAGCTCGGGGTCGAG 301942 33 90.9 28 ............................T.A.A TCACGCACGCCTCGGATGCGTGGCTCAC 302003 33 93.9 0 ...............................AC | ========== ====== ====== ====== ================================= ============================ ================== 30 33 93.0 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGG # Left flank : TGGCCTGCGGTGAGAACGAATGCGAGGGGCCGGCACCGGCCGTCGGCCGCGAGGTGGATCTTCGTGGTCAGTCCGCCGCGGGACCGGCCGATGGCGTGGTCGCCGGGTTCGCCGGCCGAGGCCCCTTTTTGCGGGCCCCGGCCGCGTGCTGGTGGGCCCGCACGATCGTGGAGTCGACCGAGACGGCCCAGCTGACGTCCTCGTCCGCGTCGGCCTGGGCCACCAGGGCGGTGAACACCCGCTCCCAGGTGCCGTCCACGGCCCACATCCGCAGCCGGTTGTAGACACCTCGCCAGTTGCCGTACTTCTCCGGCAGATGCACCCACTGCGTGCCGGTCTGGAACTTGAAGGCGATCGCGTCGATCACCTCACGGTGGTCCCGCCAACGGCCACCCCGCTTCGGCGTCCGGTCCGGGAGCAACGGCTCGATCCGCGCCCACTGCGCATCAGTCAACGGCACACCCGGACCAACGACCTACTGATCCAAACGAAACTGCCTA # Right flank : CGCCTCTGCCGGGTACTCGCCGGCCTGGCCCTGACCACAGCCGCCGCAACCGGCGCCATCACCCTGCACACCGCACCGTCTCGGCGGACACCGCATGGCGTGCGCCCGCCACGGAGGACGACACCGCATGGGGGAACCCGCCCGGGGAAGGCGACCCGGAGCCGCCCGCCAGCCCTTCGCTGCCGCCTGTGGTGCCGTTCGACACCGCCTGGGGCTAACCACGCCCCGCACCCGAGACCGGGCGCGGCAGCAAGCCCCCAGCACGCTGCCGGGCCCCACCCATGCCGAAAGGCTCCCGCCGCACCCCGGCCACCGGTACCGTTGCGCCAAACACTCCCGGGGGACCAATGGGATTACGTGATCTTTGGATGCGCCGACGTGCGCGCCAAGCCCTTGCCGACGAGCAGCACCGGCAAGACGACTACGAAACTTACGCGGCCATCAGAGATGAAGAGCGCCAAGAGGCTCTCGAGCGGGATATGGAGAGGGCGCGCGAGCTG # Questionable array : NO Score: 3.47 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:-1.5, 6:0.25, 7:0.00, 8:1, 9:0.07, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGCCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.60,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 303738-304196 **** Predicted by CRISPRDetect 2.4 *** >NZ_BNBK01000002.1 Streptomyces viridodiastaticus strain JCM 4536 sequence002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ============================ ================== 303738 33 97.0 28 .............................A... CGGACCCGCATTCGGCCTTGCATGTCAC 303799 33 87.9 27 .........................C.G..C.A GCCCGCCGGCGGGCGGCCGTTGGTCCC 303859 33 90.9 28 .............................ACG. CGCCGCCGGAGTGGCCGGACCCGGTGCG 303920 33 87.9 28 ..............T..............CA.T ACCGGGTCGGCCCCTCGGAGACCTGGAC G [303937] 303982 33 93.9 28 ..............................AA. CGTCCGGCTCCCGCTTCGCCGCGTACGC 304043 33 84.8 27 .........................C.GT.CT. ATCGGTGTCCGAGCGGACGCGGGGCGG 304103 33 100.0 28 ................................. TCATCTTCACCCCGGAGGGCATGCCCTT 304164 33 87.9 0 ..............T...A...........C.G | ========== ====== ====== ====== ================================= ============================ ================== 8 33 91.3 28 GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCC # Left flank : GCAGCTCGAGGCGGAGGCGAGGAAGGCCGAGCTGGAGGAGCGCATAGCCCGAGAGAGGCGCCATCACACGTTACGGATGACCAGCCTCATCGTCGGCGCGGTCCTCGCCCTCGGGATGCTCAGCGGCGGCGTGTACGTAGCGCCGGACTCGCCGTGGCTGGCGAGTGTCCTCTGCGGGCCGAGCCTCATCGGCATGACCCTCATCATCGTGCTGCGCCGGCACGACGCGCACATCATGAAGGGTGTCGGGGACGCCGCTCGCCGGGCCATGAACGCGGCCACACAGAACCAGCAGCCCCCGCCCCCGCCTCCGCCGGCTGTCTGATTCGGCCCCGCTTGTCGGTCCCCTCGAGGGCACGCAGCTTTACGAGGCGTTCGGCCGGGGTGAGGTCGTTCATGTGTTCGAGTGTATGGGCGCACGAAAAGGGCCCGCCACCTGGGGTAACACCCCACGATGACGGGCCCAAGCCCACTGCCCTACCGGTACGGGCGCAGCACCT # Right flank : GCCGTGAACGCGCTCGCGGCTTTGAGAATGTCGTTCGCCCGCCTCAACCCCGCTACCCATTTACGACGTTGCTTCAGTTCCTCGTGCTCGGCGGTGGTCAGCCGGTCGTCGCGTTCGCCGGCGTCCGCTTCGGCCTGGCGGACCCAGCCGCGCAGGGCTTCCTTGTGGATGCCCAGGTCTTTGGCGACGTGCGCGATCGGCTGGCCCGTAGTGCGGACCTCGCGAACGGCCCGCTCGCGGAGCTCGTCCGGGTATTTGCGTGGCGCTGGCACTGCTCGTGGTTGTCCTTCGGCCCAGGATCGTGCCTGGTTTCAGGGACTCCACGAATCCGAGGTCAGCTCACTTGCGGTTGGTGCGCGCCCCCATGGTTCCCTTCCGTGTTCGGCCAGGTAGGAGTACGACATGACCGTCAGACGCGCTTAAGGCAGGTTGCGGGACCTGTCCGCCCGGCACAATCCCAACCGTCCAGAAAGGCGGCCAGGGCGCGGCGTTGCTCTTCC # Questionable array : NO Score: 3.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.56, 5:-1.5, 6:0.25, 7:-0.03, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTCCCCGCCGACGCGGGGGTGTTCCGTGCT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.60,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [31.7-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //