Array 1 25124-24785 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUM010000037.1 Streptomyces sp. AC542_RSS864 NODE_37_length_113355_cov_56.5363, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 25123 29 100.0 32 ............................. CCAGCCCTGCGTACCGGGGTGCTGCCGCCCGC 25062 29 100.0 32 ............................. GGACCGGAGGACACGACGATTCCCGCCTGGTC 25001 29 96.6 38 .......T..................... CAGTGACCGTCCTCGTCGACATCGAGCTGGAGCTCATC 24934 29 100.0 32 ............................. CTGCGCGTGCCCTCCGAGCCAGGCACCCCCTC 24873 29 100.0 32 ............................. GATCAGGCGCTCGGAGTCGATGCGGAGCAGGC 24812 28 79.3 0 ...........-.....A..T.AA.C... | ========== ====== ====== ====== ============================= ====================================== ================== 6 29 96.0 33 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGGCAACCCGGTGACGCCATACGCCCTGGCATTCACGGAACGACCCGCCCGCGCCTACCTGGTGCACCGCTCGGCCGAGCTGGCATGGGGAGCGGCCCGAGTGGCCCAGGCACTGGCAGAGACCGTCACCAGCGATGCCACCGCGGCGCAGCTCTACGTGACACGCGGATGCCTCGACCATGCCTCGGTGTTCGGCCGCGCCGCCGACGGAGCGAGGAACCGGGCCATCGAAGTGTTCCCGCTCGTGCCGCCGCTCGATCCACGCCCAGCTCTGCCCACCGATACGACCGCAGGCATCTCCGCGCACCTCGCCGACGACTGCGAGCGCCTGTCCCGTACCGCTTTCGAGGCCCTGCACGGCCGCGGCGAGCCCAGCTTGAGCGGGTCCGACGTCCAGCAACTGGCCCGGTGGCGCGCGATGAGCGATCTGCTGTCCGGCCGTATCCTGCTCCACGCCGCCGCGGTCCCTCCAGGCGGACCTGCCGCCCGGCACCACGATC # Right flank : AACCACAGATCCGCCCTCGCTGATCCCCGCGCCTTCAGCAGCCCATGACCGATCAGTGATCGCGCTCCTGGAAACCTTCACAGACAGCTCCGGCACGACACGCCGAGCCGATACTTCCTCTCTCGGCGATAGGCCAAGGTCCCCACCACCGAACCCAGTTGATGCGACCGAAGCGGCAGCCGAGGACCCAGAGTTGATCTTGTTTCGGGGTTAGGGTGCGGCTTCACGAGACTGCTCTCGGAGGTGCTCGCCTGGTGGCCGACAGCTTTGTTCACCTGCACAATCACACCGAATACTCGATGCTCGACGGCGCTCAGAAGCTGAAGCCGATGTTCGCCGAAGTGGACCGGCAGGGCATGCCGGCCGTGGCCATGAGCGACCACGGCAACATGTTCGGCGCGTACGAGTTCCAGCAGGTGGCCAAGAGCTTCGGCTCGGTCAGGCCGATCATCGGGATCGAGGCGTACGTGGCCCCCTCCTCGCGCCGGAACCGGCGGCAG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-14.10,-14.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [38.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 26724-26936 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGMUM010000037.1 Streptomyces sp. AC542_RSS864 NODE_37_length_113355_cov_56.5363, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 26724 29 96.6 32 .......G..................... GAGCCGTCCGTGTCCCTCGACATGCAGGACGG 26785 29 100.0 32 ............................. CGCGTCGTCGGCCTGTCCATCACCCCGCCCGA 26846 29 96.6 33 .....T....................... GCCGAGCTGATCGCCCACGTCGCCGGGCCCGAA 26908 29 93.1 0 ...........G.A............... | ========== ====== ====== ====== ============================= ================================= ================== 4 29 96.6 33 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : TCGCCTGCGCGGCGATCATGGCCTGAAGCTCGTCGCCGCCTTCCTCGAAAGCCGCGTCGTCCGCCACTCGTTCGGCCACGGCGAAGGCTTCCCAGGCGGCTGCCATGATCTGGGCCCGGTCCGTCGATTCCAGGGCCGCGTCCAAAGGCTTCAACCTGTCTGGTAGTGACACTCCGTTACTCCCTGTCTCGCTCAGTCAGGCAGTGATCGTCTCACTCGGCGACGGCGACGCGGGGCGCCCTGTGGATAACGCTGAGGGCTGGGTGTTGAGGCGGAGGAACAGGCTCTGCAGGTGGGAGCGGCCGTCTCGGGTGAGAGCGGGGGAGGGGTGGCTGTCGCGTTGTCACCGGTCCTTCGGGGTGCGGGGCATTGCGAGGTTGACGTAGCGCGGAGCTCGCTCGGCCTTCATTGCGTTATCGGATGAAATGCCCAATTTGCCGGAATCTTTCAAAGTCCCTGAGAACACGCTTCGGCGGCTATAAACTTGCAGGTCGAAGAGT # Right flank : CGGTCGTCTCGGCGTACGGAGCCTCAGGAGGTACCTGCCCGGCATCCGGCGGCGAACTGGTTCGCATGTCAAGGCCCTGGCTGCGGCCTCGGCCAGCATCCAGGCCACCCAACATTTTTGCGAGGTCATGACAACTGGCGGCGGCCCCTCTACCATCGCGGCACGCAGTGGCATTTATGTGACTGGAGGGGGCAATGCGGAACAGGTACTTCCGAAATAGGTTACGGACGACAGCCGTTGCCGTGTCGTTGGCGCTCCCGGTGACGCTGATGGGCCTGCCGGCACCCGAGGCGGCGGCGGCCGAACCGGCCAAGCTCGTTCCCGCGGCATGCGCGGGCATGACCCCGCCGCAGGAGGAGGACCACTCCTCCATCCGGCTCGAGGCACCGGAACACGGCACCGAGGTCGCCGTCGACGAAGAAGGGAAGATCGACGTCGCCGGCGTTCTGCACAAGCACGCGAGGATGGTCGACGTATCGGTCGGCAAGCTGGTGACGACC # Questionable array : NO Score: 3.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //