Array 1 430881-431947 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKJY01000002.1 Streptomyces griseus subsp. griseus strain 51e NODE_2_length_885236_cov_10.5114, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 430881 29 100.0 32 ............................. CCGTTGGCTGACCAGCACGGTTCGCGCGCGAT 430942 29 100.0 32 ............................. ATCAGCGGCCCTGGAGGGTCTTGGCCACGCGG 431003 29 100.0 32 ............................. ATTGCTACAACCCCCCAGAGTTGAACATGCGC 431064 29 100.0 32 ............................. AGATCGGGACCGTTGGCCGTGGGCACGTTCTC 431125 29 100.0 32 ............................. GTCGCCGAAGCAGTTCGCATCATTCGACCGGA 431186 29 100.0 32 ............................. CGCCAGCGACAAGTTGATGTCCCGCTCTGCAA 431247 29 100.0 32 ............................. CTTACGTCACTTGCATGCCGCGCGGGAGGATT 431308 29 100.0 32 ............................. CAGAGGCACGGTGATGGCAGCGTGGGTGGAGG 431369 29 100.0 32 ............................. TGCACTCCGTCCGCGACGCCCACGGCCGGGTC 431430 29 100.0 32 ............................. GACTGCGGCTCCGTGACCATCGGCACGACGAC 431491 29 100.0 32 ............................. GATGTCGGCGACGGCATCCGGTCCGTGGCGTC 431552 29 100.0 32 ............................. CACTGCGACGCCAGCTCACTCGATGACCCGAT 431613 29 100.0 32 ............................. GGACCGCCGTCGGTGATCACGGCCGCCACCAG 431674 29 100.0 32 ............................. GCGGCAGCTACCAGTTCCGTGGCGTCGACTCT 431735 29 100.0 32 ............................. CGGCAGGGCCCCAGGAATTCGACAATCGCCAG 431796 29 96.6 32 ........................C.... GGAGCCGCGAGACGGCCGGCCGCACCCACCGC 431857 29 100.0 32 ............................. GAGCACGACCGTTCTGCGCTGTCGTGAGTCTC 431918 28 82.8 0 ..................TCC...-C... | T,G [431936,431946] ========== ====== ====== ====== ============================= ================================ ================== 18 29 98.9 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : TACAGAAACCCCCTTGATCCGCGGAGACGCGATCAAGGGGGTTTCTGCGTTGGGTACCTGCTCCATGGCCCGAAGGCCATGGCTGACTAGCGGCCCTGCCCATGGCGGGACCATGCGCACGTGCGGCGTCCGCGTACGCGCCTGCGGACGAGACCACCGCAAGGAAGTCCGCCGTATCGGACGCGCTCACGAACCACCTGTCACGCCCCCTCTCTCGGCTGACCGTCATTTCCCCAACCGAGATCGCCGCCGCCGACGCGTCGAAGCCGCTGAGATGCGAGCCTGGACGGCCACCAAGCGTCCTGGCCGCGCTCGCGGTTGCCACGGTGACCACCACTCTCTTTTCAGGAGGCTGCTCTTATGGACTGAAGAGAGGCAGAATGACTGCTGCCGCACAGCGCTCTGCGAGTACGATCACCTTCGAGGTGGGCGATATGTCTCTTTCTGAAGAAGTAAGTAAATTCAGCTCCGTCACCTCATAAAACCGCAGGTCACGAAGT # Right flank : CGTGATCGTTGCGTAGACGCGCGGGGTCCACCTCAAGAGCGTCCGCGACCGCTTTGAGCACCTCGTCGCTGGACCGTCGGACACCTCGCTCGATGGCACGAACCATGGCATAGGAAACGTGGGGGGCGCCGCGAGTTCGGTTTGTGTGAGCCGGCGACAGGCGGCGATTCGCCTGCCGATTTCCTGCGGACTACCGAAAGACACCCGCTGACCGTACGCACACGAAGAGTTTCCGGCGGTAGATTCCTCTACTTCTGTGCGATCTCGATGAGTTACGTCAGTGACTGGATCACCCAGTCGGCAGTTGCGTGCACTTGGTGGTCACCGCCCCATAGTGCCCCCATGGGCCGCGGCGGATAGGGGCCATGCGCAGCCCGGCCTGGCGGCGGGGAATGCGTCGTTCACCGGGTGATCACCGACGTACACGGTTCCTCCCGCCGGAGCACCGGACGTGTCGAGGATCCGTTCGAAGAACTGCGCCGACGGTTTGGCACAGTCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 435091-436157 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKJY01000002.1 Streptomyces griseus subsp. griseus strain 51e NODE_2_length_885236_cov_10.5114, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 435091 29 100.0 32 ............................. GTCACCGCCGTCGACATGAGCGACGACCTGAC 435152 29 100.0 32 ............................. CACCGGTTGGACCGACAGCGCCGGCCGCGCCT 435213 29 100.0 36 ............................. ACCGGGCAGGACGTCCTGACCCGGGTGCGCGCCGAC 435278 29 100.0 32 ............................. ATCGCCGAGGCCGACACCTACGGGCCCGCCAC 435339 29 96.6 32 ............................G TGCTTGAGCAGCCCGAGCAACGTTGTCGCCGA 435400 29 96.6 32 ...........C................. TCGGGCGGGCGGAGCGGGCGCGCAGCACCCGG 435461 29 100.0 32 ............................. CGCGACCTGAACCGCATCCTCGGATGGCCCGA 435522 29 100.0 32 ............................. TCTCGCCCCGCCCCGCCGGGCCCCGACCGCAT 435583 29 100.0 32 ............................. GGGCGGGGACTGCGTATGGCGGGCCCCCTCCA 435644 29 100.0 30 ............................. GGCGCGCAGTCCCATGGCCGCGCCCCTCTA 435703 29 100.0 32 ............................. GCGACACCGCCCCTGACCACTGGAACAACACC 435764 29 96.6 32 ..............C.............. CCGCCGCCGGTGAGCCAGCCGAGGGGGATCTC 435825 29 100.0 32 ............................. CGCCGACCGACTGCTCAAGGCCCTGCGCGACG 435886 29 100.0 32 ............................. TCGGCGTGACCGGACCTCAGATGATGGGGGCC 435947 29 100.0 32 ............................. TGACGCTGACGCAACGAGCCCAGCAGCGCCCA 436008 29 100.0 32 ............................. AACACCCTGTTGTAAGAGGTTGATGTGAGCGA 436069 29 100.0 32 ............................. GACGACGAGAGGTCGTGGTCGTAGGCGAGCAT 436130 28 93.1 0 .....................C.-..... | ========== ====== ====== ====== ============================= ==================================== ================== 18 29 99.0 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : CCCCGCGCCTTCCTCCATCACCGCCTCACCCACAAAATCCCACCCCGGCTCACCACCGACCATGCACAACCCCCCGCCCCCACCCGCCGCATCCTCATGGAATGCACCGACTGCGGACGCCCCGGCCCACCGGAAGCCCTCCCCGACGGCCTCTGTCACCCCTGCCGCACAACCCACACCGCAGACCCCGAAAACACACCCCACCCCGCCGACATCGCCGACATCAGGGCCCACATGAGCAACCTCCGCAGCCTCCTCAAACCCGTCTGAGCTCAACAACCCGCCTGCCTCACAGCCCCGGCACGGACAGGCCTCAGCGAGGTGCACCGACGTCCTCCTTCAAGAGGCCGCCTCTCGCCGCCTTGGAAGGGCAGAATCACTCCCGACACGCTTAAAGCTTCGAGCAGGCCTATGCACACCAACCAGAGGGCGATATGTCCATTTCTCGGGAAGTTGTCAAAAAGCACCACGCGCCTGAGTAAACCCGCAGGTCACGGACT # Right flank : CATCCGGTCGACGGGGTAGAAAGACGCCCCCCTTTGCATGGGCCCGACGCGCAGGGGCGCTCCCCCACAGCACACTCGATCAAATACGCGCACTTGTATTCACTCTCGGTCATCGCGACCGTGCGGGACGTCGACGATGTCCAATACGCCCATGAGCCGCGATCATCCGGAAAGCCTTTCGGCATACGCCCGCCTGTCCCCCGTATCCCGCACCGCCTGGGGCAAGCACGATCGGCAGACCGAGCAGTGGCTCCCCCTCTGGCGGCACATGGCGGACAGCGCCGCTGTCGCGGAGCGGCTCTGGGACCAATGGGTGCCCGACAACGTCAAGGCGCTCATCGCGGACGCGTTCCCGCAAGGCGCTCAGGACGCCCGGCGAGTGGCCGTCTTCCTCGCCTGCGTCCATGACATCGGAAAGGCCACACCCGCCTTCGCCTGCCAGGTGGACGGGCTCGCCGACCGGATGCGGGCAGCCGGGCTCTCCATGCCGTATCTGAAGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 446140-447325 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKJY01000002.1 Streptomyces griseus subsp. griseus strain 51e NODE_2_length_885236_cov_10.5114, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 446140 29 100.0 32 ............................. ACTACGCCCGCAGCCCGTACCCGATCAAGCCG 446201 29 100.0 32 ............................. CACGCACACACGGAGGCCCGCCATGGGTGACA 446262 29 96.6 32 ............................T CCTCGCCGGAATCCTCCTCGGCCTCTCCCAAG 446323 29 96.6 32 ............................T TCGGCGGGGGTGTTGATCGGGGGCCCGTGCAT 446384 29 100.0 32 ............................. ATGCCCCAAGCGCCTATGTGCCGGGTCTACGA 446445 29 96.6 32 ............................T CCGCGGCGCTCGTACGGCATCCACTCGGCCCG 446506 29 100.0 32 ............................. TCGGCCTGTGTCAGGCGCCCATGTTTCTGCCA 446567 29 100.0 32 ............................. GTCCACTCGGGCTCGACGCCTTGTTCGTCGAG 446628 29 100.0 32 ............................. CGGCCGGACACGTACTGCCAGATCTCCGGGGA 446689 29 96.6 32 ............................G ATCATCGGCTGGACTACAGCCGCTTGGGACTG 446750 29 100.0 32 ............................. TGGACGCTCAGCAGGGGGGACATCGGCGTGAG 446811 29 100.0 31 ............................. AGGCCCTTGTGGGCCTCTTGTTTCGTGATCC 446871 29 100.0 32 ............................. CTGCGGCAGATCGCGGGCTCGTGGACCGTCCC 446932 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 446993 29 100.0 32 ............................. TGGCTGATGCCTGCGTTACGCGGCCGGAGCAG 447054 29 100.0 32 ............................. TTCTCCGGCGCCGACCAGGCCCGCACCGTCAT 447115 29 100.0 29 ............................. GGGGGCAGCCTGTTCCCGTACGCCGACGC 447173 29 86.2 33 ..C...T..C..............A.... CCGAGGACGGACGCGCGGGACTTGGTGCGGCCG G [447178] 447236 29 93.1 32 .............A.......G....... AGGTCCCGGCCGCAGTAGTCCTCGACGAGCCC 447297 29 93.1 0 ...........................TG | ========== ====== ====== ====== ============================= ================================= ================== 20 29 97.9 32 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : GTCATCGTCCTCACCAATTGCCCGCTGGGCCTGAGGGGTTTCCTCACCCGCTGGCTGCTGGAGATCTCCCCGGGCGTCTTCCTCGGAGCCCCGTCCACCCGCATCCGTGACCTTCTGTGGACCGAGGTACGCACGTACGCCGGCCAGGGCCGTGCCCTGCTCGCCTACCAGACGGACAGCGAGCAGGGCTACGCCTTCGAAACCCACGACCACACCTGGCACCCGACCGACCACGAAGGCCTGACACTCATCCACCGCCCGACCGCCCGCGTCCCACGCGCGGAAAGCCCGGGGAGCCCGGGGAGCCCGACGGTCGATGTACCCCGCCAGGGCTGGAGCAAGGCGTCGAAGCGACGGCGGTTCGGGGGCGGGAGGTAGCCGGGGGTGCGAGGGCAGGGATGGACCGATGTCCGATAGAGGACACAAGGACGGATATGCCGGAATTCGGAGAAGTGAGTAAAAACAGGACTCCGTGTACATAGAACACCAGGTCAGCGAGT # Right flank : GCCGCAGACGGTCAGGCCCGTGTGCGTGCTCTCCGTCTCCTCAGGTGCGAGGTCGCTCTCTGGTCGGGCGGCTCCCGCTCTCCCGCTGGACGCCCAGGGGGCTCACGGCGGGAAGCCTGCGCCGGTCGTCGCCCTGCCTTCGATCGCGGTCGCCGCCGCCCGTCGCGCTGCGGTCGGCGTACGGCGGAACGGCAGAGCGCCCGGCCGCCGTACAGAGAAGGTACGGCGGCCGGGCGCTCCGGTTCACGGTTCAGGTCGGGGGAAGCGGCATCGGGGGGACAAGCCGCTTCCCCCGGTGAGAACAGGGCCTGCTGGTCCTCCGCCGCGGTCAGGGGGGATCGCGCGGCGGTGACCCCACAGAGAGGCCCTGTTCCGGGCCCTCCGGGTCCTGCCTGGTCCCGTTGGGCTCGCTCTCCATCCTGCCGGGCGGCGGGAGCCGTGTGGTCGGGCGAAAGGCCTCGATGGTGGGGACGTAGGTCCCTAAAAGACGCATCAGTGAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //