Array 1 12753-13140 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIJYT010000029.1 Enterobacter sp. NIC22-4 NODE_29_length_55752_cov_123.520359, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 12753 28 100.0 32 ............................ CTAAAAGTGAGTATTTGACCCAACATTACAGA 12813 28 100.0 32 ............................ TTTGCCTCCAGCTACTGCCATCGATAGAGTCA 12873 28 100.0 32 ............................ AGCAAAGACATTTAAGCCCCCACGCGCGATTT 12933 28 100.0 32 ............................ CGCATCGAGAAGAAGTAAACGCGCCAACGGAG 12993 28 96.4 32 ............A............... TGATCAATGCCTCGGAAATTGAACCCCTGAAT 13053 28 96.4 32 ............A............... AATCGACGACATCCCACGCGAAGAAATGCTGA 13113 28 71.4 0 ............A.......TAGGCTC. | ========== ====== ====== ====== ============================ ================================ ================== 7 28 94.9 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : CAGCTTGCTCAAGGGTTTTCGCTATGTATGCAGCCACGGTTTGTTTCATGGTTGTCCATCTCCTTTATGTGATATCGCTTACAAGCTTAGAAGAAAGTGACTGTATTGCCTGCTCTATACCCCTCAATTAAAAGTGGTTTTCCTGCGCTATTATTCAGCATGATCTGGTCATCGACTGGATGAAAACAGATATTATTTCAACGGGTTATGTGTTTTTTGAACGCTATTAATGAAAAGCTATAGCACGACGATTTTGGCAAACTCTTTTTACCCCTTGCCTTCGGCGGGCTGATGCTGGCGTTTTCAGGGGCAGGGCGGTTTGCGCGGGGAAAGGCCCGGCGTGGAAGTGAATGTTGGATGCTGGAATGCAGGAAGGGCGCCGCGGACCCTTTTTTATTGGTGGATTTTATTGTGCTGAATGGTAAGTGGTAAAAAAGGGTTTTTGAGAGATTTTTAGGGGAATTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCTG # Right flank : AACGTAGGCCGGGTAAACGTAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACAGGGGTTCGAAAGGCAACTGAGCTGGCCTGCACGGGCAAAAAAAGCCCGGTAGCGTTAACGCTTACCGGGCCTGCGGGTGAACAGCGACAGTTTATGCCAGAACAAGATCGCCCTGTGGATGGCATGAACACGCCAGCACATAACCCTCTGCAATTTCGGCGTCGGTCAGCGTCATGGTGCTGGTGACTGTATATTCACCGGAAACCACTTTGGTCTTACAGCAACCGCACACCCCGGCACGACAGGCCGCCACCACCGGTACGTTGTTGCTTTCCAGCGCTTCAAGCAGCGTGGTGCCCACGCGGCCAAAGAAGGTCTGCGCCGGTTGCAGCTTCGTGAACTTCATCCCGCTGGTCGCCGCTTCCGAGACCGGCGTGAAGAACTGCTCTTTGAAAAAGCGCGTCACGCCGAGCGCTTTCACTTCTTTCT # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 28255-28643 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIJYT010000029.1 Enterobacter sp. NIC22-4 NODE_29_length_55752_cov_123.520359, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 28255 28 100.0 32 ............................ GAAATTGTTGTTGGCAAGCTGGCACGGCGTAT 28315 28 100.0 32 ............................ ATCCCCTGGGCCACATCATTACGCCCGTCATA 28375 28 100.0 32 ............................ GTGAGTCGATGGTCGCAATAGCGGTTGAGGAT 28435 28 100.0 33 ............................ CTGTTCAAACGCTTCCTCGTCGTATTCGCACGA 28496 28 100.0 32 ............................ AGCCGGCGAAACTCCCGCAGGGGGATCAGTTC 28556 28 100.0 32 ............................ GTGAAATGGACGTATGGTGTCTGACGGTAGTT 28616 28 78.6 0 .....................AC.CCCC | ========== ====== ====== ====== ============================ ================================= ================== 7 28 96.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTTTCGCAAACGCAGCCCATTTGCCGTTGTCTCGGTGCTTATCTGGACGTAGTTAAAACCGAACTCGCAGAATCAATGTGTGACTTTCAGGTGGTTGAATTTGACGATGAGGCGGAACGGCCGAAAGGAAAAGAATGGCTTCTGGAAGATACCGAAACCAAGTGCGATTACTGCCGGGCATTAAACCACGTGCTGCTGGTGTCGCATTTTGACCGCGAGATGCTGCCCCATCTGACCGGATTGCTGCATGACATTACACATTCGATGGCGGCAGATGTGGCTGCACCTGAATGTGGAAAACCTGCAATTCATATCATTAATTGACAGTGGTGTAGCGCGTCGGAGGAGGGACTCCGGCGCGGCATGGCGAAACCCTTTTTTCGAGTGGTTCTTTAAGTTATTGATTTTTATTGTGCTAATAAAGGCCGCAGAAAAAGGGTTTCAGGTAGATATGTTGATTATTTTCTTTTCGAACAATAAGATGGCGAAGATTTGTTTCA # Right flank : CCAAACATTCATCCCAGCTATTTAAAAACCATAATCATCACCACAATCCTCGTTGTATTTTAAATAAACAAAATATTCATTCACCCGACAACCATATTTTCTCATATATATTATTCATAAAAATAATACATTAAATACGGCAGAGTTTTTTCATTTCGACATTACGGTATTTATTATTCATTTGATACACGTCACATTTGTCTTCGTCTTATCTCCGATAACATACCCCGCATTCAACACATTGAAATAAAAAGCACTTGCTATGCCAGCGAACAGCATTACCCCGTCCGACTTAAAAACCATTCTTCATTCAAAACGTGCCAATATCTATTACCTGGAGAAATGTCGTATTCAGGTCAATGGGGGCCGTGTTGAATATGTCACTCAGGAAGGTAAGGCGTCGTTTTACTGGAATATTCCCATCGCTAATACGACGGCAGTCATGTTGGGAATGGGAACATCCGTTACGCAAATGGCAATGCGGGAATTTGCGCGAGCGG # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 38501-38767 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIJYT010000029.1 Enterobacter sp. NIC22-4 NODE_29_length_55752_cov_123.520359, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 38501 28 100.0 32 ............................ TTCAAGTCTTCCACAACAACCATGCGTTACAT 38561 28 96.4 32 ............T............... ATGTTTTACATTGCGAGCGATGATGCTTTGTA 38621 28 92.9 32 ........T...T............... TGACCGACGTAAGGAACTGCCGGGACCTGACT 38681 28 100.0 32 ............................ TCATCAAGTGTGAGGCTGTGTGATTTTATTGT 38741 27 71.4 0 ......CA.......AC..A.AC.-... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 92.1 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : AAACGCGCCACACGTTCGCTTTCGTCGGGCGTCAGCGTCCGGCCCGTACTTTTGCGGCGGGCAACGTTACGCTCGTTGATCCCCATAACGCGTAAAATCTCCGCTTTCGACATGTCCGTCCACTCGTGAATATTGTCGAGGACGCTGACGGGTAATCCTTGATTAAGATATTCAATCAACCGCATGCCTCTGCTTGCAGGTAAACCGGCGTAGCGCCAAAGTGTGTTATCAGCTGGCCTTTGCGCAGGAACCCATGTTCTCATGATACCTCCAGGGTGATGTCATTTGTCATGGTTAAGTATAGTTATTTGTCATGAGATAGGGAACGGGTGTTTTTTGTTCAGGGTGGGGTAAAAGAAGGATGGTATTTGATCCTAATTTTGGGAAGGAATGTAATGTATTGATTTTTCGGTTAAATATCCTGGGGCGCAAAAAAGGGTTTGAGCAGGGATTTTAGCTTTTTTTGTATGAAAATCATGATGTTGAGAAGGTATTATTTC # Right flank : AGCCGAAACTAAACCCAACCAACCGTTCAAATAATCGACTGTCCTGACAAAAAAATAAGGCCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGTTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCCTCAATTAAGTAAAGAATTGCGCGTTTAAAACGCAGCAAAACAGTCTCAGCGTATTGCCCAAGCGTCACGGTACAACCGAACAGAAAGCGCATTCGTAAAGGGGAGACGA # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //