Array 1 190542-190153 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRBN010000001.1 Enterobacter roggenkampii strain EB00019 EB00019_c0001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 190541 28 100.0 32 ............................ GCTAATTGGCTCCTTGGCGGGCGGCAGGGTAT 190481 28 100.0 32 ............................ CGTCAGCTTTCCGGCGGAGAGCTGCGCCGTCT 190421 28 100.0 32 ............................ GTGTTCTTGAAGTTGATGAAAATGGCGCAGTT 190361 28 100.0 32 ............................ CAGCGGTTTTCGCATAATAACCGCAGGGTCGA 190301 28 96.4 33 ....A....................... GCATGAATCGCACTTCCAATGTGCGCCGATTTA 190240 28 85.7 31 ....A......C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [190215] 190180 28 67.9 0 ....A...T..A....AT...CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 7 28 92.9 32 GTGCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : AAACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACACTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTAACCTCCTGAGTGATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGGGTGGGTGGAATGGGTGTTTTTGTGAGGGGGATTGATGCGAAGAAGGTGTTTTGACCCTAATTTTTAGCGTTTGTGTAATTTATTGATTTTAAATGAGTATTCTTGGTGGGTAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCGACTGCGACACACAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAACA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 201087-200095 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADRBN010000001.1 Enterobacter roggenkampii strain EB00019 EB00019_c0001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 201086 28 100.0 32 ............................ GACCGCATGTCGTAAAACAGTTTCAGTGTTTC 201026 28 100.0 32 ............................ AAACGATAGCGTCACATGTTTTTTGCGTCAAC 200966 28 100.0 34 ............................ AGTCCGCTCCCTGAAATGTTCGGCGCGTCGCTGT 200904 28 100.0 32 ............................ ATAATATTTATTGATATACTCTTTTAATTCCA 200844 28 100.0 32 ............................ AGAAAATAAGCGCTTTAACGCCCTTATAGCCC 200784 28 100.0 32 ............................ TTTACGCGCTGATAAATCTCCACCTGACGACC 200724 28 100.0 32 ............................ TGCAGGGATTGCCTTCAGTGTCGCCAGCGCAA 200664 28 100.0 33 ............................ ATCAGCAATGGATGGGAACGCATCGAAGCAATC 200603 28 100.0 32 ............................ CCTCTCGCGTTCGTGAGAAGTTCGAACATGAT 200543 28 100.0 32 ............................ TTGTGCCAGTTACGGAAAGCGGAGCAGAACAG 200483 28 100.0 32 ............................ GCAGCCAATACCAGCGGTAAAACGCTGCTCGG 200423 28 100.0 32 ............................ TCTGCCGCGTCTGTTTTCCTCGCCTCACGCGG 200363 28 100.0 32 ............................ GTCGGCGGCAGCATAGCTGACAGTAGTTTCCG 200303 28 96.4 32 A........................... TAATTATGGCGCTATTACGCTGAGTCATAACG 200243 28 100.0 33 ............................ CGCGCGGACGGCTCCACGGTAAAACACGTATCA 200182 28 100.0 32 ............................ GGGTGATTACATCTGCGGTGAATGCTGCGTTG 200122 28 92.9 0 ............G..........T.... | ========== ====== ====== ====== ============================ ================================== ================== 17 28 99.4 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAAGTGGTGGAATTTGAGGACGAAGCGGAAAAACCGCGACAAAAAGAGTGGTTGCTGGAAGATACAGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGCTGCTGGTGTCGCATTTTGACTGCGATATGTTGCCGCACCTGACGGGGTTGCTGCATGACATTACGCATTCAATGGCCGCGGATGTCGTTGCACCTCAAAGTGCAGAAACGGTAATTCATATTATTTCCTGAGTGCTATCTGAGGCGTCGGGGGTGTTCCTCTGACGCCATTGGTTTAAACCCTTTTTTCTGATGCTTACGTAACCTTTTGATTTATATAATGCGAATTTACGAACCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTTTAACAATAAGATGGCGCAGTTTCCTTTCA # Right flank : GCCCCTCTGGGCTTTAATGCCGTGGAAATGGCGTTACTGTCCCACAGACAGTACAAGTAAACCCATCCCTCACAAACATTCACCTCGTCTATTTAAAAACAAAATACCATCATCCACACGCTTTCCCTTTTCAGATTAAATAAAAATCCCATTCAGGGGATAATTATATTTTCGTGGATATATTATTAGTGAAAATAATCCTTTTAAAAAAGGATGTATTTTTTGTTTAGTCATCACCGAAATTTCCATTCATTTGATATCTATCAAATTTGCATTTGTCTTATGTCCGATAACATACCCGCATTCAACACCTTGAAATTAAAGCCGTTGCCATGCCTGCAAATAGCATCACTCCTACCGATTTAAAAACCATCCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGCGGGCGCGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //