Array 1 2672716-2675778 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP018437.1 Pelolinea submarina strain MO-CFX1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================= ================== 2672716 33 100.0 34 ................................. TCTGCGCGAACGTCAGCCAGGCGCAGGCCTGAAA 2672783 33 100.0 35 ................................. AGAATTGAAAGATTATCCTACATCATGGGGCTTTG 2672851 33 100.0 34 ................................. ATCATCGGGGAGCTTCCAACCACCAGGGATGATA 2672918 33 100.0 35 ................................. ATGTCAGGCGGGCGCACCGGCAAACCGGCTGCTTT 2672986 33 100.0 33 ................................. TGGCTACCCAAAAACGTATTGCAAGTACGTAAT 2673052 33 100.0 33 ................................. ATTGCGCCACTGGTCTTCTGACATTGAACCGCC 2673118 33 100.0 34 ................................. CGTTGCCGGATTGCGCGAGGGACTTGATGGAAAG 2673185 33 100.0 34 ................................. GTAATGCCGCGGTCACGCACAAGGAAGTAGAGTA 2673252 33 100.0 35 ................................. TGAAGCCATTTCCATATCATAAAGCGTGGAATTTA 2673320 33 100.0 34 ................................. AATGCCAATGGCCGCCCAATCGAAAGTGCTGGAA 2673387 33 100.0 35 ................................. AGACCCGGGAAGAAGCTGAACAACAACGTCAGCAC 2673455 33 100.0 33 ................................. AAAAATTATTGGTACAAGATTAATTAAAATATA 2673521 33 100.0 38 ................................. CTCGTGCTCCAGCAGATAATCGCGCTCAGGGTAGCCAC 2673592 33 100.0 33 ................................. TGGATGCTCGCGGTATTATGGTATCGCTGGGTG 2673658 33 100.0 35 ................................. TTCGGATTTCCCTTGCTCAGCAACTGCGCACAACT 2673726 33 100.0 41 ................................. TGTAATCGGTCGGCGTGAGCATTTCCGCATCGCGGAAGTTT 2673800 33 100.0 35 ................................. AAGAACAACCCCGGCGCGTATCATTGGTTTTTGGG 2673868 33 100.0 32 ................................. GTTTTCGCCTGTGGATAAGTTGTGGACAAGTG 2673933 33 100.0 33 ................................. CTCGATGATGTCGCGCATACGCCGGTCGGTCAA 2673999 33 100.0 35 ................................. ATAACAATGGATCAAGATCGGTTGAACGTCAAAAA 2674067 33 100.0 34 ................................. TTTCCGGTAATAATCCACCTGCTGGCGCGTGACG 2674134 33 100.0 33 ................................. TTTCATGCGTTAGGAATTACACGCCATCGCGCA 2674200 33 100.0 34 ................................. TACAATGTACCGAATATACATCGCCAAAATGTAC 2674267 33 100.0 34 ................................. ATGTTGGATAGCGTTGCGCAAAAACAGATCTAAA 2674334 33 100.0 35 ................................. GTTGAAAAACGGTTTTGTTTATATTTGGGATTCCA 2674402 33 100.0 34 ................................. ATACGAGCTAATCGGTAAATCAACGGGTGGAATA 2674469 33 100.0 33 ................................. GTAAACCACGTCTTTACAACCTTGACATCTGGA 2674535 33 100.0 34 ................................. AAAAAAGGCGCTGACGGAAAACCGGAAGGAAAGA 2674602 33 100.0 34 ................................. AATATCGAAAAGGTGTAATCTTAGTCCATGGAAA 2674669 33 100.0 33 ................................. TTGAATGAGAAACACGCCGAACTGACGGAGGCG 2674735 33 100.0 34 ................................. GTAACCCTGGACGCCCGCGCGTAGAAAGGATAAT 2674802 33 100.0 35 ................................. ACTACAATCATGGGCTTGACGAGACGCTGAAAAAG 2674870 33 100.0 37 ................................. ATGGAAGATTGCGACCCGCCAAGTGAACCAGAAGAGA 2674940 33 100.0 36 ................................. ATCGCCTGATAAATTACAGCGCACATTATCTTACAG 2675009 33 100.0 35 ................................. CCAGAACTGGAGGAGAAATGAACCGCGAGATAGTG 2675077 33 100.0 34 ................................. TAAACACCCTCGACCAATTAGAAAACCAGCGCGT 2675144 33 100.0 35 ................................. AGGGTAATCAGGATATTGTTTGAAATCGTGGGATA 2675212 33 100.0 35 ................................. ATAGGCTCTTATGGGCAGGTCTGTATATTGCCGTA 2675280 33 100.0 33 ................................. AAAGAGACGGCTAACAAGGAACTTGCGGACGGG 2675346 33 100.0 34 ................................. ATTGGACGGAGCTTTAAGGAGATTTGGATATGAC 2675413 33 100.0 33 ................................. ACTTGGTCGGGGTATACTTGGATGAGGTCAAAC 2675479 33 100.0 31 ................................. CCTTTAGCATTGTGTAAAAACTGCTTGGGAC 2675543 33 100.0 36 ................................. CCCGCCTATTGGGTGTTGGTGCTAATCGCTGTTGGT 2675612 33 100.0 34 ................................. ATATTTATAATAACCGTTATCGTTATAAACTGAC 2675679 33 100.0 34 ................................. TTCTGTGCCCTGGTGCGGTTCCAGATCGTCAATG 2675746 33 97.0 0 ..............................T.. | ========== ====== ====== ====== ================================= ========================================= ================== 46 33 99.9 34 GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT # Left flank : GGATGCATATCCTCCATTTTTTTGGAATTAGGAGCCAATGTAATGATGGTTTTGATTACTTATGATGTGAATACCGAAACAGAGGATGGGAAGAAGAGGCTACGTAGAGTAGCTAAACAATGCCAAAATTATGGCCAACGTGTTCAAAACTCCGTTTTTGAATGTATTATTGATCCTGCCTTATTTAAACGGCTGCAAGCCAAATTAGCTGAAATAATGAATAAGGAAAAGGACAGTATCCGATACTATTATCTGGGAGATGATTGGAAAAAACGTGTAGAACATGTCGGAGCCAAAGCCAGTATTGACATTGAAGCCACGTTAATTGTATAAACGCGAACCCAATGTGAACATTAATTTATTGTGGGATTCGCAGAAATTTGCATAAGTATTTTACGAAATAAATCAAAATAATAGCTTTTTTCAAAGGGAAAAATAGTTGGAGTTGCAGAGTAACCCAAGATATAGGGGGACATTGGTATAATTTGTCACATGTTGCA # Right flank : TTTTACGTAAAACTCCATTGAGGGCGCATTATTTCAACATACCAAAACTGTTTCCCCCACACGCTTGGGGTGTTCCTGTCAAGGGTATTTTTTAAACTGCACCCGGGTGCAGTTTTCTCTTCATACGTGGGGGTGCAGATCCTTCGGTCACTTTGTTCCCTCAGGATGACAACATTATTTTCTCCCGATCGAGAATAATTCTTGTGTTTATTCACAATTAAGAAATATTCAATCGGGCAAGATGTTAACCAAACGCGTGGGGGTGCAGATCTTTCGGTCAGGTTGTTCCCTCAGGATGACAATATTATTTTCCTTTTCTCTGAATAATTTTGTGTCCATTATTAGTAAAGAAATATACAATAAAGTAACTTATCGTTTTATCAAGGAGGTTTCAAGCATGAGCAGGAGCGAACTCATTGAAGTGGCACGGGGGGATAGACCCTTAGACTTAGTCATCCAGAACGTAAATCTGATCAATGTTTTCACTTGTGAGATCTACC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCGCATGGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCTCCGCAAGGAGGGCGTGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.20,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //