Array 1 417125-414258 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOOU010000003.1 Blautia sp. NSJ-34 HP-D35-62_ctg003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 417124 33 100.0 35 ................................. TGTCTGGCTGTCAGAATAGTGATACAGCACTGCAT 417056 33 100.0 36 ................................. ATTCCAGATGTGGGTGGTACTGTCGTAGGTGTGGAG 416987 33 100.0 36 ................................. GTTTTATTTTGTAGTAATAAAATAGGACGCAGCTTT 416918 33 100.0 34 ................................. TTGTACTTCTCCTTGATTGTTGCAATAGCTGTTG 416851 33 100.0 34 ................................. CGGCATCATATGTGGCATATGACTGTCTGTATAA 416784 33 100.0 33 ................................. CGGTACCGGACAAGCTCAAAGAAGTGTTATTGC 416718 33 100.0 34 ................................. TATACCCATAAGGTGCAACACTTGAAATAAATTT 416651 33 100.0 34 ................................. CTATCAGGTAGACCGTGTGATTGCCAACATGGGA 416584 33 100.0 36 ................................. GATGGATACGGCAAGAGCGTTCCTGAACACTATCCT 416515 33 100.0 34 ................................. AGCAGAAAGCGCTGTTGAGTAGATACGAAAATCA 416448 33 100.0 32 ................................. TTATTTGATAATACTCTGTATACGCAATCTTT 416383 33 100.0 35 ................................. AGCGTAACGGAACCGTCAGAGTTTTGAGTGATTTC 416315 33 100.0 35 ................................. CCTTGATATAACCACCCTGCTCCTGTCCGGCGGTT 416247 33 100.0 35 ................................. ATATTTACAAGTCCCCTTTTTAGTCACCTCGTATA 416179 33 100.0 35 ................................. ACTGCCAGCAGTAAAGCAGACTATCCCCCTGAGGT 416111 33 100.0 34 ................................. GGAAGAGGAGCTTCCGGATATCGTACAAAGGTGG 416044 33 100.0 33 ................................. TTATCGGCATATAGTATGGAGGCAGTATGAGAA 415978 33 100.0 33 ................................. TGAATTAGTGCATTAAGTAGCGGGGCAACCACA 415912 33 100.0 34 ................................. TCTGCTTTTTGGAAAACATTGAACGCATCCTGTA 415845 33 100.0 33 ................................. ATGGGTACTTTGATACGCTTACTTGTAACAGGG 415779 33 100.0 35 ................................. CTGTCTCAAATCCCGTTTGTGGAGGACCCAGACGA 415711 33 100.0 35 ................................. CGATAAAAGCATTGATTGCGATAGTCTCGTCGCTA 415643 33 100.0 36 ................................. TTCCATGACTGTCCGTGTCTTACCTGCCCCCGTCTC 415574 33 100.0 35 ................................. ATATTCAACCAGCGAGCGGATTTGGCGGTCTATCA 415506 33 100.0 34 ................................. TCTTTGCTTCTTCACTGCTTAGATGTCTTATCGG 415439 33 100.0 35 ................................. CGGATGGTAATATAGACGCCTGGCATAAGGTTGTG 415371 33 100.0 35 ................................. TACGATCATCAACATTTTTATCTGTAGACCGCTTA 415303 33 100.0 36 ................................. GGTGCATAAATCTTTGCCATTATCTGCGCCTCCTTG 415234 33 100.0 34 ................................. TAACTTGCCCATGTCATAGTTACGTGGCAAAAAG 415167 33 100.0 33 ................................. TGCAACTCCACAAGGCTATACATGTAATCACCC 415101 33 100.0 34 ................................. TTTTTGGGTAAATCATAGTTAATACACGTTTTAT 415034 33 100.0 33 ................................. GTATAGTTCTCCAGGTCAATGTCAACAATTGAG 414968 33 100.0 35 ................................. AATAGTCAAAAAGAAACAAAGTGGTTATCTCGATT 414900 33 100.0 35 ................................. ATCGAATGCTTCTTCTGTGGCACCGGCGCTACCCT 414832 33 100.0 34 ................................. GTCATAAATCATTATATAAGGGCTGTATCCCAAA 414765 33 100.0 35 ................................. TCCAAACGGACTCGCGGACTTGTGGGCACAGGTGT 414697 33 100.0 36 ................................. AAAAGACGGTAATGGACGTTATGAGAAGACCATAAA 414628 33 100.0 34 ................................. TCCGCCTGATGACAGATTTACCAAATCAGAGTTG 414561 33 100.0 36 ................................. GTCTATGCCATCTGGCATTGTCATAAATCCGTCTGC 414492 33 100.0 34 ................................. AGAGCATCTAATCGTGCTTTTATATCCACAGTAT 414425 33 100.0 35 ................................. GTGTAACCGGTATTACATACCTTTTTCCCCTCACG 414357 33 97.0 34 ........................A........ TCATCCTTTTGTACATTGCTCCGTTTGGCTCTGT 414290 33 84.8 0 ...............A.......AA.C.....C | ========== ====== ====== ====== ================================= ==================================== ================== 43 33 99.6 34 GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Left flank : ATCCAAAACCCCAACCGCCGACTGACAACAATAAAGACAAAGGCAAAAATCCAAGCAGACCATCCGGCGGTGGAAGCCAGAAAGGAACCTCTTCTGCAAAAACAGGGGATGAGACACCAATCGGCATGTTTGCAGGTTTGGGCGCCGTTGCACTGATCGCTATATTTGCCTGCACACTCAGTATCTTGAGAAAAAGAAAAAGGTCATAATCAAAAACAGAACAGCATAAAACGCAGTTCTTTTATCCCCCGGAAGATGACAAAAGTTCATATGCCGGGGCCGGGGGAAATCAGGAAGGAGAAAGTACCCTTTTTTAAAAAGAAAATATAATTTCAATAGGTGCGAATCCCAAGTGAACACAAAATTCCAGGGAGATTCGCACCTATATTTTTATGGAAAAAGGAGGATAATTATGTTAAAATAAAAAATAAGGAATTATATATGTGTAATATTTGTGCAAGATGTTCTAAAACGATGTTGGTATTTTGGGAGATTTTGCT # Right flank : AGCAATAAAACCAAATACCCAAAAAAGGAAAAATCCACTCTTTACAAATCAAGTGCAGAATAGAGCCATTTATATCAGCGCTGCATTTGGAGATACCGTAGTTGTTCACAAACAACCAATCTCCCGATTACGCAAATCCCCTTGACCATCATGACAAAACCCATTGACACCAGCAAAAAATCTAACTATAATAATGGCACAGTAACCCGGTAATTTACCTACAGCGTTGGTCGTTGGGCTGGCGCTGTTTTGTTATGCAGGATTTATTCTTGGATTTGGGAGAATATAACTGTCGGAGGATGAACATGGCAACAATCAAGGAAATTGCAAAGGCATGTAACGTCTCAATCTCAACGGTTTCTAATATACTAAATGGCAAGGAAAAGGCCAGACAGGAGACAAAGGAACTGGTTTTGCAGAAAGCAAAAGAGATGAATTACGTGCCAAATTATATGGCAAAAAATCTGAAACAAAAAAATACCAAAACAATCGGAATCATA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCTCCGCGAGGAGGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.10,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 93014-89900 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOOU010000004.1 Blautia sp. NSJ-34 HP-D35-62_ctg004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 93013 32 100.0 35 ................................ CTGTCCAGATGTTATTGTATCCGTGTAGAGTCCGT 92946 32 100.0 35 ................................ TCCTTTCTGCCGGTTGCGCCGGCGCAAAAAGAGAG 92879 32 100.0 33 ................................ CCGGATTGGCATCAGGTTTTAAGGGGGGATTAA 92814 32 100.0 34 ................................ CGACGGTTGCTTATTATCCATCAGTAAGAGTACA 92748 32 100.0 36 ................................ ATTCTACTTGTTCGTATATACAGAGTGCTCACAATT 92680 32 100.0 35 ................................ CCCGATGGATCATCTGACATATTTGCGCCAGATGC 92613 32 100.0 34 ................................ AGCCATGTGTAATACTGTTTTCCATCTGCTCCTT 92547 32 100.0 35 ................................ TGTTGTGCGTATTGATAGGCAAAACTGAGGTAATA 92480 32 100.0 34 ................................ CCTTTAAGCAAATACAGGTCATCATAATCACCTG 92414 32 100.0 33 ................................ AATGTCAGAGGGGCAGGTCAATGCTACCAGTTT 92349 32 100.0 34 ................................ TGTAATATTCCGTATGCGGCCCCAGTCCATCTTA 92283 32 100.0 33 ................................ CGATCACGCTTTGTGCATGAGTGCTTGCAAACA 92218 32 100.0 34 ................................ TATACAATGAATTAGAGATGGAAGGGGGGAGTTG 92152 32 100.0 33 ................................ CCGGTTTTTACCATCCACTTTTTTTCTCATCAG 92087 32 100.0 22 ................................ TTGTTAGTTGCCAGGTGTTTGC Deletion [92034] 92033 32 100.0 33 ................................ ATCACACAGAGGCTCATGCAGTAGGAATGACGG 91968 32 100.0 35 ................................ CGCAGAGTATGCAGGAGCAGATAACATCTGCCTTC 91901 32 100.0 33 ................................ ACTATGGTCTGCTCAGATATAAGAGCAGGCCGC 91836 32 100.0 35 ................................ ACTCTCCGCTTAAAAAGTTCTATCAGGACACCCTG 91769 32 100.0 32 ................................ ATATCAAAAAAAATTGCATCTATATCTTCTGC 91705 32 100.0 34 ................................ TTATGCCGACACGGACGCAAAGAGTCGTAGCGAG 91639 32 100.0 34 ................................ GGCAAGGTCCTTATATCCTCCCGCCTCATACAGA 91573 32 100.0 34 ................................ AGTGGATATATCGGCGACAATCCAAGCTACTTAT 91507 32 100.0 33 ................................ CCGTGGGCGAGTAAAAGAAAAGCAAATTTATCT 91442 32 100.0 35 ................................ AATAAAATCATACCTGATATATTATCTATTGTTTT 91375 32 100.0 33 ................................ CTGTGAACTTTGCAGGAGTGGAGATCAGACCGG 91310 32 100.0 34 ................................ CCGCCAAGGCACCGATATACTTAAAACTTTCTCC 91244 32 100.0 34 ................................ AACATTTATTACAAACTTAGGAGGGATAACTGGA 91178 32 100.0 34 ................................ CTTCCATTTCATGCTTAAAAGAATTAACGGTAAA 91112 32 100.0 34 ................................ CCCACATCCAACCAATAGGATAGCAATGATTACC 91046 32 100.0 34 ................................ TCCATCGGGATTTGCCAGTCATCAAATATCTTGG 90980 32 100.0 33 ................................ CGGCAGGAACAAGAGTCACAAACGGAGAATTGT 90915 32 100.0 34 ................................ CAGTTATTGACACGATTGGAATAGAGGTATCAGC 90849 32 100.0 33 ................................ ATTTCCAGACGCCCTTTTGCCCGCAGCGCCTTG 90784 32 100.0 34 ................................ AAGTAATCCCAGTTATGAGCCTATGTTCTTCAGT 90718 32 100.0 34 ................................ CAGTAAATAACAACATGGTCCACAAGCGGAAAAA 90652 32 100.0 33 ................................ ACTGCAACGCTCATGATAGCTTGAAGATACACT 90587 32 100.0 33 ................................ AGTTCACCGATGATTTGCCCACCCGGCTCCCTC 90522 32 100.0 34 ................................ ATCCGTCGCTATAAGCTTTATCTTGTTTGGTCCA 90456 32 100.0 33 ................................ CATTTGACGTCCTGTTTTTCTTGACGGAAATGG 90391 32 100.0 34 ................................ TACAGCATCCGTAGTACCAGTTATTGCTTTTATC 90325 32 100.0 34 ................................ ATGGGTACTTTGATACGCTTACCTGTAACAGGGT 90259 32 100.0 34 ................................ ATAGCACACCGGCTTGTCCCTCCTTTCTTACCGC 90193 32 100.0 34 ................................ TCCATCGGGATTTGCCAGTCATCAAATATCTTGG 90127 32 100.0 33 ................................ ACCATAAATTTCGTCCAATTTTGCCGTATCCCA 90062 32 100.0 34 ................................ AGGAATCGGTCATGATTCTGGCATATATTACTAC 89996 32 87.5 33 ...G...T..A..T.................. GTCTTGCCTCTATCAAAGAAAAGTTTGAATTTT 89931 32 75.0 0 ....T.....G...AA.A.C...A...C.... | ========== ====== ====== ====== ================================ ==================================== ================== 48 32 99.2 34 GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Left flank : GATGAGTACCCGCCATTTTTCTGGAAGTAGGTGAGAGTATGCTGGTTTTGATTACATATGATGTAAATACCGAGACAGATGCCGGGAAAAGACGTCTAAGAAAGGTTGCAAAACAATGTGTTAATTATGGAAGACGGGTGCAGAATTCTGTTTTTGAATGCATTCTTGATAACACACAGTGTGTTTCATTGAAGGCTGTATTGGGGGATATTATTGATAAGGAAGTTGACAGCCTCAGGTTTTATTATTTGGGGAATAACTATAAGACTAAAGTGGAGCATATGGGAGTTGACAGGGGGACAGCAGCGGACTCGACTTTGATTTTCTAGTGCGAATAGGAAGTGAACAGAAAAACATTGGGAGATTCGCACCATATTTTGGGGTGTTGGGTGATGGGAAAAGGAGGAATAGAAGGGAAAGGGGTGGTGAGATTAGTGTGAAAGAGTCTATTAATTAGGAGTTTTATACAAAAATAGCTATGAAATTTGGGCATTTTTGCT # Right flank : TTAGTGACCAGACCTTGCAGAAAGAGGTGAGCATAAAGATGAATACAGCAATAAAAAAGAAACTCCCAATTGGAATAGAGAACTTTGAAAAAATTCGGACAGAAGATTTTTATTATATTGATAAAACAGGTCTGATCAAAGACCTTCTATATAATTGGGGAGAAGTAAATCTCTTTACACGCCCCAGACGTTTTGGCAAATCCCTTAACATGAGTATGTTGAAAAGCTTTTTGGACATTGAGGGTGACATAACATATACAGAAAAGTTATTTAATGGATTGGAAATTTCAAAAGAAACAAGCCTTTGCAAAGAATATATGGGCGCATTTCCAGTTATTTCAATTAGCTTGAAAGGCGTAAACGGCATAGATTTTGCAGCTGCGCGGGATATGATGCGTTCCATTATTGGGAATGAAGCGCTGAGGTTCTATTTTTTATCCGAAAGCAATAACCTGAACGAGAAAGAAAAAATGCAGTACAATCAGTTGACTGCAGTGGAT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCACCTTCGCGGTGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCTCCACCCTCGCGGTGGAGTGGATTGAAAT with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-4.90,-4.90] Score: 0/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 44026-44978 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOOU010000007.1 Blautia sp. NSJ-34 HP-D35-62_ctg007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 44026 32 100.0 35 ................................ AATCTTTGCATAGACGGAAGTGCCAGAGGAGACGG 44093 32 100.0 33 ................................ AACCTGGACTGGTATGCAAAAGGCGGATTCCCA 44158 32 100.0 34 ................................ CAGCTATCTACCACAACCTTATTATCATACAGGT 44224 32 100.0 33 ................................ TCTCTATTATACAAAAAAATGCTCCTTTCTAAC 44289 32 100.0 34 ................................ GATTAAATTCATGGTTTCTCCTCCACTTTTTCCA 44355 32 100.0 34 ................................ ATTCCACTGGCTCCCTTGCGGACGCAACCTGTGA 44421 32 100.0 34 ................................ AACAATGATAAGGGGACCGAGGAGGTCTACGGAT 44487 32 100.0 34 ................................ AAATACTGTGTTAGAGTGATACATTACTCACTCA 44553 32 100.0 35 ................................ AATAAGTTCAGGCGGTAAATCTGTTTCTATGGGGG 44620 32 100.0 33 ................................ TATATAGATGACAGGAGAAAAGCGATGAACGAA 44685 32 96.9 34 .........A...................... ACAACGTATGAGACAGGTTTTATATTTCAGTCTG 44751 32 96.9 34 .........A...................... CTGATAAATCCGGTTCAGTTTAAATGCAATATTT 44817 32 96.9 33 .........A...................... AAAGCTGTTGTCCCCTCTGCTTGTGCATGTATA 44882 32 96.9 33 .......................A........ ATGCAACATCTGCTTCTACTCTTGGACAATTAA 44947 32 81.2 0 .............A..C.A..CA...A..... | ========== ====== ====== ====== ================================ =================================== ================== 15 32 97.9 34 GTCTCCGGCTTCGCGCTGGAGTGGATTGAAAT # Left flank : GAATAAATTGCTTTCCCGTGAGACTTTGGAGGCGTATTTTCTGGAGATTGAGAAGAAAATTAAGAATTATACGGAAAATCTGGAGGATGATATGCTGCTTTTGAAACCGGAAGGGTGTAAGTATAAAAGATTTACACTTATACTGGCGCAGCACAGGCATCTGCATACGCATATGGGAATGATTATGGGCGTTATAACAGCAGAGACAGGTCTTTGGCCCAGAGTCCTGGGACTGGAAGGTAAATTCCCGGATGGGGAATATGAGAAATATTTTTGAGGCGAAGATGCTTTTCTGGAATATTTGGATTAGGTGTGTTATAATGATATAGTGCTTTGGTGGTGCGAAACGTAAGTGGACATTAATTTCTTAGGGGATTCGCACTGGAAAAAGCGCATTGTGATAGGGGGATTGGTGGAGGAATGGGGTGGAGAATATAAAACATTAGTTGATTTGTATAAGGAAATGTGTAGAATATAGATGGAAATTGGTAATAATTGCC # Right flank : TGCTTGTAGGAATACAACCACAGTTTTGGGTATTGTCTTTAGCTTCACACCGAAGACAGTCACAATAGTATTAACACTAAATACACCGGACAAAATTCGTACCTTGAAATTAACGTCCACTTAAATTAGAATCAAAACAAGATCACCTACCATTTATTCAACATTTTATATTTACGTTTAATAAAGACATAAAGATAATAATCAGCACTGCAAATTCAAATTTTTATCGCATTTATGCATAAAAATCATCTTGCAAATGATTCCCCAACAATAATACATCCCAGGAGATTTACATGAGAAAGCGTTATAACGTGACCGGAATCTGTATACCAGAGAAACATTATATGGTAGACATATCACAAAAAGTAAAACAAATTGTAGAAGAATACATTGAACCAGGGTATTATTTTGCAATTAACAGAGGCAGGCAATACGGGAAAACCACAACGCTGTATCAGTTAGAAAAATATTTGCAGGATCAGTACATGATTATCAGTATC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGGCTTCGCGCTGGAGTGGATTGAAAT # Alternate repeat : GTCTCCGGCATCGCGCTGGAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : NA // Array 2 309721-312725 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOOU010000007.1 Blautia sp. NSJ-34 HP-D35-62_ctg007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 309721 32 100.0 34 ................................ CCATCTATAATATACTTACAGGTCACCGCCATGA 309787 32 100.0 34 ................................ CGGTAATTTGTCCGGATTGTTGCAATGTCGCTGG 309853 32 100.0 36 ................................ TTTTTGCAAAAACACCTGGTACTCAATGCCTGTTGA 309921 32 100.0 33 ................................ CGATCTTCCTATTGAATAGTTCCATGAGGGCAT 309986 32 100.0 34 ................................ ATGATTCGTTCCTCCCTTCTGGCTGTTCAGCAGT 310052 32 100.0 34 ................................ CCTTTGATCACGAATTTGTACTGCACACTCTCCC 310118 32 100.0 35 ................................ TTTATTTATGGCGTTAAAAAGGCCCCGGCGGGAGA 310185 32 100.0 33 ................................ TCAGTAATTTCATTAGTTTTTTCGTATTGATTG 310250 32 100.0 34 ................................ CAAACCCCGAACTGCTACATTGGCTGGTACATAA 310316 32 100.0 36 ................................ CAAGGTTAATGAGCTCAGTGAGCAAAACAGCAACAA 310384 32 100.0 33 ................................ ATGATGATTTCTGCTGCCAAACAGAGGAAGAGG 310449 32 100.0 34 ................................ CGTTATCTGTCTTAACAGTATTGCTTACTGACAT 310515 32 100.0 34 ................................ CTTTTGCTGGAGGAGGCAGAGGCTTTTGTGTTGT 310581 32 100.0 34 ................................ CGGTATTGTACTCTGTGGTGCTTCCCACCAGGGC 310647 32 100.0 35 ................................ GCTCCCAAATCAACAAACGGGATGTTACCGTAAGA 310714 32 100.0 34 ................................ CCTCATGTGGGTGATTGTCCCGTTACCACCTAGG 310780 32 100.0 33 ................................ TCAAGTGCTGTCTCCGCCCTTTCCGTTACCTGT 310845 32 100.0 34 ................................ TGCTCATATACGATTACTCTACCGGGTCAACCGG 310911 32 100.0 35 ................................ TCTATGATGTGGTTTCTGCCAGCAACCTGGAAATC 310978 32 100.0 36 ................................ ACACTGCATTGTTTATATCCTGGATCTCGGATCGGC 311046 32 100.0 34 ................................ ATTACAAGGAGTAACAAGGCCTTACCAAGGCTGT 311112 32 100.0 34 ................................ ATCCTTTCGACCTCTATTAAGGTGTACCCCGTAT 311178 32 100.0 33 ................................ GTATAATTAATACATAAATGCAAACATTTGTTC 311243 32 100.0 35 ................................ TCTGTAACAGGAGCATAAGCGCCATCGGCAGAACA 311310 32 100.0 36 ................................ CTTCAATTATTCCCTCCTTTATGCAACTATTCCAAA 311378 32 100.0 37 ................................ TCCGTATACATCTTCTGATCTATAGGCATATACTTCG 311447 32 100.0 34 ................................ TTGGTACATTTGCGTATGGGTTGGATGGTTTTAA 311513 32 100.0 33 ................................ TTGTATATCTCGAAGATTTGAGCAAAGGAAAGA 311578 32 100.0 33 ................................ ATGCGCAGGAAAAACCGCCGGAACAGCTACTGT 311643 32 100.0 33 ................................ CAGGTCAGGAAGTGAGAATGCGCTTGCCATACA 311708 32 100.0 33 ................................ TCCCGAATAATCTAATCCGTTTTGTGCTCCTGC 311773 32 100.0 34 ................................ TTCATGCCGTATTCTCTATCGGCAAAATCAAATA 311839 32 100.0 34 ................................ ACCGTCAGTAAGAGAGATATGTAAGGCGGTTGGT 311905 32 100.0 33 ................................ TCCTGAAAAATCAAGTCCATTCTGGGCACCGGC 311970 32 100.0 33 ................................ ATTCCGGAGGCGCTCTCGCTCTGGCGAACAGTC 312035 32 100.0 35 ................................ TTTCCAACCCGGTTTATTGTGCAAATGAGCTGGAG 312102 32 100.0 33 ................................ TCCTACATTCAATTCAAGCTGATGCTTGTTCAA 312167 32 100.0 34 ................................ TATCAATGGAAGCAGGGAAAAGCTACAACAAAGG 312233 32 100.0 33 ................................ TCCTACATTCAATTCAAGCTGATGCTTGTTCAA 312298 32 100.0 34 ................................ TATCAATGGAAGCAGGGAAAAGCTACAACAAAGG 312364 32 100.0 33 ................................ TCCTACATTCAATTCAAGCTGATGCTTGTTCAA 312429 32 96.9 34 ............................G... TTTTGCTTCCTGCTGCCGCTCCTCCTTTCCTTGC 312495 32 100.0 34 ................................ CCCAATGACATGCCGGTCCGTGATTATCCGCCCG 312561 32 93.8 35 ....T..........A................ CATGCTCACCCATTACTATTTGATGGAGCATTCCC 312628 32 96.9 34 ..............A................. TTTTCTTACATCTTCCCAGTTACATAACCGTTTT 312694 32 90.6 0 ......................CA.....T.. | ========== ====== ====== ====== ================================ ===================================== ================== 46 32 99.5 34 GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Left flank : GTTCCGTTCATCAGGTATTCTATGAATCAGAAAGATGGAAAGTTAAAACTTTCATCCAGGACTGGCTGGATTTTATATGAAGGGGATCTATCTGGTTTTGTGCCAATTTTGGAAGCGGGTAAGTATCTGCGGGTAGGAAAAGGTGCTACCATTGGATTTGGACATTATGATATTTCTTATGATAAATAATGGGGAAATAAAAGGCTGGAAACAGTGGGATTGAGAGGGATTGTGATAAAAATCGGCCTTGAATTTTTTGTAGAAAATGCAGATGATATAATATTTGTTCAGAAGATGATTACTAAGCTTATTTTATAAAGTGCGAATGTGGAGTGAACATAGTTTGCCGGGGAGATTCGCACTTGAAAAAATGGTTAAAAATTGATGATGGAGTGATTTTTTTAAGATATATTTGTAGGAAAGGTTGCATTATTAATCAAAAAGGGTTAAAATTTGGTAGAAAGAAACAATATTTATTGGGAATATTGTGCATGTTTGCT # Right flank : TCAGACAAACGTCTTTCCATATAACAGTGAGAGCATATCCCATATTTTCAAAGTATATCTGGATGTAGATATCCCTGTGGAAGTGAGAAAATTCGGATTTCTTGAACAGGTGCCAGAATACAATCTGGCTCCGGGATACTTGGGGATATAAAGACGGTTTTTTCAGGTCTGACACAAATCTTGGTACTGAAAAAAGCGAGGAGGAGGATAGAAGAGAAAAATTGGAGTTTCTAATGGAAACCGTAACCATTTTGTTCAACGGAGGGAAGAAAATTTATGTTTCGGACTATGCAGGGGGAGAAAATGTTGTAAAAGAATTGACAATAGATGCATGCCTCTTTGATATCGGACGGCCGTTTTGGGGACGACCGCGGGACAGAAAACCTGGACATTTGTCTCCAGTTCGGTCCGCCCGGGGAGGGGAAGATAAAGCCGGTCAGCCTGGCTGATAAAGAGGTGTTTACAGAGAACCTGTATGGCTTCTTATGAGAGATGGCAGG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTTCCTTCGCGGAAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //