Array 1 1884-25 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIEV01000020.1 Escherichia coli strain 91-I113-A entry20, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1883 29 100.0 32 ............................. ATCCCCCGGTTATTGACCCCAAAACTGGTGAG 1822 29 100.0 32 ............................. ACTCAGTCAGCGCGTTAACCCCTTCACACGAC 1761 29 100.0 32 ............................. GAACGGCGGCTATACGGATTCGACAGGTCAGC 1700 29 100.0 32 ............................. TAACCCGGATAACTGGCAGAGTGCGAATAAAC 1639 29 100.0 32 ............................. CGGCTTGTTTAATTGCGTGGAACGTCTCAATT 1578 29 96.6 32 ............................T AGATCGCGCCACGAGGAAACGAATATGAACGG 1517 29 100.0 32 ............................. GTCTGTGATGGCCTGCTCGTGAGTCCGCGGCG 1456 29 100.0 32 ............................. AATTTTTTATCCTCATAAACAGCCTCAGAAAA 1395 29 100.0 32 ............................. AGTTACGTCGCCATCGATATTAACGGAACACC 1334 29 100.0 32 ............................. CCGGAGATCATCATATTCTGATACGTTCCGGT 1273 29 100.0 32 ............................. CGTTATTTACTGCTTTTTCATCCGCTCTGCTG 1212 29 100.0 32 ............................. ACTCCGATAGCCTGCTCAGAATTAAGGCGCAG 1151 29 100.0 32 ............................. CCGCCGATTTCCCTGGCGTCAAAAGCGGTGAG 1090 29 100.0 32 ............................. CTCTTTCTCAGTCATCTGGCGCTCAACGCCGG 1029 29 100.0 32 ............................. GCAGCAATTGCCGGAGTTTTACTAATTGCCTC 968 29 100.0 32 ............................. TTTTGATTTCATTAACGGCGCTCCCCATATTT 907 29 100.0 32 ............................. TGCGCCGTAGCGTGTCCACCTATTGTAGTAAA 846 29 100.0 32 ............................. GCACCACGCGTACCCCGATGTTTGTTTTGCCA 785 29 100.0 32 ............................. ATCCGGCTATATCTTTGAGCATTACAGAAATA 724 29 100.0 32 ............................. CTATTGCTTTCGTACAGATTTTCAGTGGTGCT 663 29 100.0 32 ............................. AAAATTCTGTGTTTCGACCATTACTTCGGTAA 602 29 100.0 32 ............................. GGGGTAGAATTATTCTTCGTGAGCGATTTATC 541 29 100.0 32 ............................. CGGCGTTCCGTGCGGCAATTGGAATCACACCA 480 29 100.0 32 ............................. CGTTCTGAATCCGATATTCTTCAGCACCTTCA 419 29 100.0 32 ............................. AGCGTCAATCAGCGCGTCTATCGCGTCACTTT 358 29 100.0 32 ............................. ATGTAGGGGCAATCGAACGATTCTCTGCCGAC 297 29 100.0 32 ............................. CCGAGCCCGATTATCGGCATGAGCGATGCGGA 236 29 100.0 32 ............................. TCGAAGAAGAAAGGGAAATAATGCGAGGAACG 175 29 100.0 32 ............................. TATTACGCGCCAGCAATGCTGACAGCGGCAAA 114 29 100.0 32 ............................. CGCGAGAGCCAGCAAAACGCCAGGGCACAAAA 53 29 93.1 0 .A..........................A | ========== ====== ====== ====== ============================= ================================ ================== 31 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : ACGTGTTGTCACAGGCACTGGAGCGAGCCAACGAAATCAAGCATCCAGTGGGGCGCGTACGCGATATTGAAGCACTGGATGAACTATTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAACCGCCTCCCCGCTCACGCCAACGTTAAACGTTATC # Right flank : ACCATATAACCCGTTATCTCTTTCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [25.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 83638-83487 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIEV01000021.1 Escherichia coli strain 91-I113-A entry21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 83637 29 100.0 32 ............................. GCATATTTCATGCAGCGTTCTGAATGAGTAAG 83576 29 100.0 32 ............................. GCGTGGCGCGGGGCGTATTCCCCGGCGAGTAA 83515 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 100.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGCCGCAGGTGAAATTGAACCGCCACAACCTGCGCCGGATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAGTCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTATCCGTTCTTTAAAAATAAGGAAATGTTTTAATTTAGTTGGTAGATTGTTGATGCGGAATAAATTTGTTTAAAAACAGTTATGTATGCTTAGT # Right flank : GGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCCGGGAAGGCAGGTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //