Array 1 83589-87461 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWTT01000009.1 Aeromonas veronii strain A86 contig00009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 83589 28 100.0 33 ............................ TGCGTTGAACCCGCGAGCCAGTAGGTTGTTCCC 83650 28 100.0 33 ............................ TCAAAGAGAGGAATGAGCCGTGATTACAACTAG 83711 28 100.0 33 ............................ CATTGCGGATGCTCTTATCAAGGATTCTGGCAA 83772 28 100.0 33 ............................ CCATACTGATTCCACGGAAGCTGGAGAGGCTGC 83833 28 100.0 33 ............................ CGTGCTAGAAATCGTAAAGATTCTAAGCTGCGT 83894 28 100.0 33 ............................ TACTACGGCATTGAAGGGGCTGGCCACGCTGTC 83955 28 100.0 33 ............................ CAGCGGGGACATCTCCCCGTTGGGGAGACCGGG 84016 28 100.0 33 ............................ CAGGGTCAGGGAAAATATGAGGGTAGGGGTAAG 84077 28 100.0 33 ............................ CATGGCATCATCCAGACGCCACCCTGTTACTGT 84138 28 100.0 33 ............................ TCCTGGCCATAGTGGTGGAGCAACGCTCGGCCC 84199 28 100.0 33 ............................ CAGTACGAAACGCTGGAGGATGGCACGATAAGG 84260 28 100.0 33 ............................ TGTAACTCGCCCCATCCTACTGAGCATGCGAAG 84321 28 100.0 34 ............................ CAAGGAGGAAACATGGACGATTTGAGCTTGAGCG 84383 28 100.0 33 ............................ TTTACCCTTGCATTCTAACTCTTCCATCGTCTC 84444 28 100.0 33 ............................ TGAGTGGATCTCATTAAGATTCACTCACCTTGC 84505 28 100.0 33 ............................ TAATGCACCGCTACGACCGAGCCATCATGCAAG 84566 28 100.0 33 ............................ CGGCTTGAAGGAACCCCTCGGCAGTGACCTGGA 84627 28 100.0 33 ............................ TTGGTGAGCAGCCTGAGTATCAGCCGCCCGAGC 84688 28 100.0 33 ............................ TCTGGATATCACCTCCCCCATCGATCCGGATAC 84749 28 100.0 33 ............................ TCTGTTATCAGATTTCCAAGCGTCCACACGGGC 84810 28 100.0 33 ............................ CTGGCTGATCGTCTCGGTGACCCTGATGGAATC 84871 28 100.0 33 ............................ TAGCCCTCCGTGAGCTTGGTAAGCGTTCAGAAA 84932 28 100.0 33 ............................ CTCTTGCCCGATACGGGTGTCATTGTGATTCAT 84993 28 100.0 33 ............................ CTCGGTGATGAGTGTCGTGACGTCTTCGGCGTT 85054 28 100.0 33 ............................ CAGTCTGGGCTGTCAGGCAATGGCACCTATAGC 85115 28 100.0 33 ............................ TGTTGCATCTATTGGCTATGCCACTGCATACAA 85176 28 100.0 33 ............................ TAGCGTGACTGTCTGAACACGAATCGATACCCG 85237 28 100.0 33 ............................ CATGCTGTCAGCCACCTCACGGCGCATTGCATC 85298 28 100.0 33 ............................ CATCTATCCATGAGACATTGGTTCGATTGGAGA 85359 28 100.0 33 ............................ TCACGTCTCTCACCATGTTGGAAGGCAGCACGG 85420 28 100.0 33 ............................ CACACACCTTATCAATGCCCATCATTTTCTCCT 85481 28 100.0 33 ............................ TTCAGCCCTCAGGACTACTACAGCCACGTGACC 85542 28 100.0 33 ............................ CGGTGCCTATCTCGCGTAGGGATGAATTCGAGG 85603 28 100.0 33 ............................ CGCAGGGTTTGACGTCTACGTGCATGAGTGGTG 85664 28 100.0 33 ............................ TTCTCTCATTTCAGCAATTTCCAATGGTGCTGG 85725 28 100.0 33 ............................ TACATCCTTAGCATTGTGTGCAACAAGCGCTTG 85786 28 100.0 33 ............................ CCATATACGTCAGAGGCCAGCACAGACGGTAGC 85847 28 100.0 33 ............................ CCCTGTTGTGGTTTTTGATATCCCGATCATATT 85908 28 100.0 33 ............................ TCCCATGGGTGAGTTCGCCACCCTGACTCGCCT 85969 28 100.0 33 ............................ CGACGCTATCCACTGTGGATACGGCACGTTGAA 86030 28 100.0 33 ............................ CTGGCCGCCTCTCGGCGTCTCAGTGTCGCCAAG 86091 28 100.0 34 ............................ CGCACAGAGACAATTTTGGGTGCAGAAGAACCCA 86153 28 100.0 33 ............................ TCGTATATTGCGGCAATAACCCTGACGTGGTAA 86214 28 100.0 33 ............................ TGTGCCACAGAAGCAGTACGACCTGTATATCGA 86275 28 100.0 33 ............................ CTAATATCGACACGGGCGAGGAGTTCCATTTTG 86336 28 100.0 33 ............................ CTTGACCATATGGAGCTTAGCCGTAAGCATGGC 86397 28 100.0 33 ............................ CCAGGTGGCGGGCACCTTCGTTGACCCGATCAC 86458 28 100.0 33 ............................ CGACCCGTCCGCACTTATTTGTGGGCAAACATC 86519 28 100.0 33 ............................ CAGCGTGGCCAGCACCATCACCCCGCAGAGGTT 86580 28 100.0 33 ............................ CTACGGTCACACCAGCGTGCCGCCAGAGGGGTC 86641 28 100.0 33 ............................ CCCCATCGACCCCGCCACGCTCGACGACTTTTT 86702 28 100.0 33 ............................ TCGGTGCGGATGGATAACCTCTACACCGCTGGA 86763 28 100.0 33 ............................ CAACTTTGACGCACGTAACTTCGAAAGATGTCA 86824 28 100.0 33 ............................ TCAGGTGGGGGGCAGACATCCGCCCCCGTGTGA 86885 28 100.0 33 ............................ CCAGTCGTGCTCTGTTCGCCTAAAGCCTACGAG 86946 28 100.0 33 ............................ CGACCCCCCACTGAACTTCTCTCCTGTGTACGA 87007 28 100.0 33 ............................ TATAGCGGGTCCTTGAGCGTGGCATATGTAGTC 87068 28 100.0 33 ............................ CTACTATGGAGCCGTGTTGTGGTCAAACGCCAA 87129 28 100.0 33 ............................ TTGGCAGCCAGGGTCATTTGCATGCACCTTGCA 87190 28 96.4 33 ..........T................. CGAGCTGGACAGCCTCAAGGCCAGCCTGCTGCA 87251 28 96.4 33 .................A.......... TATCGCCGCCGTTATTCAGGCGACCGGCGCCGG 87312 28 96.4 33 ....G....................... TATCTCCGAGGTGGCAAAAACCAGTGCAGATGC 87373 28 96.4 33 ...........A................ CCATGCTGATAACCATCACCAGCCTACCAACCA 87434 28 71.4 0 .C...............A..A.CC.GCG | ========== ====== ====== ====== ============================ ================================== ================== 64 28 99.3 33 GTCTTCCCCACGCCCGTGGGGGTGTTTC # Left flank : GAACCTCTGCATCGATCTCGCCTTTTCCCTGACGCGTGAGATGGCGGGGCGTTATGAGAAGGCTCTGGTTTCATCCCGCTTTCGAGAGCGAGTGATAGAGCTGGATCTGCTGACTCGTTTGGCACGAGATATTCCGCAGTTATTGGGAGGGGCAAGTACTGATGCTGATAGTACTGGCTAATGATTTACCCCCTGCGGTACGAGGACGAATGAAGCTCTGGTTCATCGAGCCGAGGCCCAACGTCTTTGTATCTGGCATTAAAGACTCGGTCGCTGACACAGTGATCGAATACCTCTGCCAACACTGTTCACCGGCAGCTGGTGTGGTGATATTCAAGAGCATCGCCAAAACACCGGGCTATCAGATCCGTACCATAGGCTCACCGACCAAGACGATCTGTGAGATAAACGGCCTGCAGTTGGTGGTAGAAAAGCTACTCGACCAGTAAGCCAACCACAATCTATAGCTGGCTTGGCGCGATCTTTAACAATATATTGGT # Right flank : GTAACAAATATATCTGGGGAGGTTGTATATCTCTGTAGCAGTAATTGACTGACCTTAACTCAAGGCACAACAAACCAATTTCCCAACATCTGCGTATTCCGGTGAAGTTGAACAGTGATTCCGGAATCTGTGAACACCATTTCCGGAAAGTATGCGGACAGGGATTCTTCGAGCAGAAACTGAGCTTTGAGGGGAGGCATCTTTTCGACTCACCGAACAAGCCAGCAGCCAAGCGCAGCGCGGCAGTTGTGGATCCAAAACGTTGGAACAGGACGGTTCATCTGACATCAGAGTACGTGCACTGAAGTGTCCGGAATCGGTGTACACGCAAGCCGGAATCAGCGTTCATTTTCGACCGGAATATGCAAGGGTTACCTCTGCTAATATAATATATCGAACCATGACCGAATTTGATCGGGAAGAGGCTGGCAAATGGTTAGCCGCTCAACCCTGGGTGCTCTCATATCAGGTAGCCCCGCTAAGCGATGCCTGGTATGGCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCCCGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCCCGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //