Array 1 516025-518304 **** Predicted by CRISPRDetect 2.4 *** >NZ_FTNY01000001.1 Chryseobacterium shigense strain DSM 17126, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 516025 47 91.5 30 A..T............C..............A............... TTATGTTCAGTATTTATGTTCAGTATTTAT 516102 47 100.0 30 ............................................... TGCCCGTCAATAGTATTCGGTAGTCTACCG 516179 47 100.0 30 ............................................... TAAAACGTGTCTTCATAATTAAACTCTATA 516256 47 100.0 30 ............................................... TATTGGAGTTGCTGATTTGCTTATATTATT 516333 47 100.0 30 ............................................... CGGCCGTCAAAGTTTGAAAAGTACTTAATA 516410 47 100.0 30 ............................................... TATGTTGAGTAGATCAGGATATACTTTAGG 516487 47 100.0 30 ............................................... ATACAATAAATTAACAATTGAAGAATTTTT 516564 47 100.0 30 ............................................... ACTATTGTGGAGGGTGAATTTGATTGCATG 516641 47 100.0 30 ............................................... AAACATCTGAAAGAAATTCAAAACTTTCTT 516718 47 100.0 30 ............................................... TTTACCATTTTCTTCCAGCCAGTCCAAGCC 516795 47 100.0 30 ............................................... TCACACTCCGCCAGGTTCTCCGGCATGTAG 516872 47 100.0 30 ............................................... TTTACCATTTTCTTCCAGCCAGTCCAAGCC 516949 47 100.0 30 ............................................... TCACACTCCGCCAGGTTCTCCGGCATGTAG 517026 47 100.0 30 ............................................... TTAGTTTTCTAATTGAACATCGATGATTTT 517103 47 100.0 30 ............................................... GTGGAATGATTAAATCCAAATCCATCAGAC 517180 47 100.0 30 ............................................... AGACGGGTAGCAAGCAAGGCTTAGTGGTGC 517257 47 100.0 30 ............................................... TTTGCCTGCGATGAACCGGTGCAGACTTAC 517334 47 100.0 30 ............................................... TTCGGGCTGCTGACTCACTTATACGTTGCT 517411 47 100.0 30 ............................................... CCTCGACCAAACAATCATAAAAGCTATTAA 517488 47 100.0 30 ............................................... CGATATTTTGGAATTCTGGCCAAAAGTAAT 517565 47 100.0 30 ............................................... AGGCATTCCTAACAACTCAGTTGTAGGAAC 517642 47 100.0 30 ............................................... TACGAAAACTGGGCCCGCTTTATAGATAAC 517719 47 100.0 30 ............................................... CGGTTGATTCACACCCACAATTAAAAAACT 517796 47 100.0 30 ............................................... AGTTAATCAAAGAATTTAACAATCAAACCG 517873 47 100.0 30 ............................................... TCCTGAAGGTATTATCCAGATCAGGGAAAT 517950 47 100.0 30 ............................................... TTTGACAAATTATCTGGCACACGATGGAAA 518027 47 100.0 30 ............................................... CCAGCGCAAATGAAAGCTTTCTTCCAACGT 518104 47 100.0 30 ............................................... TGGAGACTGAATTAAAGCCAAATATCTTTA 518181 47 100.0 30 ............................................... AAGATTTGCACCTCTAAGATTTGCACCTCT 518258 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 30 47 99.7 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : AACGCTTAAATCTCCTGATTTTACGTTAAGTGTTCCCCAACGAGGAGCCATTCCACCTTTGTGAAAAGCCTTCCAGTTTACTACAGAAGCAGCAACATCCACTGGCAATACTTCACCTTTACTTTCAGCTACTGTCTGCTCCGTAGCTGTAGATGCAGTTCCTGCTGATTTGTCTTTATTACATGATGCTGCAAGCAATCCTACTCCTACTAATGCAATTACACTAAGTTTTTTCATATTATTTATTGTTTTAAAAAATTTAATTAAAATACTAAATTTCAGGATTCAAAAATATAAAAACCTCACCAATTATCACCTTACCATACATCAAGAAATAGAATTTTTCATATTTTCCTTCCGTTATACAATATGAAATATTGAGAAAAAAGAAAATCTATAGCATTTCAATCCTCTCTAAAATTGCGTATTTTAGCTATTTGCATCTATCATAGCTCTACGGTTAATCAAATAAATTTAGGTGCAGAGTAAGAGTGATATTT # Right flank : CCTCAAAAAACAATCTACTGAAAATCAGCAGATTGTTTTTGTTTTTAGGATTTAAAATTTAGAATAATTCAAGCTGTTGGAAGGTTGGAGGCGGTTCTTCTTTATTTCTGGCAAAGAAAATCTCAATATCGCCAAATTGTTTATCCGTAATACACATAATTGCCACTTTTCCTGCTTTTGGCAACATGAATTTTACTCTTTTAATATGAACCTCAGCATTTTCACGACTTGGACAATGGCGGACATACATCGAAAACTGAAACAATGTAAATCCATCATCGATTAAAGCCTTACGAAAGCGATTCGCATCCTTCATATTAGCTTTAGTCTCGGTCGGTAAATCATACAATACTAAAACCCACATAATTCGGTAAGCATTAAACCTTTCGGCGTTCATATCAGTTCAGGATAAGAGATTAATCGCTTTTCTCCTGTGTAACATCTATAAAGCGAAGTTACAGTTGTTTTTACAGCCACCAATAATGGTCTTATTTTGTCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //