Array 1 213-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL882514.1 Actinomyces sp. oral taxon 170 str. F0386 Scfld14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 212 29 96.6 32 ............................C AACTTGATCCCTGGGATCCAGGGTGTCTGGGA 151 29 100.0 32 ............................. GCCCCCGGTTTCGAGGGCCGCAAGCGCTTCGC 90 29 96.6 32 ............................T CCACGGTCGCCTGCATGTCCCGGTACTGCCTA 29 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTAAACCCCGCGCGAGCGGGGATGATCCG # Left flank : GCAGCGTGCTGTGGCCGGCGGATCGAACTACGCTGGAGAGGATGCGGGAGGATGGTAGTTCTAGTTCTGTCTGCCGCCCCTGCCTCGTTGCGGGGCTCCATGACTCGCTGGTTGTTGGAGGTCTCTCCTGGGGTCTTCGCCGGGCATGTTTCAGCTCGAGTACGAGAGCAGCTGTGGGAGTTGGTTCGCGCATACATCGGGGACGGTCGTGCACTGCTGATCTGGTCGGTGCGATCCGAGCAGCGGTTCGAGATCGCCTCTTTGGGGCACGAGCGTGAACCGGTCGATATCGAAGGGTGCCTCGTCATGCGTACCCCGTACCGGCAGATCGAGGGATCACAGGCGATCCCCGGCGCCGTCAGGCCTCCGAAGGAGTCCTGGTCGATCGCTGCGCGACGGCGGCGCTATCGGAACTCTGCGGAGCGAGCGCTAGGTCAGCAGTGAAGGTAAACGCGGTCTGGTAGGGTGACTCATCGTTGGGATTCCAAGGATCCTCAAGT # Right flank : G # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCGCGCGAGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1-456 **** Predicted by CRISPRDetect 2.4 *** >NZ_GL882569.1 Actinomyces sp. oral taxon 170 str. F0386 Scfld197, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1 28 96.6 32 -............................ ACAACAAAGAGACGGCCACGCGAACTGACCGG 61 29 100.0 32 ............................. ACGATCAACAACAAGAAGATGTTCTACATGAC 122 29 96.6 32 ........................G.... CGCCGGTCCTGGGGGCTCGAGTCCGGGAACTG 183 29 96.6 32 ............................C AAAATCCCGAATCGCACCAGCCGTATTCCGCA 244 29 96.6 33 ............................C GGCCGGCCGAGCGCGGGCCGGTACGGAAGCGGC 306 29 100.0 32 ............................. GCGCAGGGCACGATCGTTGGCTACAAGAACGG 367 29 96.6 32 ............................T CGGCCGTCAACAGTCGCCGTACCCTCAGGGTA 428 29 93.1 0 ......................CA..... | ========== ====== ====== ====== ============================= ================================= ================== 8 29 97.0 32 GTAAACCCCGCGCGAGCGGGGATGATCCG # Left flank : | # Right flank : GCTGACCTCTTGGGCTGTGGAGTGGCGTGTTGTGCACGCCTGCACGCGAGGAGGCTCACTGAGGGTCGTTCACACTCCGGGGGCTTATTCATGAGGTCCGTCGTCGGATCTGCCGTTCTCCTTCGGTGTCTGAGTGACTCGGTGTCCGCGCGGAGGATATGACTGGCTCCGCAGTCAAAGTGTCCCAGAGAAGACCTTGGAATCCTGCGATTCTCGTTTGTGCTATGACGTTACTGCGGCGTTCGTGTCCGCAGTGTGGATACCGGCCGCCGCCCCTACCGATGGTCACCGCGACAAGCTCAGTGAATAAGCCCCTGGGAACGTCGTCGGGCTACTGAGAATGCCTGAGCCATCGATCTGCTCATCGCCGGCCGATACCGCGATAGGTCCAGCCGGCCGCTTTCCAGTCCTGCGCATCCAGGCAGTTGCGTCCGTCAATCACGTACCGGGTACGCGCCAGGCCAGCCGCCTGGGTAGGGTTGAGGTCCTGGTACTCCCGC # Questionable array : NO Score: 5.58 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAACCCCGCGCGAGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //