Array 1 30758-29570 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHOC01000006.1 Levilactobacillus huananensis strain 151-2B contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 30757 28 100.0 33 ............................ TCCCAGAACTATCTAATTTTACGTACCCATCGG 30696 28 100.0 33 ............................ TCCAGACACCAAAAAGTTCCTGGGACAATTTGT 30635 28 100.0 33 ............................ CTGTGGGGCAGTGACCAAGAGATGGCTATGTCG 30574 28 100.0 33 ............................ TCATAGAAGCAGTTTGGTAGATACCAGTCATCG 30513 28 100.0 33 ............................ TTTAAAATAAATAATTTATTATTTATAATTTAT 30452 28 100.0 33 ............................ TCAAATAACCAGTAGTTACCTTCTGATCTAAAA 30391 28 100.0 33 ............................ CCTCAAAACTTCTCTTGACGGCACAATTACTGA 30330 28 100.0 33 ............................ CTTAACGTACCCATCGGCTTCACAATCGTAGGT 30269 28 100.0 33 ............................ GTCTCGTCTAAGCTGTCTTGGGCCCAAATCAAT 30208 28 100.0 33 ............................ TCTCAGCCACCCAGTTGTCATAGACTTTTCCAC 30147 28 100.0 33 ............................ CACTGCTGGATAATGGTTTTGTTGCCTAACCCA 30086 28 100.0 33 ............................ ATAATGACTCTGCGACAGTCGATGAGTCATCCT 30025 28 100.0 33 ............................ TAAGCATCCAGATAACTTAGATATCTTTAATTT 29964 28 100.0 33 ............................ CTTTGAAGACTGTACTCTAATTTCATTGGGTGA 29903 28 100.0 33 ............................ TGACCTAGGTTTTTCCAATGGCACGATAAATAA 29842 28 100.0 33 ............................ CATCTAGCCTGTAGTTATCAGTCAATAGCGGTG 29781 28 100.0 33 ............................ TTAGACACCAATGACGAAGAGCTGCAGCCAAAT 29720 28 100.0 33 ............................ CTTGGGCGAGCAATCGGATTTGAATTTTTCGGC 29659 28 100.0 33 ............................ CCGCTTACGAATTGAGCGCGAAAAAAGAGGCTG 29598 28 96.4 0 ...........A................ | G [29577] ========== ====== ====== ====== ============================ ================================= ================== 20 28 99.8 33 GTACTCCCCACGGATGTGGGGATGATCC # Left flank : GCCAAGGATGAAATAATGGCGATCGGTGCTGTTAAACAGGTTCAAGGTAAGATTAGCGAGAGCTTTTACCAATTGATTCAGATTGATAAGTCAATTCCTAAAAACGTTGTGCGTCTAACTGGAATAACTTCTGAATTATTAAACGAAAAAGGAGTTAGTTTGGCCGTTGGCCTGCAGGGCCTTAAAACGTTTATTGGGGATATGCCGTTGATTGGGTATAACTTACACTTTGATGAAACTTTCCTGACAGCTAGTTTTAAAAGAATTGGATCGCTGGATCTAGGTAATCGAATGGTAGATCTGATGCCAGTGGTGAAGAAGGCAAATAAATTTTTAGATAATTATCGTTTGGAGACAGTGTTGGATGATTATGGTATCGAGAATAAAACACCTCATCAGGCGTTAGCTGACGCTCAGGCGACGTTGAACCTAGCAATCAAACTGAATGAAACAGGCGTTTTGAAAATTTGAGAATCGCGGTATGACTGCGTTTGTTTAGT # Right flank : CATGAATTAGCCAGGTAACTCTTGCCAAAGTACTCCCATGTCGGGATGTATTTTGTTCTCTCAAGCAGCCTAATAAAATCAGCAGGTAACTTAGATACCACAAAGGGATCTTCTGATGAGAACAGAATAGTTTTAGAAATAAACACAATTACCAGTAAGACTTCTGGATTAATGAAGAAGTTTTACTGGCTTTTTTGTATGTCATGGTAGATTGTCACATTTTACGAAACACGTGTAACTATAATTACGAATTCACTCCAAATTAAATGATGTGAAACATTGATAATGATGAATTGAGTAGTACTGACAGTATTTCATACAAACGCTGTAACAACAGTAAATAAAAGCTAAATTTGACAAAAAATTTCAATTCTTATTTTTTGAATTTAAATTAAATAAAACCCGTCTGAATCCCTGACGTGTCGCTAATTTGTTAATTTGTACTGCTGAAATATATATAAAGTAAGCGTTCACGGTGTTGATTAAAACAGTTAACGGTG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTCCCCACGGATGTGGGGATGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 42578-40596 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHOC01000006.1 Levilactobacillus huananensis strain 151-2B contig6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 42577 29 96.6 32 ............................C CACTAATACTGCTACCTCAACGACAACCAATA 42516 29 100.0 32 ............................. ATCCCGTTGAGGTAAGAACCCCCGTGGGTCAG 42455 29 96.6 32 ............................C GAGTCGCCACCTTAGATACGACAACTGATACA 42394 29 96.6 32 ............................C TAGCAGTCACTCAGCCGGTTAGTCAGTGCTTT 42333 29 96.6 32 ............................C TTTTGGGACGGCAAGCCGCCGCCAAAAGAAAA 42272 29 100.0 32 ............................. ATTTAGCGGCAAAGTTGTTGGGGACCCGCAGC 42211 29 100.0 32 ............................. TAGCGGCATACTGGGAAGAACTCACAGGCACT 42150 29 100.0 32 ............................. TTGCAGATGCAGACCCACGTCAGTTATCACAA 42089 29 96.6 32 ............................C TCACACCGTCGTCCAGTTCAACGGGCCAAAGT 42028 29 100.0 32 ............................. TATTGTCAGAACGATATTTACTTATTCACTAT 41967 29 96.6 32 ............................C ACCATCTTTACCGGCGGCGCCGGTTTCTCCCG 41906 29 96.6 32 ............................C CACTAGCTCTTTACACAATGGATTCGGTAATT 41845 29 100.0 32 ............................. TAACGCCGGCTGGTTATCCAAGCTGTCACCAC 41784 29 100.0 32 ............................. TACTGGGCGGCCATTAAAGAGTTGCCAAAGGA 41723 29 100.0 32 ............................. AACCCTGACCACTGCCAGTGATTGTGATTACC 41662 29 96.6 32 ............................C AAGGATAATGTGACGGTTAGCGGCGCGATGAT 41601 29 96.6 32 ............................C GTTAAAAACGACCCGTAATTACTTGACAAATT 41540 29 93.1 33 ......T.....................C TCGCATCAGTAGCCATCATCCTCGTCAGAATCA 41478 29 96.6 32 ............................C CGCTCCAAATGGCTACCAAGTAATGTTTATCC 41417 29 96.6 32 ............................C ACCAAGGAGACGGCGCTGTCACATATCGCTTT 41356 29 100.0 32 ............................. GACGACTACCACACGTCAATGCGTTACTATTT 41295 29 100.0 32 ............................. AAGTCAACTGGCTATGCGTCAGTGTAGCGCTG 41234 29 100.0 32 ............................. GACGCTGGGACGGCTGAGAAGGCCAACTTTGA 41173 29 96.6 32 ............................C GTTTCCATAGAGCGATGTATAATATTTGATTA 41112 29 96.6 32 ............................A CAGAAGAAAACGGCAAGGTACTGGATGTTATG 41051 29 100.0 32 ............................. GGCTAAGGTAATGGACCACGTATCATACGACC 40990 29 96.6 32 ............................C GGAACAATCGAAATTGATAGTTCAACCAGTTT 40929 29 100.0 32 ............................. GATTGCCATAAGTGGCATCAAAGGCTTTAGGT 40868 29 100.0 32 ............................. GGACGAGATGAAGTTGCGTGGCAGTTCTGATG 40807 29 100.0 32 ............................. CAAATGTTTAGTGTGTACGTGACCAGCTCGGC 40746 29 93.1 32 .............G..............C GATAATCAGTTAACCGGTCGACTTCCTAATTT 40685 29 100.0 32 ............................. GTAGTGGGCGACGAAATGGGATATAGCCGTTC 40624 29 89.7 0 .....................G....T.G | ========== ====== ====== ====== ============================= ================================= ================== 33 29 97.8 32 GTACTCCCCACGTATGTGGGGATGATCCT # Left flank : TGTTAGGGCTCCTAATTTAGTTTTTTAGCGTCATTGGGGCATTAGGCGCCTGGTAAATTCCGAGACATGAGGTGCCTGGTTTAAGCGTTAAAGGTGATGGGCGGACCATGTACTCGGATTTACTTCCAGCGGTGATTATATCATATTTTGGGGCGTGAATAACGGCTAGTGGGTGAGTGTTGGTAGGACAGTTCTAGATGGCCCATCGTAATCTAAAAAAATCTTGTTTAACTAAATCTGTGACAAGCACTCAAAAACTAGAATTCGCTAAAATTTTTCTGAGTGGTTACTTGGGTTATAGAGATGTGGTTGAAATTTACTATGGGGGTTCGAAAAATGCTACGTTTATTGTGATAGCTTAGCGTTCACTAGGAATTGGCATGTTGGCAGTTGAAGCCAGTTAGGTTATGCTATAGAGGTAAGTGGATTGTGAAATGCAAACCAACTAAAATAGGCTAGTTTGCAAATCTGAGATGCTGATATATCAAGGTTCTTTTAGT # Right flank : AAGTATCTTAATAGCACAGGTTAAAAAATAATATCATTGTATGATTGATAAGGACGTGTAGCTGTGATTGAGGGCCTGTTCATGTTGTTCATTGCCGGGTGTATGCTTTATTTAGCATTTGGTCTATTGTGGTCAACTTTTTTCTAGTCATGAGACATCAAAGGCTCTTTATTAACGAGCTACCAGACATAGAAAACTATGATAAAATAAATGAATACGATTACAAAAATAACAAAGATTAGTAAAAGGCATCAAATATTTTAAGTAATGTTATTTACTATTTTATAAGTCATCTATATTGAATTGGGGAGCGTTGATCTGTATATTCGAGGATATAACGTTCTTGAAATTCCGATTGTGAACCTTGAGGTAATGTGCATAGTTACATATAACACTTAATTGACAAAGGTTAAGAGGCTGTACATATGGGAATGAAAATATCCGATCAAGCAGCAGTGTTGTGGGCGAAGAAACGCAGTGAGGAAGGGTACCAGTATTGG # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.72, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTACTCCCCACGTATGTGGGGATGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //