Array 1 196925-200136 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHFU01000020.1 Acinetobacter baumannii strain MRSN31196 MRSN31196_contig00020, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 196925 30 93.3 30 ............................AA GTATAAAAAAGAAATTGTTCTTAAATTAAA 196985 30 96.7 30 .............................A GTCGGGGTCGAGGATCCGAGCACCTAATTA 197045 30 96.7 30 .............................A AAAGAAAAATAACAGCCCAAGCATAAGCAT 197105 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 197165 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 197225 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 197285 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 197345 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 197405 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 197465 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 197525 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 197585 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 197645 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 197705 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 197765 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 197825 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 197885 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 197945 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 198005 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 198065 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 198125 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 198185 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 198245 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 198305 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 198365 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 198425 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 198485 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 198545 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 198605 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 198665 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 198725 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 198785 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 198845 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 198905 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 198965 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 199025 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 199085 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 199145 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 199205 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 199265 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 199326 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 199386 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 199446 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 199506 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 199566 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 199627 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 199687 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 199747 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 199807 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 199867 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 199927 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 199987 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 200047 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 200107 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //