Array 1 13926-14820 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQWW01000017.1 Lactobacillus gasseri strain JG141 Seq14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 13926 36 100.0 30 .................................... TGAAGCAACGTCCAGAGACCAATATAGCCG 13992 36 100.0 30 .................................... CCAAAATCTATTTTTGGTGTCCAACTTGGC 14058 36 100.0 30 .................................... CCTAGAGTACGTGGCTTATAGAAGGAAGGT 14124 36 100.0 30 .................................... TTTGTTATAGATATTTTGTGAATTCCAGTC 14190 36 100.0 30 .................................... ACGATTATGGAAAGCTTAAAGAAGAGACTG 14256 36 100.0 30 .................................... GCAATATCAATGTCGTCTTGCGCTTCGTCA 14322 36 100.0 30 .................................... TCATAAGATATATGAATATATAAACTTTAA 14388 36 100.0 30 .................................... CCAAATATTTCCGGATCACAAACCCGCTGA 14454 36 100.0 30 .................................... TATCGCATTATTCATCGTATCCATACCCGT 14520 36 100.0 30 .................................... TATCGTCGGTACGAGTTGTAATGCTGAATA 14586 36 100.0 30 .................................... TTTGCATAATTAATGAAATCAGCGACAACA 14652 36 97.2 30 ............................T....... CCTTCAACATTCCTAAAGATGATTGGATGG 14718 36 97.2 30 ............................T....... AGTTAATCAAAGAAGGCGGACAAAAAGGCG 14784 35 91.7 0 ..........................A.A....-.. | TT [14812] ========== ====== ====== ====== ==================================== ============================== ================== 14 36 99.0 30 GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC # Left flank : AATCAAAATATTTTTGACAAGTATATGCCCGTAATTATAAAAGAATACATTGAAGTGCTTAATGAAGCAGATCGTAATGAAATATTAAAAACGTACCATAAACTAGAAGGGATAATTCAAGATTCGTTGCTACTTGAAGATCTACCATTAGAACTTGAATTTAATGAAGACTTGAAGAAATTTTTAAAGTTAGAAAATCTACATTTAGATACTAAGTTTTTAGAAGAACCATATGCTATAATTGAATCGATCTTAAAAATACATCAAAATTATAATCTCCATTCTATACCTGTTGCTTGTAATGTAGCTCATTACTTAAATTTAGCTCAGGTAGGGATGTTAAATGATCTGTTAAAAGAAATGAAGTTGAAATTAATTTTAATAGAATTCACATCTGCGGATTTTCTGTTTTTTCCAAAAGATGTTGATTATTTCTACATTGATCAAGATCTTGTTGATTGGTACTAACTATCTGATTAAAAACTGATTATAAAATTTCG # Right flank : CGTAATTACACTACTGGTCCATTGCTTTTGCAATGTGCCTTTTTTATTATCTTCCAAACCGTTTTTCACCCTACAGTGCAAAAGTCTATTTTAAATGTAAGTGCCTATTTTATACCATATAAGTGTCAAGAAAAATAATATTAATGGATAATTTAAAAATGACTAAGAATGTTTTTTTGGTATGTGGTTCAGGTGCAGCATCAGATTTTATGGCTGCTCACATGAGAAAAACATCAAAGAAAGTTGGTTTAGATTATAAAATTCAAGTTCGCAGCGAAGCAGAATTAGGTGACTATGCAGATCAAATTGCTGCCTTAATGTTGGGTTTCTTACTTAAAGACGGAGTTTGGTGCGATTAAATTACAAGTACTTGACAAGGTAAAGTAATTTTAATGAAACTAGATTACTATTCAATTTCCATTTAATTTTATGGATTACATGAAATTAGACAAGCAAAGAATCATCGCGGATCTTTTCCTCAGGGCGCGGTATGTTTATTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAGATCAATAAGGCTTAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGATGGTTGTTAGATCAATAAGGTTTAGATC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.90,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //