Array 1 27133-27568 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_MJHE01000030.1 Lactiplantibacillus plantarum strain RI-029 20150702.X-R29_S14_R1_001__paired__contig_30, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     27133	    36	  83.3	    30	.....G..A.........G..G.CG...........	AAACGTTCTATGCTTCGTTTCCTCAGCATC	A,G,TT [27135,27138,27147]
     27203	    36	 100.0	    30	....................................	GGCATGTTAGTAGTTTAGGCGCCCTCCAAA	
     27269	    36	 100.0	    30	....................................	TAATACGATCCATTGACTCCGCTAGTGACA	
     27335	    36	 100.0	    30	....................................	CAGCTACTTCATGCTGGCTAAAAGTATCTG	
     27401	    36	 100.0	    30	....................................	TATTCTCGTTTATCGCTTTTAGACGTGTTA	
     27467	    36	 100.0	    30	....................................	CGTTGGAGTTTGTGCCTTAACTTCTTCAAG	
     27533	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         7	    36	  97.6	    30	GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC	                              	       

# Left flank :   ATGTTAAGTCTGGGTTGTTGTCAAAATTAGATTACTTTGAAATCGGCTATGTCTCCTTCCTAATTTCTGGATTGGGGATCTTCGCCTATGACTACTTGACCGCGCTTGGGTTACCAAACGTCGTCGGTAGTACCATGTCACTGAACATCATCATCTTTGGTAAGATTTTCTACCTCTTCAACTTGCGAAATGACCACCCCGTCATTTCCAAGTACTTCTTCCAAAATAAGATGGCGTTCTACATCATTGGTATCCTGATTCTCTTACAACTGGGAATCATTTACCTACCATTCATGCAATCCGTCTTCCATACGACTAGCATCAACTTCTGGTATGGTTGGGGCATCCCGATTATCTGTGGGATCATCGTCTTGATTGTGACCGAGGTCGGGAAGTCTATTCGGTTCCGATGGATGGGAAAAGATGGCGTGATTGATTAGTAATTAGTTAATAAATAGAAATGGCTCACCAACCTGTTTTAGTTGGTGAGCCATTTTTTA
# Right flank :  CCAGCATTTTAACATCATTTACTCATTAATTCATATCACGCCAGTCTACTAAATCCTCGTCAACATAATAATAACAACTATTTTTGAACTTTTCCATTCGATTTATTTCTGAGTATTCGATAACAATGACAGTTGCGCCCAAATCATGCACTAGTTGCTCAAAGCTCGCCCATTGTTTTTGATTTAAGTAATGGCTGACATTAGTCAACACCAGCTTCTGTTTCAAACCTAGTTCAACATGCGTTTGCACAAGTGCCTCCAGTATTGCCCTTGGGTCATTCATAAGCGCCGTTGGAAAGTGAATACCGGTAAACTTCAATATTTGTTCTAGGCTAGGCGATTCGTCAACATCTAGCGGTAAGTCTAGTAAGAAGCTGGCTTCCATTACTTGCGAAACTACTTTACGATTTTCATCTAAGACCGCTACTTGCCGATCATCAGCCATTAACTTGATAATTTGGGTCTGCACTTTCTTTAGAAAAAGGCGGTTCAAATCGACT

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCTAAACCTGTTTGATATGACTACTATTCAAGAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.20,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0,0   Confidence: NA] 

# Array family : NA
//