Array 1 87032-88538 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSRB01000001.1 Bacteroides uniformis strain TF09-22 TF09-22.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 87032 47 100.0 29 ............................................... ATATTATCTGGCACAGCTAATAGTAACTA 87108 47 100.0 30 ............................................... TAGGTGGGAATAATTCTTCTACACTCTTAT 87185 47 100.0 30 ............................................... TCTTCTGCTATTCAGAATTCACAGAATAGA 87262 47 100.0 30 ............................................... CGTCTTGAGCGAATGGGTCAAAAGAATAGC 87339 47 100.0 30 ............................................... GATATCCCCCAATCTGAATTCGGCGACTCT 87416 47 100.0 30 ............................................... AGCTCGGAGTGGGCGAAACATCCAAAACAA 87493 47 100.0 29 ............................................... CTGCGAAAACGGAGCATATGCTAATCAAT 87569 47 100.0 30 ............................................... GGAATACACTACAAAAGACTTTAGATAACG 87646 47 100.0 30 ............................................... CTTTTTCATCAGCAAAACCGATAACTGTAA 87723 47 100.0 30 ............................................... GTAAAGCATTCTCATTTGCTGCTGAAGAGA 87800 47 100.0 30 ............................................... CCTTTTCATCAGCAAAACCAATAACTGTGA 87877 47 100.0 30 ............................................... TTATTTCATTAATTTTGTTTTGTAGAATAC 87954 47 100.0 30 ............................................... GTTTTACCCCCTTTTTACTGTGTAATCTGT 88031 47 100.0 29 ............................................... TGATGTATGGTTTGACTATGAACTGATTT 88107 47 100.0 30 ............................................... ATTCACCTTTAACTACGAACGTCAGTTCAA 88184 47 100.0 30 ............................................... TTGGGACTTCCGGGCTATCCTTCGGAATCA 88261 47 100.0 30 ............................................... GCAGCGTCCCTGCTTTCCAAATCATCGATA 88338 47 100.0 30 ............................................... TTGCCAGAGGCGTTCACCGACTACTTTTCT 88415 47 100.0 30 ............................................... AGGAGAAGTATTCAAAACCTCGTTTATCCG 88492 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 20 47 100.0 30 GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Left flank : TGTTCTGTATGGCAGGGCCTGCTTTCCATATTTCGTCCAGAAACACGACATCGGCTGTGGGCAGATAGCCGTCGATGGCACGTTCATACTTGTCGGATTCTTTCAGTCGGCTAATGCTGACAGGACCGAAAATCTCGTCGGGCGTAGAGAAGCGGGACATCAGGTATTCAAAGGCACGGGCATCTGTAAAAGCCGACTTTAGCCGCCTGGCTACCATTGACTTGGCTACTCCCGGAGGTCCCAGGAGCAGGATGCTCTCGCCTGCCAGGGCTGCCAGCAGGGAGAGGTTTATTTCGGTTTCTTTTTCGTATACTCCCCGGTTCATTTCGGAAAGGAGGAGGCGGATGCGTTGGATCATTTCCACAATATGATTTATTTATAGTCAGTACTCATGTATAAAGAAAAGTGTGTAAAGATACCAAATAGTAGCGAAATCAGAGAGATTCTTATTAAGATTCACTATCTTTGGAAAACAAATACACACAGACACGCACACACAC # Right flank : CTGATTACAAGTAACAATCTAATATTCAAACGATTACACATAGTGTTAGAATATAAAAAAAGAATGCTGCTTCTAAAAAAATCCCGCCATTGCGCGGGATTTTTTTAGAATAATTCTAATTGTTGTCCAGGCGTATTCACATCCACAGTCTTTTTCCCATAAAAAAGTGCTATATTTCCAAATTGCTTGTCCGTAATGCACATAATTCCGACACTTCCATAGTCCGGTAAGAAAGATTTAACTCTTTTTATATGTACCTCCGCATTCTCACAACTCGCACAATGACGAACATATATAGAGAACTGGAACATCGTAAATCCATCCTTTTGCAGATTTTTTCTAAATTCCGCATACGCCTTTTTATCCTTCTTGGTTTCGGTAGGCAAATCAAACAACACTAATACCCACATAATGCGATATTCACTAAACCGGTCCATCACATCTCTGGATAGGATATTTTACGCAACTCACCACTGAAACATTTATACAGAGAAGCCGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTGGAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.30,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [65.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //