Array 1 4106-4376 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHEX010000091.1 Enterococcus faecalis strain MEZEF158 91, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 4106 37 100.0 41 ..................................... AATACAGAAAACGTAGAGAATTTAAGTGAGATGTTTAATGG 4184 37 100.0 41 ..................................... AATACAAAAAAAGTAAAATTAACAAGCATGATGTTCGAGGG 4262 37 91.9 41 .............G..................AT... GATCTGAGTTCCGTAAAACATACGTATAATATGTTCAAGAA 4340 37 94.6 0 ................................AT... | ========== ====== ====== ====== ===================================== ========================================= ================== 4 37 96.6 41 CTGTTCGTCTTTAAAAAGTTTAGATGTAAGTAGATTT # Left flank : ACAACTGAAACACAGACGCAACAGGAAACAACAAATTCGACAACAGAAGCCACTTCTAAAGAAACGATGCCAGAAGCTAAAGCAACAGCTGAACAAAACTGGTCTGCTACATGGGATCCATATCATCAAAGCTATCACCTAGAACAGTATCTAGGTACAGATCCTGCGATTGTCGTACCTAATGAATATAATGGGAAGCCAACGGAGATAAGGTGTGACAACGGAATTTCATGCCAAAAAATAAGTAAACATGATGTAACATCAATTACATTTTCAAATGAAAATGGAAAAAAAGTAAAATTAGAACCTACGACTCAATACACTGATTTTACTATGAGAGATCATTATTTATTGAGATATTTTGATGGTTCTGGCTTAGATATTTCTCGTGCTCATAAGTTGCACATGGCCTTTTATGAGGATAGGCAGCTAACTACAATTAAAGGTCTAGAAAATTGGGATACAAGCAATATAAAAACTATGTATGCTATGTTTGTTGG # Right flank : TGATCTGAGTTCCGTAAGCTTTGGATATGATATGTTTAAAAACTGTATTAATTTACAATTTTTTGATGCAAGGAATTGGAATATTCCTTCTACAGTAGTTGATATTTCTAATATGTTCTCTATAGATAATGGAGAAGCGCCCTTAGTAATTTTAGGAAATGATGACCGATTGATACAAGGGACTACAAAAAATCGCTATCCTGGAGGTCCAAAATTCGTTGCGGGAAATAATGGGTATTTTGGAACGGTCGAAACTAAAGAAAAGTATTATTTTAACATGTTAGAAAAGGATCCAAAAAAACTAGAGGTTGCCTCATTTGAAGCTTTTAAAACAAAATTAATTCCTGAAGTAGTAGATTCTACTACTAAATTTTTAAGATGGGATGGGGATAAGATCACTACTAGTGAAGAGTTAGTAAAAGAGCACGTTTACCAAGCAAAATATCTGTTTGATATAACTGCCCCAGGAGATGGGGATCAAAATGTATTGCCTTCAAGTG # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCGTCTTTAAAAAGTTTAGATGTAAGTAGATTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 12687-12188 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHEX010000007.1 Enterococcus faecalis strain MEZEF158 7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 12686 37 100.0 29 ..................................... ACAATATATAAACCAAATTTAATACGGTT 12620 37 97.3 29 ....................................A AAAATTGCAAACATCAATCAACGCAGTAT 12554 37 100.0 29 ..................................... AACGCCTCAGCAAGATATCCAATATCGGT 12488 37 97.3 29 ....................................C AATTCAGAACGAATCGCAACTAAAAGAAA 12422 37 100.0 29 ..................................... GCTCCTTTTCTATTAATTTTCTTAGTACA 12356 37 94.6 29 ..............................T.....A TTAAACAAAGTACAAATCCATATATATCA 12290 37 97.3 29 ....................................A ACCACAACTGTTGTTGTCACTACTGAAGA 12224 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 8 37 98.3 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : CACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTAACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTATTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAGAAAAAATAATTCTCCGAG # Right flank : TGCGGTATTATTCGTAGGTTTGCTTTTTTGTTTTAGAATCATGTTGTTTGGTTTTCGCAGATACGATATGATTGATGTAAAAATATCGTTGATATGTATAAATGTGATTGTTATATAAAAAATATAAGTAATAAATTGAAGCTTTGCTAGAGCAAGTGATGCGATTACGAAATTATTTAATTTTAGAGTCACGTTACTTATTACTTTACGAATAGAGAATACGATTATCTATAAATCAAGAACTAATCCCCAATTTATTGAAAATGACACTCCCTGTTTTATTAATATTTCATGCTTTTGTTGTACTATTTGATGATACAAAAAAGTAAAACTGAGGACCCAATTAAAGTCAAGTTAACCACATTGAAAGATAAACCTTTCAATGTGGTTAAAGATGCTTAATGAGATTCATGAAACATAGAAAGCGGATTAATTTCCTATGCTCTTTATTTGTATATTTTCTTGGGAATCATTATTGATTGTGGATTAAAAAGATAATC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 1 4178-4346 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHHEX010000031.1 Enterococcus faecalis strain MEZEF158 31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 4178 37 100.0 29 ..................................... GAAATATATGAAAACACACGTTGATGGGT 4244 37 100.0 29 ..................................... TCGATATATTCTGCACCATAAAGATCCCA 4310 37 97.3 0 ....................................A | ========== ====== ====== ====== ===================================== ============================= ================== 3 37 99.1 30 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACC # Left flank : ATATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACATTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATAGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : AAACTTTTTTGATTTGGCTTTTTCTCCCCTGTTTTATAGTCATGTTGTTTAAAAACAAACTATCACTACAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGGAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //