Array 1 66638-64658 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAHO01000007.1 Lactobacillus acidophilus strain DS8_1A DS8_1A_7_length_86407_cov_193.219877, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 66637 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 66576 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 66515 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 66454 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 66393 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 66332 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 66271 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 66210 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 66149 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 66088 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 66027 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 65966 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 65905 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 65844 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 65783 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 65722 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 65660 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 65599 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 65538 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 65477 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 65416 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 65355 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 65294 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 65233 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 65172 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 65111 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 65050 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 64989 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 64928 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 64867 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 64806 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 64745 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 64684 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //