Array 1 324936-323509 **** Predicted by CRISPRDetect 2.4 *** >NZ_VVIQ01000002.1 Prevotella sp. A2879 NODE_2_length_395234_cov_135.656701, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 324935 47 100.0 30 ............................................... GAGGCACTGATTGCCCATTATAGCGATGGT 324858 47 100.0 29 ............................................... TGCTCTTGGACGGTCTTTTAATGCGTTCT 324782 47 100.0 30 ............................................... AACAAGGAGCAACAGGAGCAAGCACAATCA 324705 47 100.0 30 ............................................... TATTTATGCCCCTTTCAACACCGCTCTTGG 324628 47 100.0 30 ............................................... AGATATTCAGAAACTTCTTGCAGACATCGC 324551 47 100.0 29 ............................................... GGGACGAGGGCTACAAGATGAGCAAAGAC 324475 47 100.0 30 ............................................... AGGTCTCTTTGTGTTACATAAAAGGCTTCT 324398 47 100.0 30 ............................................... ACGATAGAGTGTGGGTTAAATCTATTGCAG 324321 47 100.0 29 ............................................... CACCAGCTTGGAAACCATCATTAATTATC 324245 47 100.0 30 ............................................... CAAACCTGTATAAGGGGTTGCTCCCATCTG 324168 47 100.0 30 ............................................... CCTATTATTGGAAGGCTTTTCGAAGCTGTT 324091 47 100.0 30 ............................................... TCAACTTTAAGCGCAGGCAAATCATCGTAA 324014 47 100.0 29 ............................................... CTATAAGTCATTGCAAAGTTACTTTGATT 323938 47 100.0 29 ............................................... AAACTGCTAGCAATCTTTTTCAAACCGGT 323862 47 100.0 30 ............................................... AAAAGTTGTTTGGTGTATTCGTAGATGTAG 323785 47 100.0 29 ............................................... CTACAAAAGCATTAGAAAATTGTTCTCAT 323709 47 100.0 30 ............................................... AGCTTCACCATGATATCATTACCCCCAACG 323632 47 100.0 30 ............................................... CTCTCCGTACTGATCCCGTCCGGAGAATAG 323555 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 19 47 100.0 30 GTTGTATTTGATAATGCAAAGATACTAATTTTAAAGCTAATCACAAC # Left flank : TGTTTTAGTGGGGAACAAAGAAGAATGGTTTATCCTGAATTATAAAGTCAATTGGTGGAATTTTATAGATTTAGTCAATATAGGAGTATGTGGTTAATGGTATTTTTTGACTTACCCACAGATACAAAGAAGGAGAGAAAGGCTGCTGCACTTTTTCGTCAGAACTTGCTAAAAGACGGATTTACAATGTTTCAATTCTCTATTTACATACGCCATTGTGGTAGTAAGGAAAACATGGAGGTTCACATTAAAAGAGTCTCAACCATTATTCCAGAGTATGGAAAGGTGGGGATTATGGGTGTAACTGATAAGCAGTTTGAAGGGATTAAGCTCTTTTATGGTAAGAAACCACATAAGCCCAATGTACCAGGAGTACAGCTAGAGCTTTTCTAAAAAGATTAAAGTTCCACTTTTAAAAGTGAAACTTTAATCTTTCTTGCATTTTTCTTTTTCGTAAGTAGAGAGTATATTGCTTATAATCAATGTTTTATTCTACTTGT # Right flank : CTATGAGATGGTTTCCGTAGTTCTTTGCCGATTTATTTATACCCTCTCTGCTTATTTTAACGAATATATACACGTTTTGTAACTGATAATTGATGTGGTAATTCATTTTTATTGTAACTTTGTCTTGTGTTTAGGACATTGGAGAAGTTGAGTGCTTATTGGAGTAAGACTAAATAAGGAGACTCCCCCTAAGTTCAGCAAATTATAAGAGCCAATATGCCTTTATTGCTTTTAGATAACAGACAAGACAATGAGCAAGCAAGTATTTCAGACAGACTCCCGTCAGCGTTGGAGTTATTTTAAGTGGACCCTACGTGTAGTCCTTACGATTCTCTCACTCTTTGGAATCGTTTTCTTAGCAATGTTTGCCTTGGAGGGTAGCCCGCAGATGCCTTTCCATCACGACTATCGAAATGCGGTGTCAGCCTCATCTCCTTATACCAAGGACAACAAGACGGCAACACTCTATAAGTCGTTTCGTGACTTCTTCAAGGAGAAGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTATTTGATAATGCAAAGATACTAATTTTAAAGCTAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:74.47%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //