Array 1 2697688-2704289 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP060203.1 Chryseobacterium manosquense strain Marseille-Q2069 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =================================================================================================================================================== ================== 2697688 47 87.2 147 ....C.....................................GGCGA AATGGATTGGGAAAGTTATGGCTGAGCCAAAGCAATCACGAAATAAAAAAGGATAAATCTATAGAATTCTAAAATGGAAATTTAAAGCTTTTGAAATTCTGAAAACCCCGTTAAAAACCTCCATATCAGGAGGTTTTTCAGTTTGAG TCC,GG [2697723,2697729] 2697887 47 100.0 30 ............................................... TAGTCTCCTTTGGTATCTCTTACTTTGGCA 2697964 47 100.0 30 ............................................... ATGTAACGCCTTTCTCGTCGTGGTGGCGGT 2698041 47 100.0 30 ............................................... AATATGGAGTATTAGATAAATCCATGAGAG 2698118 47 100.0 30 ............................................... GACTTTGGCCTCATATGGAAACTGAATGTA 2698195 47 100.0 30 ............................................... GCAGTGCCAGTCTTTCAGATTCTGCTACGT 2698272 47 100.0 30 ............................................... GTTTCAGATTCTGTGCTGGCATTTTCCACA 2698349 47 100.0 30 ............................................... TGCTGTTCTGTTCCAGCTTCCGGAAATAGA 2698426 47 100.0 29 ............................................... AGTTTGCGTTGGATATAAGATACCGATTG 2698502 47 100.0 30 ............................................... TGAATTGGTTGGTAGTGGGTAACAACTTGC 2698579 47 100.0 30 ............................................... GGGAGCAAAGTATTTTTCAAACAGCGATTC 2698656 47 100.0 30 ............................................... AAAGGAACAGATGGCGGAAAGAAATGCTTT 2698733 47 100.0 30 ............................................... TTGAGAGGTATTAAACCGACTAGCAATCTC 2698810 47 100.0 30 ............................................... GATAATGTTAACCTTACTAAACTTTCACAG 2698887 47 100.0 30 ............................................... GAGAACTTAACCGGCTGATAAGAGTACAGT 2698964 47 100.0 30 ............................................... GGCTGATTCATCTTTACGATCAAATGTTAC 2699041 47 100.0 30 ............................................... AGGTGAAAAGTACGGCAGTTTTGATATGGA 2699118 47 100.0 30 ............................................... GGATTAAAGTCTGCAGTCAAATCGAGGTTA 2699195 47 100.0 30 ............................................... GGCAGCAGCGAAAATATTTCCGTTCTGCCA 2699272 47 100.0 30 ............................................... ATTAAATGACACTTTTAGACTGGAGGCATC 2699349 47 100.0 30 ............................................... CATATTTCCTGCAGGGAACGCCTTTGTAAA 2699426 47 100.0 30 ............................................... ATGAATACCGATCCGCTAGAATTCTTCTTA 2699503 47 100.0 30 ............................................... CACCAGACCATTAAAATAACAATCTTGAAT 2699580 47 100.0 30 ............................................... TGATGCCGATAAACGTTTCCCTTTCCAGCA 2699657 47 100.0 30 ............................................... ACATCAACATACTTGTGTTTTTTGTGAATA 2699734 47 100.0 30 ............................................... GATGGCTGCCTTTTTCTCGTCTACCAAACC 2699811 47 100.0 30 ............................................... GTTTTTCGGGTTCACGTTCAAATCTCCCGT 2699888 47 100.0 30 ............................................... AACATTCGAATCTCTGACGGTTTTTTTTTG 2699965 47 100.0 30 ............................................... CTACACACATTCCAAGTCTTGAGAGTTGAT 2700042 47 100.0 30 ............................................... TGGAAGTCCTTGGACTTTAGCAACTTATAT 2700119 47 100.0 30 ............................................... ATTTATAAGGGAGAATACAACCCAACCACA 2700196 47 100.0 30 ............................................... ATGGTCTCTATAGTATCCTAATGCTTTACA 2700273 47 100.0 30 ............................................... ATTTGCTAAACAATTAACAAAAACTGTTTA 2700350 47 100.0 30 ............................................... CATTTCAGGTAATGTAGAAATAATTGAAAA 2700427 47 100.0 30 ............................................... ACATCTTCGGCAGCACCATAAATCAGTTCT 2700504 47 100.0 30 ............................................... TGGTTATTACAACGACCTGAAAACAGACGG 2700581 47 100.0 30 ............................................... GATTTTGTGACATTAACTTCTTATTCAGCG 2700658 47 100.0 30 ............................................... TGTCATAGGTTTGGTTTTAAAAATTAATTG 2700735 47 100.0 30 ............................................... AGTAAGCCAGTGTTTCAGCAAGTTTGGTCG 2700812 47 100.0 30 ............................................... ACAAAACGGAAATGCATTGAGGAACTTCAG 2700889 47 100.0 30 ............................................... GAGGGATCCTTGTACCGATGCAACATGTAT 2700966 47 100.0 30 ............................................... ACTGATTCTGCGAGCCAGGATAGCGCAGTT 2701043 47 100.0 30 ............................................... TGGTGGCGAGGGTAGCCTCGAATTCTACAG 2701120 47 97.9 30 ....C.......................................... CGGAAAGGAAACCAAATCTTTCACTGCAGC 2701197 47 97.9 30 ....C.......................................... CGGAGGCGCACAGTCAACACCCCCTAGGAA 2701274 47 97.9 30 ....C.......................................... CCTGCTATGATGAGCGAGTACGTGACACAA 2701351 47 97.9 30 ....C.......................................... AATTTGAATGACTGTGAAAGGTCATAAGGT 2701428 47 97.9 30 ....C.......................................... ACGCTGAAGGACTTACAACAAAAGCAACAG 2701505 47 97.9 30 ....C.......................................... AAGGAGAAAACAATAATCAATGAATTACGC 2701582 47 97.9 30 ....C.......................................... TAGGAAACGAATTTGCTCATCAAGCGACTG 2701659 47 97.9 30 ....C.......................................... TGGCCAAACTACCGGCTCGCCTAATGCAAT 2701736 47 97.9 30 ....C.......................................... GTTTTATGAAGCGATGAAAGATCTTGACAG 2701813 47 97.9 30 ....C.......................................... ATGAGTGATATATTTAATTATGGTGGATTT 2701890 47 97.9 30 ....C.......................................... ACAACCTCACACCTTCCGAAATATACGAGG 2701967 47 97.9 30 ....C.......................................... AAAGTGTTGAGTCTTTCACGGAAATAATCA 2702044 47 97.9 30 ....C.......................................... GATTTAGCAAGGGCTTATGACAAAGAAATG 2702121 47 97.9 30 ....C.......................................... TGAAGAACCCGCAGTAACTGCGACGATTTT 2702198 47 97.9 30 ....C.......................................... GGTTTGTTATCGGTTGCTATACAGGGCAAA 2702275 47 97.9 30 ....C.......................................... TCTTGGTCATCTCTTGTTATTGTGTTATTT 2702352 47 97.9 30 ....C.......................................... GAGGCAGAGGATTGCGTCGAAAGTTGCGAA 2702429 47 95.7 30 ....C..................G....................... TAAAAAAGGGTCGTTGCAAGACCGCCTGAA 2702506 47 97.9 30 ....C.......................................... ACATTGGCTGATGTCTTCGATAATAGTGCC 2702583 47 97.9 30 ....C.......................................... TAGTCGGAGACGGCACGTTATTGATAATAT 2702660 47 97.9 30 ....C.......................................... ACTATGTATTTGTGATTGATAGAACAGCAA 2702737 47 97.9 30 ....C.......................................... GCAGTTACCACCTTTGGAAAGCACACAATC 2702814 47 97.9 30 ....C.......................................... TGTTCTAATACAAGGGAATTTAAAAATTTT 2702891 47 97.9 30 ....C.......................................... AAAGTGTTGAGTCTTTCACGGAAATAATCA 2702968 47 97.9 30 ....C.......................................... GATTTAGCAAGGGCTTATGACAAAGAAATG 2703045 47 97.9 30 ....C.......................................... TGAAGAACCCGCAGTAACTGCGACGATTTT 2703122 47 97.9 30 ....C.......................................... GGTTTGTTATCGGTTGCTATACAGGGATAA 2703199 47 97.9 30 ....C.......................................... TCTTGGTCATCTCTTGTTATTGAATTATTT 2703276 47 97.9 30 ....C.......................................... GAGGCAGAGGATTGCGTCGAAAGTTGCGAA 2703353 47 95.7 30 ....C..................G....................... TAAAAAAGGGTCGTTGCAAGACCGCCTGAA 2703430 47 97.9 30 ....C.......................................... ACATTGGCTGATGTCTTCGATAATAGTGCC 2703507 47 97.9 30 ....C.......................................... TAGTCGGAGACGGCACGTTATTGATAATAT 2703584 47 97.9 30 ....C.......................................... ACTATGTATTTGTGATTGATAGAACAGCAA 2703661 47 97.9 30 ....C.......................................... GCAGTTACCACCTTTGGAAAGCACACAATC 2703738 47 97.9 30 ....C.......................................... TGTTCTAATACAAGGGAATTTAAAAATTTT 2703815 47 97.9 30 ....C.......................................... CCTGTAAGTGTGTTCCGCCCCCTCTTTTCT 2703892 47 97.9 30 ....C.......................................... GTGAAATTGATAATTTTAACTTGAAGTTCG 2703969 47 97.9 30 ....C.......................................... GGAAGTAAGACCGGTAATAGTTTCTACTTC 2704046 47 80.9 147 ..G.C...................T.A...............GGCGA AAGGGATTGGGAAAGTGTTGGCTGAGCCAAAGCAATCACGAATTAAGAAAAGATAAATTTATAGAATTGTAAAATGGAAATTTAAAGCTTTTTAAATTCTAAAAACCCCGTTAAAAACCTCCATATCAGGAGGTTTTTCAGTTTGAG TCC,GG [2704081,2704087] 2704245 45 78.7 0 ....C.......T......................T.--C.A.GG.T | ========== ====== ====== ====== =============================================== =================================================================================================================================================== ================== 83 47 98.3 33 GTTGTGTCGTGTCACGAAGATAATAATTTTTGAAAGCAATTCACAAC # Left flank : AATGAGAAGAAATACATCTAAAAAAATATGAATGCCGAAAGGTTTAATGCCTACCGAATTATGTGGGTTTTAGTTTTATACGATTTACCAACCGAAACCAAAGCCAACATGAAAGCCGCCAATCTTTTCAGAAAAAGATTGTTGGATGATGGTTTTGCATTGTTTCAGTTTTCTATGTATATGAGGCATTGCCCAAGTAGAGAAAATGCAGAAGTTCATATTAAGAGGGTGAAATCCATCTTGCCCAAGGCGGGCAAAGTGGCGATTATGTGCATTACCGACAAACAATTTGGCGATATTGAAATCTTTTTTGCCCGAAACAAAGAAGAACCTCCACCAACTTATCAGCAATTAGAGCTTTTTTAGCATCTGTAATTAAAAGACTCCATCAGTATAGAAAAAGAGCTGCGTTTAAACCAAAACAGAACGATAGAAAGCGGAATTTTAAATGCTGGAAAAACCTCAAAAACCTCCTGTGCTAGGAGGTTTTTCAATTTGAG # Right flank : TTCGGCGAAAAACGCAGGACAAAGCCAGGCTGAGCCAAAGCAATTCAAAACCCATCAAGAAAGACGACAAAAATAATTTCAGCTGTGATCAATCACGAAGATATCAAGCTCAACCTCGATGAAATTTTCAGGATTAATACGATGAAAGATTATATCATCATTTATACCGTCACCAGAAAACTCATCGTGCATCAAACCATGAAATCCATCATGGAGAAAATAAATTTAGAGAACTTCATCAGGGTTCATAACTCGCACATCATCTCGCTGAATCACCTGCAAAGTGTAGGCAAAAACAGCATAGTGGTCGCCAACGAACGAATTCCTGTGAGCGAAAAATACAAAGCTTTTTTAACGGAGTTTATTGATCGTTTTAAGTAAAAGCCGATTTTATTTTTTGATTATGGTGAGGTCTTTTGATCCGAATTTTCTTTCAAGCCAAGCTTTCAACTTTGCTTCATCTATGGATTTTTCGGCTTGGTAAAGGATAATATTTCCTT # Questionable array : NO Score: 2.81 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.11, 8:1, 9:0.74, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTCGTGTCACGAAGATAATAATTTTTGAAAGCAATTCACAAC # Alternate repeat : GTTGCGTCGTGTCACGAAGATAATAATTTTTGAAAGCAATTCACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-30] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //