Array 1 23127-22798 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLJA01000242.1 Acinetobacter baumannii strain ABOB09 contig-32, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 23126 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 23066 29 100.0 31 ............................. TCATCAATAAGTTGGCCTTGATTTAAATAGT 23006 29 100.0 31 ............................. GATACAAACGAGTTCGCATCTCGACCAGAAG 22946 29 100.0 31 ............................. TTATCCAGATAAAACCATATCTACAAAGTGG 22886 29 96.6 31 ............................T CAACCTGAACACAGACATACATGTTCTATTG 22826 29 82.8 0 ...GC...................AT..T | ========== ====== ====== ====== ============================= =============================== ================== 6 29 96.6 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : | # Right flank : TTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1546-83 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLJA01000294.1 Acinetobacter baumannii strain ABOB09 contig-4000065, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1545 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 1485 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 1425 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 1365 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 1305 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 1245 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 1185 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 1125 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 1065 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 1005 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 945 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 885 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 825 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 765 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 705 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 645 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 585 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 525 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 465 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 405 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 345 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 285 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 230 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 170 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 109 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 25 28 97.7 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAAC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3814-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLJA01000181.1 Acinetobacter baumannii strain ABOB09 contig-3000003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 3813 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 3753 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 3693 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 3633 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 3573 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 3513 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 3453 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 3393 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 3333 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 3273 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 3213 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 3153 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 3093 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 3033 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 2973 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 2913 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 2853 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 2791 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 2731 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 2671 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 2611 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 2551 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 2491 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 2431 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 2371 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 2311 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 2251 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 2191 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 2131 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 2071 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 2011 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 1951 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 1891 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 1831 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 1771 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 1711 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 1651 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 1591 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 1531 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 1471 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 1411 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 1351 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 1291 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 1231 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 1171 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 1111 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 1051 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 991 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 931 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 871 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 811 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 751 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 691 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 631 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 571 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 511 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 451 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 391 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 331 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 271 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 211 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 151 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 91 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 31 28 89.3 0 ....T.......AT.............. | ========== ====== ====== ====== ============================ ================================== ================== 64 28 95.0 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : AATA # Questionable array : NO Score: 5.80 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //