Array 1 138-966 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYG01000007.1 Weizmannia coagulans strain B4098 NODE_10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 138 30 100.0 37 .............................. GCGTGACATTGACGAGGCTGAGGGAGTGATCCTCGAT 205 30 100.0 35 .............................. TGGCACAAGAACGTGGCGCATATACACCGGTAACA 270 30 100.0 36 .............................. ATAATGCGGTCATTAAAGACGCAATGATACAGGGCA 336 30 100.0 37 .............................. TCGAAAGCCGACCCGATACGCGAAGTCGTTTACCGCA 403 30 100.0 37 .............................. AACGTTTCTAAAAAAGATCCAATGCTAATTGCTCGTT 470 30 100.0 36 .............................. ATCCGGCGCATCGGCATTGTGAACGCCGCAACCAGC 536 30 100.0 37 .............................. TGGATGAGCTGGGCGAATCGAAAGGCTACCGGCTCGA 603 30 100.0 37 .............................. AGATATTTCTCAGCCGCGCTGCTTCCGTCCAGCTCCG 670 30 100.0 37 .............................. CGCCGTATTCTTCAGCTATTACTTTCAGCGTTTTCTT 737 30 96.7 38 .................A............ AGTCGGCATGACTGAAATAATTTAGGCAGATTTTCATT 805 30 93.3 34 .......C.........A............ AAAAGAAAGAAGCACAGCTGGCTGCGCAAAAAAT 869 30 93.3 38 ....A............A............ CATTCCGGGCAAAGTTCGGAGAAATACCGGTCTGCCTT 937 30 93.3 0 .......C.................A.... | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 98.2 37 GTTTGTATTTTACCTATGAGGAATTGAAAC # Left flank : AATATTCGTCCAGCAAGCTCTAATTATTTAAATTATTACATATTTAGCCGCATTTTTGGGGGGGGAATAGTTAAATTATCACGAAAAATTTTTACTCCTCAGAGCTGATTCACTATAGTGTTTCCTCCCGGCGATTGG # Right flank : CCTGTAATCCCGCGGGTTTATATTGCCGGCAACACCTAAGCCGACATCTCCGCCGGTAACAGCTACGACTGGCGGGGATGTTGGTTATTGTTCTGTTTTCAATCGGCTGCTGTGCTCTCTCCATGTTAAGAAAAAATCGGAAAGGGAAGCGAGCAAAAACACAAGATAAATGATTAAACCGGGTGTATCTGATGCATGCGAATCGGAGAGGACCCGCGTTTTCCACTTTTTTGGGAAACATCGTTTGGTGTACCGCATCGTACTCTTTTTGCTGCCAGAAGTGCTGCCGGTAATAATTCCGGTTCCTACTGTTCCATGCAGCCTTGCATGCAGCTGCCTGGCCAGAAAGAAAAGAGCCCAAGTCCCGCCTGCAGGAATAATAAAACAGAAGCAAGCAGCCCTGCCCAAAAAAGATTTTAAAGTTTTTCCCATTGAAGGCTTGCTGAGCGAACCAGACAAAGCTTTATCTCTGGTTCGCTCAGCCGCAAAACTGGTTGATG # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0 Confidence: HIGH] # Array family : NA // Array 1 19479-20104 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYG01000065.1 Weizmannia coagulans strain B4098 NODE_95, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 19479 30 100.0 35 .............................. TCAATCGCAATAAACGCGGCGCCATCGCCATCATT 19544 30 100.0 35 .............................. ACGTGAATGAGCGCTACTTCGACGTCTGTCCGCCG 19609 30 100.0 36 .............................. GCGGTTGACTACGTTGATCGGGCGAAGGAGTTGCAA 19675 30 100.0 38 .............................. ATACGGAGGTAAACGAATGTCTTTCGAATGGATTTCGT 19743 30 100.0 39 .............................. AAATAAATGCCTCTCTCTCGCGTGCAGACAGCCTATGTT 19812 30 100.0 36 .............................. ACGGTTTACATTTCTGCTCGATAAATCGAATCGGGC 19878 30 100.0 36 .............................. CGAAAATGCTCTTCCGCAATCTAAAGCGTCAATCAC 19944 30 100.0 36 .............................. GCGGCGTACAAAGTGAGGTTACAGGTGCAATTACCG 20010 30 100.0 35 .............................. AGAGGTAAAGCCCCTGCCAGTGTAGGCGCAGCGGA 20075 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 10 30 100.0 36 GTTTGTATTTTACCTATGAGGAATTGAAAC # Left flank : TTTGGCCGTTATTAAATAGGGCTTGCTGAATAAGCAAAAATCCTAGAGTTGTAAGGGTTCTGTCAGTTTTTGCTAAGCTTTAAATGCAAGGGTTTTTTGAAAAATGCAGGAAAAGTATTACACCTGAAAGCTGATTCATCGTAAAAGACGGCGGAATCTGGCATTTTCGCAGATGCATTTTTCTATAATATGGAGGCAGCGTTACAATTGCAACAGGACGAAGCCTCCTTCTATAATATTGAGGTAGCGTTTACTGGCAAATCGGATACAACCCAAAATCCGATTCGTTCAGTAAGCCCTAATAAGATACTCGTCAAAAATGTCGTCGCCCCCCATTAGCGTAGAAAACCCGGGGGATCGACGACAAATTGTTAAAAACGGATAAGCCTTTGACACTATTGGTACGGCTGTATTCCATTGGATGTTAAAGAGATTTTTTTGAGAAAGCAGGAAAATCCCACAGTCATGGAGAAATGTTATAATATCAATCATTTTATGGG # Right flank : CCGCCTTCGCAAACCGGGTAATGTATTCCATCCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 2998-34 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYG01000088.1 Weizmannia coagulans strain B4098 NODE_155, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 2997 30 100.0 37 .............................. TCGCCTAACGAACCGTCTTGACCAAGCCACTTATTTT 2930 30 100.0 37 .............................. CTGCCACTTTCACACCATTTTGGGTTGATCGTTTCAC 2863 30 100.0 38 .............................. CCGCTAATCGCCGATTGCAATCCCTGCGCTGTTTTCGT 2795 30 100.0 36 .............................. TCAAGAGTTTCAGAAACGATTGTTCCATCTCCGCTC 2729 30 100.0 38 .............................. GAAGATGCTGAAAGCAAGATTACACAAAATGCAGATTC 2661 30 100.0 35 .............................. TGACGCTATGGCCATGAAAACGGTCATCCGCAACA 2596 30 100.0 36 .............................. AGGCAAATCGCAACGGAATCCGGCGGAAACCCGGCA 2530 30 100.0 38 .............................. ACGGCATCCAATGGCAACTAGTTGTAGATGCAGATACA 2462 30 100.0 36 .............................. TCGGCGAATGACTACGGCAAAGAATCGCTGAATTAC 2396 30 100.0 37 .............................. CTGTGCCTGCCGTGCTTAAAGCATCCTGCGCCGCATC 2329 30 100.0 38 .............................. GTTTATCCAATGCAGAAGGAAACATTAGTACACTCCAG 2261 30 100.0 35 .............................. CATCTAAGGCGGATAAATCCTATGTAGACACGCTA 2196 30 100.0 37 .............................. GACAAGAAATATAAGCAGAATTACCATAAAAGACTCT 2129 30 100.0 37 .............................. CTGTTATGTCGTGCTGTTGGTATTCGCCGTAGCCTTT 2062 30 100.0 36 .............................. GCGTTTTGGCTGATCAGTGTGCTGTGATTATCCACG 1996 30 100.0 36 .............................. TACAACAGATATTACAAACATAAATAACACGTTGAG 1930 30 100.0 37 .............................. GCAGCATAACGAAACCAGAACGGATTGACCAGGCTTC 1863 30 100.0 35 .............................. AATTTCCTTACCAAGCTAATAAGGTTTTGGATTGG 1798 30 100.0 40 .............................. CCGGGTAAAATAAGCCGGAGCCGGCAATAATAAGAATCCA 1728 30 100.0 36 .............................. AAGGCAGATAAAACCGTTGTGGACACGCTAAAAAAC 1662 30 100.0 36 .............................. CGTTGTAAAAGCCGTTTTGGTAATAGTAGGAAAGCT 1596 30 100.0 40 .............................. CGTAAAATTTAACAACATCCTTTCGCCGCTTCGGTTTCTT 1526 30 100.0 36 .............................. CGTTCTGATTCGACAGCGTCAAGCGCGGTGCGGAGT 1460 30 100.0 37 .............................. GCAGTTTAGTTTCCCGCCGCATTTCATCCTGAACGGC 1393 30 100.0 36 .............................. TGAGTATGTGGATTGAAATAAATGCACAAAAATAAG 1327 30 100.0 36 .............................. CATCCACAACCTCGATGGATCCATCCAAATGGTGAA 1261 30 100.0 37 .............................. ATTTTAAAATGGACGGCCAGGTGCAGTATGCAAAAAC 1194 30 100.0 36 .............................. TAACAAATGGGGGATCAGGCGGCTGCAATAGAAATT 1128 30 100.0 35 .............................. AACAGATGCGTAATCACTTTCTGAAGACTGGTGAA 1063 30 100.0 35 .............................. TTGTTCCTCCCCCTTTTTCTTGCAACTCCGTAACT 998 30 100.0 39 .............................. CTCGTTTTGCGCTGACTTTGGTAAATCGTTCAATTTGCC 929 30 100.0 35 .............................. ACACCTCAAATTTTTCTTTGCCATTGCGCACCCGT 864 30 100.0 37 .............................. CTTCAGGAAGCTTTCGAGAAAAACGGTAAAAAATACC 797 30 100.0 36 .............................. ATCACCCCATTTTCATCCCTCGTCTTCTTCCAAGCT 731 30 100.0 37 .............................. AATTCCATAGGCCTGATTCCTTTCGTAGATAAAAGCC 664 30 100.0 37 .............................. CGGCCTGAGCGTGCGTGCGTGGGTAAAATGTATTTCC 597 30 100.0 35 .............................. TAGGAAAGCGTATCGCCCTGCAGAATGACCGCATC 532 30 100.0 38 .............................. CGGTCATGTACGAGGAAATGCCGGTGCTGATCGTGAGG 464 30 100.0 36 .............................. TGGATAAGCGCGTACTCTTGTCCGCTTACCATAATC 398 30 100.0 39 .............................. GGGGCTGCCAGCCGAATTTGGGCAAGGCGAAACATCATC 329 30 100.0 36 .............................. ACCATATGAAAAACCGGCTCATTTTGAAAGCAATGA 263 30 100.0 36 .............................. CCGGGGCGTTTGGCTCTCCATCCGGTGCTGGTTCGG 197 30 100.0 37 .............................. TCCAAATTGATAGCGGCCCGGCCGTGGTAGATGGAAA 130 30 100.0 37 .............................. AAGCACAGGCGGAACTGGACCAGCACATTATTGAAAA 63 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 45 30 100.0 37 GTTTGTATTTTACCTATGAGGAATTGAAAC # Left flank : GGGATGCCGGCGATTGTGCCGACTTCTTCCATT # Right flank : CCCGCGCTGGTAACGACTCCCGCATCAGAGACGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATTTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [20.0-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA //