Array 1 246-2628 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNFO01000018.1 Catalinimonas alkaloidigena strain DSM 25186, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 246 29 100.0 36 ............................. GGGGAAATCGTAACGCGGTCCGCCAGTACGGTTCCC 311 29 100.0 37 ............................. GGGGAAATCGTAACGCGGTCCGCCAGTACGGTTCCCG 377 29 100.0 35 ............................. GATGACCTTGCGCATCAGCAGCAAAAGCGCCTCGG 441 29 100.0 36 ............................. TAGACGTTGTCCCAGACGTCGTTCCAGTCGGGGAAG 506 29 100.0 36 ............................. TGGGTATTCACATTCCCCACCAGATCGTAGCAAGTG 571 29 100.0 35 ............................. CAGCCTGATATGGGACTACTTGACCGCTTTTTACC 635 29 100.0 37 ............................. CCCGCTGGACAACGGATGGATGCACATTGCCTTGCCG 701 29 100.0 36 ............................. TTCACGGCCGCTTCCAGCGCGTTGAACAGGTCGGCC 766 29 100.0 36 ............................. CAAACCGCAGGTAATAGGTGGCCTTCCCTTGAAAGC 831 29 100.0 36 ............................. TGGGAAGCTGGGCCTCTACGTCTACAACCAACGCGG 896 29 100.0 36 ............................. ATCGATCACCGACACCACACGCGAGGCGGTGGCGCG 961 29 100.0 36 ............................. AGCCACCCGAGGTGCAGCCCGAAATCGAGGTGCTGG 1026 29 100.0 36 ............................. TTGGGTTGGTTGGTGGAAAAGTACCGCCATCGAAAC 1091 29 100.0 36 ............................. ATTATCATCACACCATCACCACTCAATACAATGCCG 1156 29 100.0 36 ............................. AAACTACAAGGACGACCAGGGACAAACAGCACAAGC 1221 29 100.0 37 ............................. GAGTGGGCGTACTGCTTTTTTGCAGTTCGGTATGCGA 1287 29 100.0 36 ............................. TTCGCTACAACAGGTCGGGCTTTTGTGCGTCCGGGT 1352 29 100.0 38 ............................. TTTGTTGCGGTACAGGTCCACAACGATGTCGGGATCGA 1419 29 100.0 37 ............................. AGCCTGACCAGGACCACCAGGACGACGCGAAGGGCGG 1485 29 100.0 36 ............................. CGCAATTCCGCGAGGCGGCGCTGGCCTTGCCCGATG 1550 29 100.0 36 ............................. TTTTATTCCATTCAGGTGGCCGACGCCTGGCGCGCG 1615 29 100.0 36 ............................. AGGGGTGCCACCGCCCAACAACACCACCCTGCGCTG 1680 29 100.0 35 ............................. TTGTGATAATAGGGCCGATGCCAAAACCGCATCTC 1744 29 100.0 37 ............................. TCTATACTGGCCCTCGGGTGGACCCAAGGGGGTATAT 1810 29 100.0 35 ............................. GAAGTCGGCGCGGTAGCGGTCGATTACGAGACGTC 1874 29 100.0 36 ............................. CACATGGACTTGCACCGCAGTCGGATACGGCCGGAT 1939 29 100.0 37 ............................. CATCTCTCGCAGCGGCCGTGGGCCCTGAACCTGATGA 2005 29 100.0 36 ............................. TTGTAGCGCTGTGCGAACAGTGCCCAATTCTTCTCC 2070 29 100.0 39 ............................. GGGGTGTATACGATTACTGCAAACGAGCTAGACGTGCCG 2138 29 100.0 37 ............................. ATAGTGTTGTAGCTGTCTCATTTTGTAGAAATTGGGT 2204 29 100.0 36 ............................. GCGAATCCTCGTAGGTTTCCGCGTACACGTGGGCGG 2269 29 100.0 39 ............................. ACGTGAAGTGCAAGGGTTGTAAACGAAAGCTTCGCGCGC 2337 29 100.0 38 ............................. TCGGTGATGATCGTGGACCCCGTGCAGATCGCCAACAT 2404 29 100.0 38 ............................. AAGCTGTCGACGCACCTGGCACGGCACACCTTCGCCGA 2471 29 96.6 36 T............................ GAGTACGCCGGTCGGCTGAATGGCCACTTCTACGTG 2536 29 93.1 35 ...............AC............ CGCATGGCAGAAGAATTGTACGGATACGGCGATTT 2600 29 75.9 0 .T..C..........AC..A.......GC | ========== ====== ====== ====== ============================= ======================================= ================== 37 29 99.1 36 GCATTAATCGCACCTGTTGGTATTGAAAG # Left flank : AGGCGAGCGAAGTCGGTTTCTGTAAGTCGTCGGCTCCTCCCTTCTCGGCTACCCTCTGCGGGCATCATACCCCTCACCCTCGTATTAAAACGGCCGAAATGACGTCTACAGGCGCAGAGGGGCTGTCGTCGGCTGCCCAGGGATTTTACCTAACTAGGAGCTGACGCTTTTCAGCATTCGTTGGTCCTTCGGACATACACGTTCTTTGACGTATGAACCCATATTTTGTCCATTTTTGCACGTGGG # Right flank : CAGAAATAAGGTTTCACCTCAGTGGCTGCACCTGTTCCGAAACGATGTTGTATATGGTCTGCTTACTGATCCCGAACATCTCGCTGATTTGCTTCAGGGTATGTTGCCTTTGTTGGTATAGCTGAGCAATGAGTTTTCGCTTCTGCACACCGAGGGAGCGAGGACGCCCTCCTAACCGACCGCGTGCCCGTGCCGCTTGCAAGCCCGCCTTCGTCCGTTCTCTGATCAAATTCCGTTCGAACTCGGCTAGAGCTCCAAAGATGTGAAACACCAACTTACCGGTGGAAGTGGACGTATCGATGTTCTCCTGCAAACTCTTCAGCGCAATGCCTTCCCCTTCCAGATAGGTCATCCACTCAATTAGATTGCGTAGCGATCGGCCCAGTCGGTCCAACCGCCAGATTACGAGGGTATCACCCGTCCGCAATAGGTCTTTAAGCTGTTGCAGGCCCGGTCGATGCGCAAGCGCACCACTCAGCTGATCAGTAATGATTTTCTGA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCATTAATCGCACCTGTTGGTATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.30,-2.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 3951-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_FNFO01000030.1 Catalinimonas alkaloidigena strain DSM 25186, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 3950 29 93.1 34 ...............GT............ AAACGTGCATACAGCGGTCATGCAACAGCAGCAC 3887 29 93.1 36 ...............GT............ CGCTTCCCCTCCTGCTTTTCGCAGCCTGTTTTGCGG 3822 29 93.1 36 ...............GT............ GGGCAACGACGCGCTGGCGCTCTACGAACTCGACCT 3757 29 93.1 36 ...............GT............ TGAGCTGCAGCACCACCTTGTCGTGTTTGACGGGTT 3692 29 93.1 36 ...............GT............ TCCGAATAAGCGTATCCCCTGCCTGGTTGTAGATGT 3627 29 93.1 36 ...............GT............ TTTCCTCTGCCGACCTCAACGCGGCCGTGCGCCAAC 3562 29 93.1 36 ...............GT............ ACGGCTGGAATGCCCACAACGACGTAATCCCAGCCG 3497 29 93.1 38 ...............GT............ GAGGGCAGTTCTACTGGTGCGCCTGGGCTGCGTGGTAG 3430 29 93.1 37 ...............GT............ ATGTCGGCCGCCCCGTTGTTGGCATAGGCCACAAATG 3364 29 93.1 35 ...............GT............ CAATGCCTACGGCCTCTACGTCGATCTGCGAAAGG 3300 29 93.1 35 ...............GT............ CAAATGGGGCAGATAAATTCACTGATGCGGTGCGC 3236 29 93.1 36 ...............GT............ TTCACCCTCCATGTCTTCTGGGCGAAAAACTCAGTC 3171 29 93.1 37 ...............GT............ ATCGAGAACGTACCCTCGGCCGGGTGCAGCACTGTCA 3105 29 93.1 37 ...............GT............ TTCACCGCACCCTTGCAATCTTAATCCTTACGACTAT 3039 29 93.1 36 ...............GT............ CCAAGACTACCCGCGCGTGAAGCGCAAGAAAAAAGG 2974 29 93.1 35 ...............GT............ TTGGTGTACGGCAGGGAACCTACGCGGTCGCGGTG 2910 29 93.1 35 ...............GT............ TAGCGGCCCTCTACCTCAACCACCGCAACAAATGG 2846 29 93.1 37 ...............GT............ GCGCTGGTGATCCTCAACAAGCTCCTGCTGGAACACC 2780 29 93.1 35 ...............GT............ AAAAGCAAGACCTCAATTCAGGCCAGAGCCTCACG 2716 29 93.1 36 ...............GT............ AGCAGGAAATGGAGCGGCTGAGTAAGCTGATTGCCC 2651 29 100.0 38 ............................. AAGTCAGCAGCTTGTCGCCATCCGTGGCCGAACCGGGT 2584 29 100.0 37 ............................. TGGCGTCGCAGCCCTTTGCCTCGTAGGCGGCATCGAG 2518 29 100.0 35 ............................. CCCGAAAGCATTAGGGCCAAACAACTGGTTAGCGA 2454 29 100.0 37 ............................. CAGGATAAGGACCGGCACCTGGTGCACGTGGCCTGTA 2388 29 100.0 36 ............................. TTTGGTATGGAATCTGAACAAACCGAACTCATCGCC 2323 29 100.0 38 ............................. TTGTTGGCGTAGGCCACGAAGCTGCCGTTTGAGTTGGA 2256 29 100.0 35 ............................. TACCTGACTTTCGGATAAGATCACCTGTTTCGGTT 2192 29 100.0 37 ............................. ACGGCGATCAGCCCCCGCGAAGTCTTTCTGGCCGGGC 2126 29 100.0 36 ............................. CTAACCTTCTCTTCGAAACAGCCCTGACCGCGCCGC 2061 29 100.0 37 ............................. ACGAATACCGCACCGACCTACTCGCCCTGAAAGCGGT 1995 29 100.0 37 ............................. TAGCCTGTCGCCCCTCTTATAACAAAGTTCAATCAAC 1929 29 100.0 36 ............................. AGGTTTGAGTGATCGTGAATTCTGTATTGGCAGGGA 1864 29 100.0 35 ............................. TCTTTTCCGGGTAAGAAGATTGCGGCCTGACGGCA 1800 29 100.0 36 ............................. TCGAAGCTTGCGCTCCGCAGGCATTTGAGTTTGGTG 1735 29 100.0 36 ............................. GTCGAAGTCTTCGATCTGCGCTTCCTGCGCGTAGTC 1670 29 100.0 38 ............................. GAGAAGTCCACTTCTACGCAGGATGAGCCGACCGCCGA 1603 29 100.0 35 ............................. GAGGTGGACGTGATCGAATCGTTGACGTTGTACAT 1539 29 100.0 36 ............................. TACGCCTTCCTCGTGTACCCAGGCGTTCTGTGGATC 1474 29 100.0 37 ............................. TCATCGTACCGCTCCACGACTACAACCAGATCCGCCC 1408 29 100.0 35 ............................. GGAAAGTCGTCGTGTTGACCGACGAGAAAGAAGAA 1344 29 100.0 36 ............................. ACGAGCATCCGGAAGCCATTGCCGCGTATTTGTTGA 1279 29 100.0 38 ............................. TCTAACAGTTGTTACATACCTACGATTATAATTCTAGG 1212 29 100.0 36 ............................. AACATTCAACGCTTCGGAGATGGCCAGCAGGTGATG 1147 29 100.0 36 ............................. GATGGCGTATTCCTTCTGTTTCTCGGCTACGCCGAC 1082 28 96.6 38 ......................-...... TCGTACTTCGCGTATGACGGGTTTTTTGTGTTTAGGGT 1016 29 100.0 37 ............................. GCGAAGAATCGACCAAGCCCGCCAACATGGTAGCTAC 950 29 100.0 38 ............................. TCCGACAACGCGACCTACAGCTTCACGGGCGAAGGCCA 883 29 100.0 37 ............................. AACTGGATCGGCACCCTATCGGCGGCCATGTTTGCGG 817 29 100.0 37 ............................. TTACCAAGCGCATGGGCGAGGTAAAACAGGAGCTAAA 751 29 100.0 37 ............................. ATCGAATACCCGCCGAAGGCTGCCGGATGGCCTATAT 685 29 100.0 35 ............................. CCTTTGAACGCCGAGCCTTACGGCGTTTTACGCGA 621 29 100.0 40 ............................. CCGAGGCCCGCCCACCGGTAAGTGGTAAAATGGTGGAATT 552 29 100.0 38 ............................. GAGGCTCACCATCTAAACAGTATTCAGGACGACGGGGT 485 29 100.0 36 ............................. AAGAGGAGGATGCGCTGTTTCTGCGCGAGGGCCTGC 420 29 100.0 37 ............................. GAGGTACAGCGCCTGCCCGACGGACGGGTGCAGGTGC 354 29 100.0 36 ............................. CCGTTCCAAGACTTATCTAATTTGCGCCCGACCTTG 289 29 100.0 36 ............................. TACACCACGCCCGATCTGGAAGCCTACCTGTTGCGG 224 29 100.0 36 ............................. AAGTCCTGCATCACCTTGAGCAAGCGACGACGGCGA 159 29 100.0 35 ............................. ATGAAAATCTCCACGGGACCGTTGACGGGCACGAG 95 29 100.0 38 ............................. TCCGACAACGCGACCTACAGCTTCACGGGCGAAGGCCA 28 28 96.6 0 ............................- | ========== ====== ====== ====== ============================= ======================================== ================== 61 29 97.6 36 GTATCAATCGCACCTACTGGTATTGAAAG # Left flank : AGGCGAGCGAAGTCGGTTTCTGTAAGTCGTCGGCTCCTCCCTTCTCGGCTACCCTCTGCGGGCATCATACCCCTCACCCTCGTATTAAAACGGCCTAAGTGACGTTTATAGGCGCTGAGGGGCTGTCGTCGGCTGCCCAGGGATTTTACCTAACTGGGAGCTGACGCTTTTCAGCATTCGTTGGTCCTTCGGACACCCCCGTTCTTTGACGTATGAACCCATATTTTGTGCATTTTTGCTTCG # Right flank : A # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:0, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATCAATCGCACCTACTGGTATTGAAAG # Alternate repeat : GTATCAATCGCACCTGTTGGTATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.50,-2.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //