Array 1 66925-65257 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPSC01000014.1 Streptomyces sp. WAC06128 AA000298-14_WAC06128, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 66924 29 100.0 32 ............................. CTTTCGGGGTGCCGGACGGTGGGGGAGCGGTC 66863 29 100.0 32 ............................. CCCTCGGGGCGGTTCATCACCCGGCAGTCCGG 66802 29 100.0 32 ............................. TGGTGTTTCGAAGCCCTTGGCGGGGCCTCGGA 66741 29 96.6 32 ............................G AACCCGCCGGATACGGGCGGAAGGCACGACGA 66680 29 100.0 32 ............................. GAGCACCTCGAGCACGTCACCGCCGACGAGAC 66619 29 100.0 32 ............................. TCACCCCCGGCCGGATCGGGCTCCGCACCAAC 66558 29 100.0 32 ............................. TTCTGGGGGCAGCTGTCCGCGACGTTCGGCTC 66497 29 100.0 32 ............................. TGCGCGCCGCCGCCGCCACGGCCGGCCTCGAC 66436 29 100.0 32 ............................. CCGATCACCCCGCCACCGGCCGGCGTGTGGAC 66375 29 100.0 32 ............................. GGCTTCAAGGATCAGATCACCTCTGTCCAGGA 66314 29 100.0 32 ............................. CGCAGGTCGATGTGACCGCCGTCCGGCATCCG 66253 29 100.0 32 ............................. TACTTCACGCCCGAGGACGACCGCGCGGCGTT 66192 29 100.0 32 ............................. CCCCTGGGAGGCGGGATGACCACCCTGCACGA 66131 29 96.6 32 ............................T GTGGTGGAGGCCGGTTGGCGGTCCGGCCGGAC 66070 29 96.6 32 ............................G CCCCGGCTGGAGATAGCCGCCGTCGTCGTACC 66009 29 100.0 32 ............................. GTTCCGAGCGGGACCCATTCCTCCGCCCCGTT 65948 29 100.0 32 ............................. AGGCTCCCCAGTCTCAAGGCGATAGATCCAGC 65887 29 96.6 32 ............................G TGCACCCCGTGCCGACCGGGGGAGGACGGCCA 65826 29 96.6 32 ............................T CCGCCTCCGCCCTGGAGGTACTTCATGGGGTC 65765 29 100.0 32 ............................. ACCGTCTGCATGAGCTGCGTGCCGGTGTCGAT 65704 29 96.6 32 ............................G ATCGACCCGCGCGGCCCGGTGGAGGAGTACGG 65643 29 100.0 32 ............................. GTGTCGGGCCCGGAGGAACGATCTTTACGGCC 65582 29 100.0 32 ............................. GTGAAGTTCGCCGGGATGCTGCCGGACGCGAC 65521 29 89.7 24 .................A..C.......A CTCCATCTGGACGCTCACGCGCCG Deletion [65469] 65468 29 82.8 32 .C.C..G...TC................. GGAATGAGCGCGGCTACTGACCTGCACGTACG TG [65459] 65405 29 89.7 32 ..T...............A.........G GCGGAGCTGTCCGGCTCAGTGGGGCCCGCGCT 65344 29 93.1 30 ......................G...C.. TGCCTCCGTGGAGGCGTGGACCTCGACGCG 65285 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 28 29 97.6 32 GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Left flank : GACGGCGACCTGCCGGACGAAGACCTCGGCGCTCTGTGGGACGACAGCGACAGCATGGTCAGCGGCGGCCGCAACTGGAGCGCCACGCACCACCTCGACATCCTCACTGAGCCCACTCCTGCGGAGCCGGCCCCGTGAGCGCCGGGACGACCGTAGTCGTTCTCATCGCGGCCCCGCCCGGGCTCCGGGGACACCTCACCCGCTGGTTCGTCGAAGTGGCCGCCGGCGTCTATGTCGGCAATCCGAACCCTCGCATTCGTGACCGCCTTTGGACCCTCCTTGCCGAACGCATCCACGACGGCCAAGCCGTCATGATCGAACCGGCGGACACGGAACAGGGCTGGACGGCCCGCACGGCCGGCCGTGACCGCTGGACCCCCATTGACTTCGACGGCCTGACCCTCATAGCCCGTCCACGTCAGAACGGACAGCCCTGGCGCCCTACAAACGAGGTAAAGCAGAATGGCATGATCAGCTGATAAAGCCGCAGGTCACGAAGT # Right flank : GTCGGCTGGTCCCGGCCGCCGGCGGCAGCGTCCTCCCGCATTTCGACGACATCCTCGCCGTGCGGCTTCTCCGCTTAGATGGACGCTGCGCCTGCCACACTTCATGAATTCACAGTTGTGCTTTCCGCGACAACAGCCAGATGTAGTACCACTTATCGTGTTCCAGCGTCTTGCTGCTGTTTTCGGACATGGCGTTTACCACGCTCCATACTCCACCTGTAGCGCCCATGATGGTAAGAGCCGTTGCGAGTGCAGGACCGTAGACAGCGACCAGCGCGGCGGAGAGCGTACCCACGACGGCGCCTGTGACCTGTACCGATCGCTTCGATCTGATGCGCTTGAGCTGGGCATGCATGTCGTGAACCTGAGTCGAAATATCCAAACCGATCTTCGCCAGCTCCACCTCTGAATCGACAGCATTGAGGGCTGGATCGATGTCCAGCAGCTTGAGGCGAAGGAAGTCCCTGAAGGACGCGTAGGAGTCGAACTCGTCTCTGGTG # Questionable array : NO Score: 6.12 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCCGCGGGGGTAGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCCGCGGGGGTAGTTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 77423-78186 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPSC01000014.1 Streptomyces sp. WAC06128 AA000298-14_WAC06128, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================== ================== 77423 28 100.0 33 ............................ CACGCCCGGCGCGCAGGGCATGGACGTCTACCC 77484 28 100.0 32 ............................ CCCCCTCCTGGTGAGCCACGGTGGACCCTGTG 77544 28 89.3 33 ...........G..T........T.... GCACCCTTCGCTCTCCGACCGCATGGCCGAGGT 77605 28 85.7 37 ...........G..T........T...T GCTCCATCGTGGAGACGGTGACGGTCGACCTGGTGCA 77670 28 85.7 34 ........G..G.T.........T.... CATGGGTGGTGAGGGTGAGCTTGAGGGTGACCTA 77732 28 96.4 32 .............G.............. CCTGGTATCGGGCGACGTCGGCCGCGCCCTGA 77792 28 82.1 33 TGG.....T....T.............. CACGGAGACCACCCTGATCCACAGGGCGCTGCG 77853 28 82.1 33 ...........G..T......T.T...T ACTCGGAGGGTTCGACTACGCCACCGTCAGCGT 77914 28 92.9 33 ...........G..T............. CCCGATGTACGGCTTGATGATCGTGTTCCACAG 77975 28 85.7 33 ..............GA......C...C. GCACCGGCTCGCGGGCGAGGAGGCCGCCGCCAA 78036 28 82.1 33 ...........G..T..C...A...T.. TGACAGGGTGTCGGCCGGGATGATCGCGACGTG 78097 27 85.7 33 .C...-...A......A........... CGACGCCATGGTCGATAAGATCGCCGCCCTGCT 78157 28 82.1 0 ...................CCT....GA | C,C [78175,78182] ========== ====== ====== ====== ============================ ===================================== ================== 13 28 88.4 33 GTCGTCCCCGCACCCGCGGGGGTAGCTC # Left flank : CCCGCCGGCAGCCGCCCCCACGTCAGACCCGCCGCCAGCACCGGTACGGCCTCGGCCGCATCCATGGCTTGAAACGCCGGGCACGCCTTACCGCAGTCGTGGATGCCGCACACCCACATGAACCACGACCGCCCTCGACCCCCGCTGACCTCATCCAGCCGCCGCCGGAACGCAGCCGACACGTACTGGTCCCACATCACCCCAGCCACAGCAGCCGTATCCAGCAGGTGCCCCAGCAGCAGATGCGTCCGCCCACCATTACGCGCAGCCGACTTCCCCCACAACCGCGACACCCTCGTAACGACCTCATCGGCCAGGCCCATCGACCGCATCACCTCAACGACCGACCGCTCATCCTCCACGCCCACCCCCTGAAGACTCGGCTGCTCGCAGCCAGTTGGTGCCGGCACTGTAAACGGAGCCACTGACAATGCCTCCCTGAGCCGAAACGAGGCGAGGAAAACAGATACCTTTGCTCACATCTCCGCAGCTCACGAAGA # Right flank : ACTACGGAAGTAGTCAGCCGCTGGAGGGGCAGGCGTCCCAGCGCCATGCGCTGCCCTCGCGCACCCATGGCTGTCCCTCCCGCTCGAACTGCGGGATGTTCCCCGCCCCGTAGCTCACGCGGGCGAGGTCGCCGGACAACTGGTCCACGTGCACGTCCGTCGCCGTCTGCGCCCCGTACTGCTGGTGCGCGGCCCTAGCCATCCCCACCCACGACTCTTTGGGCATCGTCGTCTTGCAGCGGGCGGACAGCGTGTCGTAGCCGGACGCGTCACCGCTGAAGAGGGCGCGGGTGTAGTTACGTACGCTCTCCTCCAGGTCGGCCTTCGCGGTGCCCTCGTCGGGCGCGGGCGTCTGGCCAGCGGTCGGGCTGCTCGCCGAGGTGGTGGCCGGCGCGGCGTCGTCACTGCTGTCGCCGGACGAGGAGCAACCGGTGAGCGCGACGGCCACGAGTAGCGCGCTGGCGGTGATGATGATGCGGTGGTTCACGGTCCCCCCACGG # Questionable array : NO Score: 4.94 # Score Detail : 1:0, 2:3, 3:0, 4:0.42, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCCGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCACCCGCGGGGGTAGTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-27] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 79347-82932 **** Predicted by CRISPRDetect 2.4 *** >NZ_RPSC01000014.1 Streptomyces sp. WAC06128 AA000298-14_WAC06128, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================================================================================================== ================== 79347 28 89.3 33 .............CC........T.... ACGTCAGGAGACATTCATGCCCGCGATCTTCCA 79408 28 100.0 33 ............................ CTTCTGCTGTCCGGGCCGGGGGGACACAATGTC 79469 28 100.0 33 ............................ CACCCAGCTCCGCGCCCAGGTCGCCCTCGGCGC 79530 28 100.0 33 ............................ GCGGGACGGCCGCCAGGACGCCGCCGCCAACGC 79591 28 100.0 33 ............................ CTGGACAGCCGGGCACTGGTCAACATCGAAAAG 79652 28 100.0 33 ............................ CGCGGCGGCCACGGCCATGGGCTCCGTGTCGAA 79713 28 92.9 33 .............C.A............ CCCGATCATGCCGCCCAGGCCCTGGCGGTTGAC 79774 27 75.0 33 A....-.T...A.CC........T.... CGGCGCCCGCGGCACGCTGTCGCTGCGGGTGGC 79834 28 96.4 33 .............C.............. CCTCTTCCGCGGAAGCCTCGCCACGGCGATGGC 79895 28 100.0 33 ............................ GGCGCTGGGGCAGATCGGCGCGGCGGCCGGGCC 79956 28 92.9 33 .............CC............. CGGCAGCGCGTCGCGGATCGGCACCGCGAGCAC 80017 28 92.9 33 .............TC............. GATCGAGGACAGGACCCCCGTCGATGCCTCCCC 80078 28 85.7 33 .............CC.....A..T.... CACGTCCTGAACCGTACTCAGCTTGATGTCCAG 80139 27 75.0 32 .....G..G..-.CCC.......T.... CCACGCTGGCGATCCCCGGGCCCGCTCGACAC A [80161] 80199 28 82.1 123 ..T........A.CC..A.......... GGCCGACGGCATCGTCGCTGAAGCCGAGCAGCTGTCGTCTCCGCACCGCGAAGTGCCTTGCGGGCCGAAAACGAGGTGAAGAAGAACGGCTACCCTTGCTCACATCTCCGCAGCTCATGAAGT 80350 28 92.9 33 .............C.........T.... GAGCACGGCTGCGATGGCCGTGCCGATGGGGAC 80411 28 92.9 33 .............C.........T.... GCACATCAACCAGTCCGCACGCATTGACTGGAC 80472 28 92.9 33 .............C.........T.... CCCCCTACAGAGGAAAGGGCACTGCCCATCATG 80533 28 92.9 33 .............C.........T.... TACGACTTTTACAGGATGGATGCGTTGCGCAGG 80594 28 92.9 33 .............C.........T.... GGACCTGCACGACTCGGAGTCCGAGGACGACCT 80655 28 92.9 33 .............C.........T.... CGACGCGCGGCGCGCTCCGCATCCAGAGCGCGC 80716 28 92.9 33 .............C.........T.... CAGGTACGTGTACGTGTGCCGGGCCATCAGTCC 80777 28 92.9 33 .............C.........T.... CGCCGGCTTCAGCTCCTTGGCCTTCTTCTTCAG 80838 28 92.9 33 .............C.........T.... CGCCTCCGCCGTGCTCGCCCAGCTCCAGCCGGA 80899 28 92.9 33 .............C.........T.... GGCCGGCATGGACTGCCCGCCGGCGGCCGGGGC 80960 28 92.9 33 .............C.........T.... TGTGGGGCACGGTGCCCCACAACGACGAACGGC 81021 28 85.7 33 ...........A.CC........T.... CCGACTACCGCCGCCCTCGGGCGGCATGGAGGC 81082 28 67.9 63 ...........A.CC..A..AA.GC..T GCGGGTCGAAACGAGGTGAAGGAAAACAGATACCCTTGCTCACATCTCCGCAGCTCACGAAGT 81173 28 100.0 33 ............................ CTGTACATGGATTGCTGCGCCATTTGGTGCGTT 81234 28 100.0 33 ............................ TTTCGGCATCGGCGCACGAGCGCAGGACAGAGC 81295 28 100.0 33 ............................ CCGGGACACCAGCTCGACCTCGACGCCCGGTTG 81356 28 100.0 33 ............................ CCCGTAGTGCACCCGGGCCCCGCCCCGGCCCTC 81417 28 100.0 33 ............................ CCGGATCGCGGCGGCCGTCGCCGCCCTCATCAA 81478 28 100.0 33 ............................ CGGTTAAAGACTTCTTCAGCCCGGAACCACAAA 81539 28 100.0 33 ............................ GCCGGAGCCTCCTCGTTGGCCAGGGGAGTGGGG 81600 28 96.4 33 .................A.......... CCCGGCAGTCGGCTGCGTGATCCTTGATGCCGC 81661 28 100.0 33 ............................ CGGCGTGACGGACGGCATCCGTTCCGTGGCGTC 81722 28 100.0 33 ............................ CGTCGCCATCCCCGCCGCCGCCACTCCCTGAGC 81783 28 100.0 33 ............................ GCACCCGGTGACCATCACCTACGTGAAGGCCGA 81844 28 96.4 33 ..............C............. CGTGATCGCCGCCGGGACCAGGGCAAGCACGAA 81905 28 92.9 33 .............CC............. CGCGGACGGGACGGTCGACATAGCCACGGCACG 81966 28 92.9 33 ...........AT............... ATGGCGGCAGATCGCGGATGAGATCGCGAGAAA 82027 28 92.9 33 ......T................T.... TCGCCCATGGGCGAGACGATCGTCCCGGAGAAG 82088 28 92.9 33 .............CC............. CAGACGGTCACCGGCGCCAGCAGCGCCGGATTC 82149 28 92.9 33 .............C............G. CCACCCCGGCACTGGCCCGCAGCCGTTCCTCCG 82210 28 92.9 30 .............C.........T.... GCAGGCCATGCTCACCTTCAAGATCGCCAC 82268 28 78.6 32 ACA....T.....A.........T.... CGTCGAGATGATCGAGTTCGAGGGCCTCGCCG T,G [82273,82291] 82331 28 82.1 33 .......A.....TC..T.....T.... GCGCTGCGCGGCGTCGAGCCGGCCGAGGTGTAT 82392 28 82.1 10 ..A.....T..A.CC............. CGGGTTCATC Deletion [82430] 82430 28 89.3 33 ...........A.CC............. GAGCCGGACCCGCTCCCGCACCGTCAGCGCCCG 82491 28 89.3 33 ...........A.CC............. CCGGTCTTACGGAGTCATCCACTCCCTCCTGAG 82552 27 85.7 33 .....T....-..CC............. ACCGTACGCATCGTCCGGCGGCGGCGCGAGCCG 82612 28 71.4 20 ...........A.CG.GA....G...CG ACGCCGACACTATCGGCGGT Deletion [82660] 82660 28 85.7 34 .C...........C.......A.T.... GGTGTTCGCGGCGCCCTTGGCCAGCTCCGCGGGT 82722 28 85.7 33 .............TC...A....T.... CTGCCACAGGGACAGGATGAGGCCGCACAGGGC 82783 28 89.3 33 A............C.........T.... CCGGACCTGGCAGCGCGTCGAGAAGGGCTTGGA 82844 28 78.6 33 A.........TA.CCC............ CTTGTCCCGGCCCGGGAAGGGGGGCATCGGCTT 82905 28 92.9 0 .............C.........T.... | ========== ====== ====== ====== ============================ =========================================================================================================================== ================== 58 28 91.7 34 GTCGTCCCCGCGCGTGCGGGGGTAGCTC # Left flank : CCCAGGTCGCCCAGGACATGCGACAGCACGAGCGCGTTGTAGTCGTCCTCCTTGAGCCCGTCGCAGGCCGCCGGCTTGCCCTTGTCGCCTTCGACGCGGTCCTTGAGTGCGGCCACGCAGTTGTCGGCGATCTCGTCGTACGACGGCTGGCTGAGCCAGATGACGAGGCCGGCGACTGCCCCGGCGACCGCTACGGCAGCGGCGGCGCGGACGGCGATGGTGCGGCGTGAAGCCGAAGTGCCTGAGCTGTGGAACGGCTGCTTCTTCGGCGTACCCGGCACCGGCTTGGGCTCCGTCTTCACTCAGCCGCCCTGCTGTGAGCTGTATGTCGTCTCGTGGCTGGCGAGTCGGGGGTCATCCTGCTTCGGGGTCAAAAGACCAGAGTGACGGGGATGACGACGATGACGGTGTCGTCTCCACACCCGCGGGGTGCCTTGCGGGGCCGAAACGAGGTGAGGGAAAACAGCTGCCCTTGCTCACATCTCCGCAGCTCATGAAGT # Right flank : CCAGTTGGCGGGCTGTGCTGCGGGGCTCGTAGCGGTCGCCCCGCACCCGCGGGGGCCCTTATGTGTTTGGTCAAGGTCTAAGGCCAGTAGGTTCGTGTGGTCGACGATCCGGCGGTCTGGGCACCGATTCATCGGATCGCCGGAACGCTCGACAAGGCACTTCCCGAGCTGTTCGCGCCTGACTATGACCAGCGGCTTGAGGCCGCTCGTCAGAGGCTGCGGCCGGAGGACTGATCGCGCGGTCTCACCTGACCGGAGCGGGTTGAGGTTCGTAAAAGGTTCCGTCGCGGAGCATCGCGAAGAGAACGTCAGCCCGGCGTCTGGCGAGGCAGAGCAGTGCCTGGGTGTGATGCTTGCCCTGAGGGATCTTCTTCCCACCGAGGTCCGTCGGGCGAAAGGGCAGCAGCGTGGATGAGCAGGCGTCAGGCAGGAGCTTTCTCACCAACCACGCTCGCGTGCTTCTGGCCATCGCGCGCGACACCGCCGCCCGCCTGCGCGAC # Questionable array : NO Score: 4.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:-0.20, 8:1, 9:0.35, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCGTGCGGGGGTAGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [34-62] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //