Array 1 14190-14952 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JURA01000031.1 Neisseria meningitidis strain 840_NMEN 329_25992_550002_15+,58_, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     14190	    36	  97.2	    30	.C..................................	CCACCGCCTGAATTTCCGCCACCACCCCCA 	
     14256	    36	 100.0	    30	....................................	TGAATGGGTGTTGATGGGGCGCGTGAAACC 	
     14322	    36	 100.0	    30	....................................	GATGAATCTTGGATTATGTTAACAGCAACA 	
     14388	    36	 100.0	    30	....................................	AAAAGATAGCAGCCAAGTACAACAGATTAA 	
     14454	    36	 100.0	    30	....................................	AAATAGATGATGTTTCAGCAGGCATATGTG 	
     14520	    36	 100.0	    30	....................................	ATGACTTAGAAGGTATCGAAGAAGAAGTAC 	
     14586	    36	 100.0	    30	....................................	TGGCAAGACATGGTGGCGAGAATGTGGTTT 	
     14652	    36	 100.0	    30	....................................	TATGGCGCGTTTTATATACCCTTGCCTAGT 	
     14718	    36	 100.0	    31	....................................	CTTCAGTTTCCCTTTAAAATCAACAACTTAA	
     14785	    36	 100.0	    30	....................................	AATGCGAAAGTAGGTTAGATAAAATGATGA 	
     14851	    36	 100.0	    30	....................................	TGGGAATGAATTAAACAGAGGAATACAAAA 	
     14917	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        12	    36	  99.8	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                               	       

# Left flank :   GTTTGAAGATTAAAGGATAATGACATGCGTCATCGTAATGGCAACCGCAAATTAAACCGTACTAGCAGCCACCGTGCTGCGATGCTGCGCAATATGGCGAATTCCTTGTTGACTCACGAAACCATCGTGACAACTTTGCCTAAAGCAAAAGAATTGCGCCGCGTAGTTGAGCCCTTGATTACCTTGGGTAAAAAACCTTCTTTGGCAAACCGTCGTTTGGCTTTTGACCGCACTCGCGATCGTGATGTTGTAGTTAAATTGTTTGACGAATTGGGTCCACGCTTTGCTGCTCGTAACGGCGGCTATGTTCGTGTACTGAAATACGGTTTCCGTAAAGGCGACAATGCTCCTTTGGCATTGGTTGAATTGGTTGATAAAGCAGCTGATTCTGCTGAATAAGCAAATTAATATGAAAGCACTACCTGTTTAGGTGGTGCTTTTTTATTTGGATAGACTCTTTATCATTGCGCAGAGTTACAATCCGCCTCGTGTCAATAACT
# Right flank :  TACTTCAACGGGAAACCCTTATTCTATAGGGGTTTCCCGTTTTATTTTGTCTAAAAAAGCAGCCTTAAAATAATAATAGTTGGTCGGAATTTACCCTTTTTTCTTGGATTTTCAGCTCTCCCAACAGCAGTTTCATGGTGGCATATTGCTTTTCTGTTACTTCCAAACAGCGGATTGAGCCTTCTTGCGGTAGGTTTGCACATAGCCTATTGTGGTGTTTTTGCAACGAATCTCGACCTTTGACAATACGGCTGTATACGGAAAGTTGGAGCATTTGGTATCCATCTTTTAATAGGAACTGGCGGAATTGATTGGCGGCTTTGCGCTTGGCCGCCGTGGTAACAGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTAGCCTCACTCATATTGGTATTCTTTCAATGGCAAGATTTCAGGCAGTTTCAGCTGTTTAGCGTTTTTGTTAGTTACGCTGGCTTGAAATGAAGAAATCATTTTGTCGATGGCAGCCAAGGT

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         F [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.40,-0.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-63.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.41   Confidence: HIGH] 

# Array family : NA
//