Array 1 6-562 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FRCY01000016.1 Cyclobacterium lianum strain CGMCC 1.6102, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	=============================	======================================	==================
         6	    29	 100.0	    36	.............................	CAAAGAAGCACTTACTGATTTGGTTGGGTTCCTTCA  	
        71	    29	 100.0	    37	.............................	CCCTCGTCCATCTCATCGGCGATCAGATCGATCGCCT 	
       137	    29	 100.0	    36	.............................	CTATATAAGGTAGCGAATGTCTCCCGGGCTATCTGA  	
       202	    29	 100.0	    38	.............................	CTCGGCTCCGGCATCACCATCACCAATGCCGCCGGCGG	
       269	    29	 100.0	    37	.............................	CATTCCTCCTGATACGTGATCCGAATAGCTATCCCTA 	
       335	    29	 100.0	    37	.............................	TATGCTGCATTGCAATGATGGCATAACAGACCCCTCA 	
       401	    29	 100.0	    38	.............................	TTTATCCCAAATTAAAGGTTCTCGGCTATCCACTTCAG	
       468	    29	 100.0	    37	.............................	TAAAAACCTTGTTTTGTGACCTCGCCAGGATTCAATA 	
       534	    29	  93.1	     0	...........................TG	|                                     	
==========	======	======	======	=============================	======================================	==================
         9	    29	  99.2	    37	CCCTTAATCGCACCATACAGGAATTGAAA	                                      	       

# Left flank :   TCTGGC
# Right flank :  GTACCTTTTTTGAATCATTGCTACATACTTTTCTACTTGCCGCAATATAGCCTCCCTAAAATTAAATAAATTCCTGGTATATTAATTTTTTTTTCAATCTGGGCAATCCAGACCTTTCATGAACTTCGTGAATCTGGTCTGATGTACCAAAAACCAATAGATCATGAAGGACAAAATCTCCGGCTTCATCCGGATTTGGGTACAGTGGTGGCGATCGATGGTGACCTCAAGCCCGACCATCCCTTTGTGAATGCTGCGCCTAATTTTTTAACGGCCCCGACCAATACCCTTGCAGACTTACTTCCCAAACCGTAGCTTTACACCATGCAAACCCGACCTTTTAGCTACCTGTTTTGCATCCAATACCTCGGACTGCGCTATCATGGCTGGCAGGTACAAAAGGGGGTAAAAACGGTGCAGGGCACTTTGGAAAGAAGCATCCGCTATGTATTGGGGCACGAAGATTTTAACGTACTTGGTGCCAGCCGTACCGATAGTGG

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCCTTAATCGCACCATACAGGAATTGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.62%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.20,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [3.3-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.27   Confidence: HIGH] 

# Array family : NA
//