Array 1 363054-367668 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066007.1 Corynebacterium glucuronolyticum strain FDAARGOS_1053 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================== ================== 363054 28 100.0 33 ............................ CCGTGCGATGGTACCACCCCAAGATCCACCTAG 363115 28 100.0 33 ............................ TCCACTGGAACTCCCCATCCTCCGACGGTTCCG 363176 28 100.0 33 ............................ CGTAGTAACTACGTTGTAATATTACTCATGTAA 363237 28 100.0 33 ............................ CCGTGCGATGGTACCACCCCAAGATCCACCTAG 363298 28 100.0 33 ............................ CCGGCAGGACCCCATGACTGAGCGCCCCGATGT 363359 28 100.0 34 ............................ GATGTCGCCCTCGTTGAGAACGTCGACGGCCTTA 363421 28 100.0 33 ............................ CACGCGTCACGCAACGCGTCCAACTCCGCGTCG 363482 28 100.0 33 ............................ CAGCCCGACCCACCGGCCACATTCCGTCACAGT 363543 28 100.0 33 ............................ CCGAACGATCACGAAACGATGTATGACTTCCTC 363604 28 100.0 33 ............................ CGGCGCGGCGTCACCGGTGGACTTGTCGCGGTC 363665 28 100.0 33 ............................ CTATACCAGTGTGCTCTTGGAAGCGGCGACAGA 363726 28 100.0 33 ............................ GGACCCGCCGAATGATCCACCTCGTTGTCGGCC 363787 28 100.0 33 ............................ CCTGCAGCCCCTCCCGCGTGCGTGCGGAGATAA 363848 28 100.0 33 ............................ CCGCCTTGCAGATGTCTGCTTTGTATGGGGAGG 363909 28 100.0 33 ............................ CCCCGGCTCGTGGTGTGGGAAAACGTGAGAGGA 363970 28 100.0 33 ............................ CCTGGTTCGACCAGCCTGGCGACAACTGCTGGA 364031 28 100.0 33 ............................ CATCGGCCACAGTCCCAACACGAAGCCCCGCAA 364092 28 100.0 33 ............................ CACAACCGCCAGCACACCGCCGAAAATGTTCAC 364153 28 100.0 43 ............................ CGCCTCGGCAAGCTCCCGCTGCGTGTACTTCCCCGTCTGCCAA 364224 28 100.0 33 ............................ GTGTGTGTGCTCTCGCACGTAGTTCGGGTCGAG 364285 28 100.0 33 ............................ CTCTACGTCGCTTTGTGCAGCCTGTAGCTTCTC 364346 28 100.0 33 ............................ TTCCTGCCCATGTTCCAGGCATGAATTGTGCCC 364407 28 100.0 33 ............................ CTCCCGCACCCGGTCAAAACGCCGGCCACCGCT 364468 28 100.0 33 ............................ CGCGGCAACGCCTGTCATTGTCGTACCGAGCGC 364529 28 100.0 33 ............................ CGTCTCGTCCTTCGCCCTACAGCGCGCCACAGC 364590 28 100.0 33 ............................ GTCGCCGACGCGACCCACCCACCGAGTTTTGAA 364651 28 100.0 33 ............................ GAGATATGGGGGCTAATCAGATGAAAGAAGAGA 364712 28 100.0 33 ............................ CACGAGCAATTGCTTCATCCGCCCTGCCTGAGA 364773 28 100.0 33 ............................ CTGGTGCAGGCTGAGAAGCTGCTGGACGAGTCG 364834 28 100.0 33 ............................ TCCCGGACACGCGGCTCAATGAAAAAACGGTGC 364895 28 100.0 33 ............................ GGCTATGTGGAGCAGGCTGAGGCTGCTGTGGCT 364956 28 100.0 33 ............................ CCTTCCACCACCGGGCAGTAGCCCACCAAACCG 365017 28 100.0 33 ............................ CAAACCGCGATTTAGGAGTCGGTGTGATCGCGC 365078 28 100.0 33 ............................ CTTACCAGATAAATTCGCAATCTGGCAGCTATC 365139 28 100.0 33 ............................ CGCGGGCTACTCCAATTTTGAGGCGGTAGTGGA 365200 28 100.0 33 ............................ CTCTCCGCACACACGAAAGGGAAAACCATTATG 365261 28 100.0 33 ............................ GTCCCACTTTTGCCCTTCGGGGCATCGGGGTCG 365322 28 100.0 33 ............................ CCGCATCAACATGTATTTCGAGTACAACCGCCC 365383 28 100.0 33 ............................ GGAACCGTGACCCGCGCAGGAGCCGCATCAGGT 365444 28 96.4 33 .........C.................. CAGGTGGGACGAGATTGACTCGATCGTCGCGCA 365505 28 100.0 34 ............................ CAGGATGATTCTCGGCTGGAAAAGGTGGCGTGGG 365567 28 100.0 33 ............................ CTTCCTTTCGAGAATGCCGCGTTTATCGAATTC 365628 28 100.0 33 ............................ CGTCGGGCACGAGACACAAAAGTAGCAAGCGAC 365689 28 100.0 33 ............................ GATAGCGATAGCCCTCGCCCGCGTGGACTGATC 365750 28 100.0 33 ............................ GACAATGAGGTACAGGTCCTCCCAGCTTGACCA 365811 28 100.0 33 ............................ CAAAATCGGGCCTTTTCAGCCAAGGCCAACAAA 365872 28 100.0 33 ............................ GACAATGAGGTACAGGTCCTCCCAGCTTGACCA 365933 28 100.0 33 ............................ CAGCGAGCCAACTTTTCATGCGGCAAGCGAGCG 365994 28 96.4 33 .................T.......... TTCGTGGCTTTTTAGGGCTCGGCGGTGATAAGG 366055 28 100.0 33 ............................ TCTTGCCCCCACAATGCGCGCACGTATCCGGGG 366116 28 100.0 33 ............................ CGCCGGGATTTCCGCCGGCGTGTTCAAAGTCCC 366177 28 100.0 33 ............................ GAAAAGGGGTACGGCTATGGCCGACACGAAACA 366238 28 100.0 33 ............................ GTGCATATTCAGCATGACACACGTTGTGTACCC 366299 28 100.0 33 ............................ CCGTAGTTTTGTGGTTACGTGGTGCTCCCTGGT 366360 28 100.0 33 ............................ CTTTTGTTGCAGCCATTTAACGGATTGGTGTAT 366421 28 100.0 33 ............................ CGCCCGCGTAGGCCCTGACGCGCTATAGACTGA 366482 28 100.0 33 ............................ CAGCAAGGCGCACGCAAGGGCGGCGGCAAGCAG 366543 28 100.0 33 ............................ GACCAGACCTTCGATGATGTGGCGCGCCTGCTG 366604 28 100.0 33 ............................ GTTCTGACCGGCTGCGTTTTGGCCAAGCTGCTT 366665 28 100.0 33 ............................ GCCGTGACCACCCCGTACCAATCCGGGGTGCCC 366726 28 100.0 33 ............................ GACCAGACCTTCGATGATGTGGCGCGCCTGCTG 366787 28 100.0 33 ............................ GTTCTGACCGGCTGCGTTTTGGCCAAGCTGCTT 366848 28 100.0 33 ............................ GCACTCAAACTCGCCACCGGCGTAAACATCCAA 366909 28 100.0 33 ............................ CGCTACAGGGTGGGTGTGCACCATCCCTTTCTC 366970 28 100.0 33 ............................ TACTGCCACGAAGATCGCGGCCGGGGTGACGAC 367031 28 100.0 33 ............................ CGCTACAGGGTGGGTGTGCACCATCCCTTTCTC 367092 28 100.0 33 ............................ CCGCGAAACCGGCAACATCGTTGCCCAGGTGGC 367153 28 96.4 33 ....A....................... CAGTTTCACCGTCGGTGGCCTGCTGTACAGCGC 367214 28 100.0 33 ............................ CAGGAATTGGTGCCGTGGATGCGGGTGGCAGGG 367275 28 100.0 33 ............................ CGTTCGTAGGGGCCTTGGCCTTTAATTTACGAA 367336 28 96.4 33 ............A............... ACCATCACCCGCATCTTCCCCTCTGTGCTCCTT 367397 28 100.0 33 ............................ CGGCGAGAGCACCCGACCATCGGCCAGGTGCTC 367458 28 92.9 33 ..T.........A............... GCCAGCCACCTTGCTCGAAGCCACAGAATCAAC 367519 28 96.4 33 ............A............... TGAGGCTGTCGCACCGGGTGGTACAGGCTCCGA 367580 28 100.0 33 ............................ CTGCGTTACCGTTGAACTGACTTTCATGCTTCA 367641 28 96.4 0 ...........................A | ========== ====== ====== ====== ============================ =========================================== ================== 76 28 99.6 33 ATCTGCCCCGCACCTGCGGGGATGAGCC # Left flank : CGTCCTCGTCACCACACCACTGCCCTACAACGAGTTCTGCGCCCTCATGAACCGCGCCAAACTCGTCGTCACCGACTCCGGCGGCGTGCAGGAGGAGGCCCCAGCACTGGGCAAACCAGTCCTCGTCATGCGCGACACGACCGAGCGCCCCGAGGCCGTCAGCTACGGCACCGTCAAGCTCGTCGGCACCAACGAAGACGACATCGTCAACGAGGCGACGACGCTGCTCACCGATGACACCGCCTACGCCGCCATGGCCAATGCCGTCAACCCCTACGGCGATGGCGACGCCGTCCCCCGCGTCCTCGCCGCCATGGCGCAGCTCGCCGGCGTGGGAGAGAGGTTGGAGGATTTTCGGCCGTAGGGGTGGGCCACCGGGTGGGGCGGTGCCCCAGCTCCGACCCCTCCCACGCTCAAGCCGACTCCGGCCTCCTCTTGCCCCCGATTTCAAGTTAAAGGTAAAATAGCCCCAGGCTCCATATCCTGCCTGTTCAGGAAGC # Right flank : ACACATTGCTATCTAGCTCCACTCCCCTCGCCATAAACTGGCCTGAATCAGCTTCGATTCGACCGGCCAGGGGCTTAGTGTTAGGTGTTTCCGGTTTATCACCTCAATATGTCCTGGGACTCAGAATTATCTAGTTCGGTTAGCTCGGTGGCAAAGAAAAGTCGGCAATTTTCGAAATTCTCATTAACCGTGTGCACTCGCATTTTATGATGAGAATTATGTCAAGGTTTAGCTCGGCATCCGAGAAAGTGCTCGCCAGTTTTGAGCCACAAATCCGTTCATTTTGGGCTAAGACTCCGGAAGACTCCACGGATAAGAGTGGGGATTTCTTGTCGGTACCCCAGCATCTTGTCGATGCCGCGTGCGTCGCCGATGAGCTTTGGGAGACGTGGCTAAGTAATCAAACAAGAGCGTTTCTTCGTCGGGAGACTTCAATGACTGAGCAGGCGCTGCGTAGCCTGGTCACTTTTGTCGTCGGGACGCATGACATCGGGAAAATA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTGCCCCGCACCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 373913-375342 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066007.1 Corynebacterium glucuronolyticum strain FDAARGOS_1053 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 373913 28 100.0 33 ............................ GCCTGGCTCGTGGGATAAAAATGATGGGTTTTA 373974 28 100.0 33 ............................ TGTCTTTCGCCTTCAACTACATCGACACTCGCA 374035 28 100.0 33 ............................ CCATCCCATCCGCCCCGCCGGGGCATTATTTTA 374096 28 100.0 33 ............................ GTCCGGAGTAGCCGGCGTCTCCGTCGACAGAAC 374157 28 100.0 34 ............................ CATCACAGGCTGGGGTCAGAGTAGAACCTATTTG 374219 28 100.0 33 ............................ CCTCGTCGTAGAGGCACAGGTCGAGCACGGAAC 374280 28 100.0 33 ............................ CCGCATGACCTGCCGGGTCTACGAGTTTTTGGT 374341 28 100.0 33 ............................ CCGGCTCCGCCGGCCCCCGTGGAGCCTCACGCA 374402 28 100.0 33 ............................ TGATCCTGAGTTGCGCTACACCCCATCAGGTTC 374463 28 100.0 33 ............................ TTCCATTAACACTAAAAGTGCATATAGTGTGTC 374524 28 100.0 33 ............................ GCGATCCGCCCATTTTTGGACTGGGTGGGGCAG 374585 28 100.0 33 ............................ CCCCAGGTGGCCACCATTCAGGCCGCTATCGAC 374646 28 100.0 33 ............................ CTTTTCCACATGAATATCCGGGTCCGTGCCGGC 374707 28 100.0 33 ............................ GAACTTTCCTAATCGCCGTGCGGGCGATAGCAA 374768 28 100.0 31 ............................ CCCGCCGCGCGCCTCTCTCTAGGCGTCCCTT 374827 28 100.0 33 ............................ CAAGGGCATCTTCGCGTCCCTGACAGGCGTGCA 374888 28 100.0 33 ............................ TTTCACCTGTTTCCTTTTCCTTCTCAGCGACCA 374949 28 100.0 33 ............................ CCAACGATCACGCCGCCTGAAACACACCAAAAC 375010 28 100.0 33 ............................ CTGCTAGTTTTCCTGGGGTTTCGCACACCTGCG 375071 28 100.0 33 ............................ CAAGCAGGTCAGAGCGTTAAAACGGCAAAACCC 375132 28 100.0 33 ............................ CCTCAGGTGCTGCTTGCTGCCCGGTTAACCAGT 375193 28 100.0 33 ............................ GCAACCATCCCGGCCACCCCATTCAACGCCTGC 375254 28 96.4 33 ........................T... TTTTATATGGCGTGGCGTAGTTTCTACCTCTTA 375315 28 85.7 0 .......................A.CTT | ========== ====== ====== ====== ============================ ================================== ================== 24 28 99.3 33 ATCTGCCCCGCACCTGCGGGGATGAGCC # Left flank : GACGATGGCGATCCTCTCAATGCCGAACTATTCCTTTGGAACGAAATCTCTGCCATCCCTGCGGGAATGAATTGGTCGGAGGAACATCGATGATGGTCCTCGTCGTCACCGCCTGCCCTGCCGGTCTTCGCGGTGACCTGACTAAATGGTTGTTCCAGATTTCCCCAACCGTTTTTGTTGGGCGACCCAGTGCTCGGATCCGGGAGGCAATCTGGAAACGCACGGTGGAACTGTGCAAAGACGGATCTGCCATTTTGGTCTGGAGCTCCGATAACGAACAAGGTTTAGAGTTTCGTACCCATCGGACCGAATGGCAACCCGCCGACTACGACGGCCTCACTCTCATACGCCGCCCCGCGCGACGGCCTCCCCCACAGCGGCGCACCGGCTGGAGCAAAGCCCGCAACATGTACCGCTCCCGCAAACGGTAGCCGAAACTAGCAAAAACAAAGCTAAAGCCAAAACCCAAAATCGGCGCTCATCTCCCCTGCTCAGATAGC # Right flank : TGTAGTAAACTTCGCGCCACGGTGACCAATGAAGGCAGTCCAGCATTTTGTTTGCATTTGTGCCGATTCTGCCATCGGCTATCACTACTCCACTACTATGAGCGATATGACCACTCCTGATAGCGCAACTCCTGCCCGCCTTACGTACTCCGAAGATGCTCGCACAACGCTGGCCATAGCTGACGGTCGTGCGCACCTGCTCTCTGCGGATTCGCATCTCGGGGAGCTCCTCTATCTGTCCCCCGAGGCCGATTTTTCTGAGGGGGGCTCGATTCGCGGCGGGGTGCCGATCATCGCGCCGTGGTTCAATGATCTGACAGGCCAGGATCCTGCGCATGGGTGGGCGCGTCGGAAAGCGTGGGAGTGCCAGGAGGTGCCGGGAGGATTCGATTGCCGGATTCGGCACGACGAGTGGGATCTGAGGCTCGGCATTCAGACCACGCCCAAGGGCTTTGCGATAATCTTGAAGTGCAGGAATGCAGCTTCGCGCCGTCGCGATG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTGCCCCGCACCTGCGGGGATGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTGCCCCGCGCGAGCGGGGATGAGCC with 89% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 442118-441908 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066007.1 Corynebacterium glucuronolyticum strain FDAARGOS_1053 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 442117 28 100.0 33 ............................ TGGAGCAGCGCCTTGCAAAAATGCTCCGCCACC 442056 28 100.0 33 ............................ CTGACTCGCAAAGTCCTTGCCCAGGACATGGAT 441995 28 100.0 33 ............................ CCTTTGGTATAGGACATCAAGTCCAGACCAGCC 441934 27 82.1 0 G..........-...........G.G.G | ========== ====== ====== ====== ============================ ================================= ================== 4 28 95.5 33 CTGCCGCCCCTGTGCGGGCGGATAAACC # Left flank : ATGATCAAAGAGGATGCCCCAAGTCCATGCACGATGCCCCGAAGCGCATCGCCGGCGAGCAGTACTTCCACCGCATCGCCGGTGACACCACCGTTAATGTTGTGGACAATATTTTCGGCCTCCGCGCCGTCATCACCAAGGTCGACCGCGTCACCAACGAGCCGACCGGCATTGACTGACTCAAGTGCGAGGCCGACTGCCGCTTCCGCCTTACCATCGGCCTCCCCGCCACCGATGATGCCCGCCCCGACTCAATTGTCGACGGCTCCCTCTACATGGCGGACTCCACCGGCTCCTGGTACAAGCGATCGCGGTTCAGCGTAATGTAAGAGAAAATTTGTGGGGAGCTAGGCGCGATCTGATCTTAACCTCGAGTTTTTGCCTTCTTTCTTTTAAAACTGTCGGTCGGCGTTTTCCGGTGAATCCTTAGCGATGCTGGATCTGAAGCGAGGAACGTGGTAGAATTACGCACATAATTCAATATGGGCAAGTGAAGAAGT # Right flank : TTAGCTCGCAGAAGCACTTTCATCCTGGGGAGCATTCCCTCCCTGGTGGGGGGCTTCGGCCCTATAGCTTCATCGGAGCTGTAGGGTCTTTTTTGCGGTGGAATCTGCAGCATAAGGTCGACATGTGTCTTAACTGCCTTCTGAAGAAAGATCTTTTGGCCACGTTGTTGAGTAATCCACCCTAGGTATGGCGTTTTCCCACTGGGTATACCGCGTGCTCAGGGTCGTACCAGAGGATCCGGAAAAGGTCTCCAGAACGGAAGCCCCAAAGCCGACATTTGCCTTTGAGTCGGAACCTGAACACACGGTCCTCACTATCCGGGATTTTTTCTAGGCGTTTTTGTGCCTGGCGGCTGAGGTCAGCAATGTCGTGGTAGTGATTTCTCCGGTGTCCACCAGCAGTCTCTTGTTCGCACTCGCGCCATGTTTTCTTCTCCAAAGCCTCAAGGAACCGCAGGAGCTCGATGAGCTCATCTGCATTGAGGTTCCACCGACGCCCG # Questionable array : NO Score: 2.64 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCCGCCCCTGTGCGGGCGGATAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.10,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //