Array 1 1267945-1265211 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP076545.1 Collinsella sp. zg1085 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1267944 36 100.0 30 .................................... TGATTTGTTCAGTCGTGCGTTTCAAGGACG 1267878 36 100.0 29 .................................... TTCAAGGCTTGTGTGCTCATTAAAGGCAC 1267813 36 100.0 30 .................................... CCAACGCTCATGAGCACAAAAAAGTATCTC 1267747 36 100.0 30 .................................... TGTTTGGGTGCATGAGGCAACAGAAACACG 1267681 36 100.0 30 .................................... TGCGCGCTTAAAACTTCTCACTCGATGACG 1267615 36 100.0 29 .................................... TTCGTTTTCATTGCTTTTGCTTTCTGTTG 1267550 36 100.0 30 .................................... GAAAAGTTGCCGCGTGTGCTACGATTCCGC 1267484 36 100.0 30 .................................... GAAAAGTTGCCGCGTGTGCTACGATTCCGC 1267418 36 100.0 29 .................................... TAATTGCTTTAGTAATTGCAGCCATTAGA 1267353 36 100.0 30 .................................... AATATATCCTCAATATCGAGTCCGTGAAAA 1267287 36 100.0 30 .................................... ACGTACCGCCCGCAATTCTCAGCGCTTGCA 1267221 36 100.0 30 .................................... CGCGCGGGTGGGGCTGCTCCCTCAGATGAA 1267155 36 100.0 30 .................................... GCAAATTCATCGCTTGCACTTCCAAAATAA 1267089 36 100.0 31 .................................... TCTGTTCAGTGTTGACTTTGCTGAGCTTGCA 1267022 36 100.0 30 .................................... GTTTTAAGACCTGCAACAATCTCAGCACGA 1266956 36 100.0 29 .................................... TACGTTCGTCTCAGCTTCGCTCGCATGTG 1266891 36 100.0 30 .................................... CGCGCAACTCCTCTAAGCTCACGTTGTCTT 1266825 36 100.0 29 .................................... CTCTCACCCCCTTACACATTTATGTGTTA 1266760 36 100.0 30 .................................... CACACAAGAATGCGTACCCCTTGCCCCTGA 1266694 36 100.0 30 .................................... AATGGTTGGAAGTGCCGCCGCGAGTTGTGC 1266628 36 100.0 31 .................................... CCGCGCGGGTGGGGCTGCTCCCTCAATGAAT 1266561 36 100.0 29 .................................... TGACCCCAGTAGCCACTCCAGTTATATTT 1266496 36 100.0 30 .................................... TACGGGAGCGGTAGGCATTATGGCGCTTGA 1266430 36 100.0 30 .................................... TTGTTCATCAGCAGCGCGTTGACCTTCTGC 1266364 36 100.0 30 .................................... ATCAAGGGATAAATCAAGCATTTCGTATTC 1266298 36 100.0 30 .................................... TACCGAGGCTGACCAGTCTCTAATCACCCG 1266232 36 100.0 30 .................................... TGCTCAGTTATCTATTGTCACCACCATTCA 1266166 36 100.0 30 .................................... CCCCAACAAGTCCGGCTTTTCGCATCTGAG 1266100 36 100.0 29 .................................... CATCGAAATATAGATGACCAGTTGGCAAG 1266035 36 100.0 30 .................................... CATTGGGAGGGAGATTTAGTCGTGGGTACG 1265969 36 100.0 29 .................................... GCTCAAACGTGGACATACGGGCAAGTAGG 1265904 36 100.0 30 .................................... TATTGCTTGCAACAATGTGTGCCGGACGTA 1265838 36 100.0 30 .................................... TACCGAGGCTGACCAGTCTCTAATCACCCG 1265772 36 100.0 30 .................................... CCCCAACAAGTCCGGCTTTTCGCATCTGAG 1265706 36 100.0 29 .................................... TCTTTTTCTACGGGAAATATAATCCTCTA 1265641 36 100.0 30 .................................... CGGTAGGAGCCATCACGCACAACAAAACAA 1265575 36 100.0 30 .................................... TGTTTTCTCTGCTGAACGAACTATCTCTTT 1265509 36 100.0 30 .................................... TGTTAAAGACTTACCAGCTCGTGAGATTGG 1265443 36 100.0 30 .................................... TGACCGTATTGCCTTGCTCAAGCTCAATAT 1265377 36 100.0 29 .................................... TGCAGGTAAGAGACAGAGCCAGCGTATGG 1265312 36 100.0 30 .................................... CAACAAAGCCATCATAGTCGTTAAATAGCT 1265246 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 42 36 100.0 30 GTTTTGGAGCAGTGACATCCTGACTGGTAGTCAAAC # Left flank : TCTTGATGGGCAGATATTTTCTACATTTGAAGGTTTAGTTTTTGAAGATGAAGAGACGAGACAAAGCATCGAGCAATCTATAAAAGATATTCAACAACAAATTGCAATTCGGAGCTTTCAGCTTACGGGCTCTTATCATTTTGCATTAGAATGGGACGTGATTAAGTTTCTTAAAACTTATTCGTATTCCGTGGATCAGATGACGGAAAATTCGTACCTTGACAGTTTGATATCGTTTCTTGATTTTGCACATGATATGAGGTTTAACGGGGTGCTTGTGTTTATTGGTCTTAAGAATTTTTTGAGTGCTGATGAACTCAAAAGTGTCTATGAGCGCATCTTTTTTCACCAGTTTTATGTTCTCTTGCTGGAACGTGAGCATGACGAAAGAAAATTTGCACCCGAGGTTAAAACTCATGTTAACCTGCAATTATTAGAAGAATAATGCTCTGTATGGTCAGGATGTTCGTCTCCTTGCAGTAGGAGAATTTGCTTCAATG # Right flank : TTTGATAAAGACCCACATTCGAGCTTATGTCCAGACGAAGTGTTATATTTGCTCAAACCAGCAGAGGTGGGGAAAAATTAGAAAGGTTTGTCCCATGAAAAAGAATCAGAACACCTGCGCACACACCAACAATACCTACACGCTCACAAGGCGCAATGCGTGCTTTTTGGTAGCAGTAGCAGGACTTGGTTTAGCTGGTTGCACACCAAAGAAAAAGAACATAGACGCAGGTAGTGCTGGGAGCTCCACAAAGCCATCGGCAAGCTCAAAAGCAAGTGCCACCCAAACTGTCGGCATACTGGTTCGAGCTGAGGGCTGGGGCGTGGGCGACCCAGTGTTTCTCTTTGGCATTTCAAGCCAAGAGAAAGAAGTAGCTGAGCTGAAAGTCACTCCAAACAAGTTGGTAGGGACAGAGCTTACAGAAGGTGAGTACACTATCACGGTAAAAGGTGATATGCCACTTTCTCAGGATAAGAAAACCACCTGGATGCTTCCAGAAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGGAGCAGTGACATCCTGACTGGTAGTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.50,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //