Array 1 88691-87071 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCHW01000049.1 Streptococcus thermophilus strain UC8547 gpvb_seq54, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 88690 36 100.0 30 .................................... GTGAAATGCTTTTTCTAATTCATGTGGTCT 88624 36 100.0 30 .................................... TTAAGTGGTATTATTATATTATCGAAGAAG 88558 36 100.0 30 .................................... GCAACAGTAAAACGTTGCAAACGAAAACTT 88492 36 100.0 30 .................................... TTCCCGGCGTATATACTGGCTCGATTGTTT 88426 36 100.0 30 .................................... CAATAGTTACCCGAGTACCATCTTCAAGCA 88360 36 100.0 30 .................................... AACACAGCAAGACAAGAGGATGATGCTATG 88294 36 100.0 30 .................................... AGAAGTCACTCGTGAGAAACACTACTCAAA 88228 36 100.0 30 .................................... CTTTTTTGGCAATCCAACCTGAGAGCCAAG 88162 36 100.0 30 .................................... TGTGACCAACTTCCACCAGCTTGGCCATTG 88096 36 100.0 30 .................................... TGCAAACAAAACAGTGCGATCGCTTGCAAG 88030 36 100.0 30 .................................... AATTAAGGGCATAGAAAGGGAGACAACATG 87964 36 100.0 30 .................................... CGATATTTAAAATCATTTTCATAACTTCAT 87898 36 100.0 30 .................................... GCAGTATCAGCAAGCAAGCTGTTAGTTACT 87832 36 100.0 30 .................................... ATAAACTATGAAATTTTATAATTTTTAAGA 87766 36 100.0 30 .................................... TGGAAACTAAGAAATGCAATAGAGTGGAAG 87700 36 100.0 30 .................................... AAATCTCGTAGTTAGTACAGTAGGTTTCAA 87634 36 100.0 30 .................................... ATAACTGAAGGATAGGAGCTTGTAAAGTCT 87568 36 100.0 30 .................................... TAATGCTACATCTCAAAGGATGATCCCAGA 87502 36 100.0 30 .................................... GAAAAAGCATCCATGATAGTGCTTAGACCT 87436 36 100.0 30 .................................... TGGAAACTAAGAAATGCAATAGAGTGGAAG 87370 36 100.0 30 .................................... AAGTAGTTGATGACCTCTACAATGGTTTAT 87304 36 100.0 30 .................................... ACCTAGAAGCATTTGAGCGTATATTGATTG 87238 36 100.0 30 .................................... AATTTTGCCCCTTCTTTGCCCCTTGACTAG 87172 36 100.0 30 .................................... ACCATTAGCAATCATTTGTGCCCATTGAGT 87106 36 94.4 0 ..................................GT | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.8 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : ATTGATGGATTTATCTCAGAAGAATCTTATACTATTTTTTATAGGCAAATCTGTCATCTGGTCAAGAAGTATCCAAATCTAACCTTTATTTTGTTTCCTAGTGACCAAGGCTATTTAAAAATTGATGAAGAAAATAGTAGGTTCGTCAATATTTTATCTGACCAGGTGGAGCATTTGTATGATGTTGAGTTTATGTATGAAAGGGTAATGAAATATTATCCAAGTAATGATTTTCCGACGAGAGAAGGTTTTAGGATGTCTTTAGAAACTGTGACACCTTATTTATTGACAAAAATGCTGAGACAACCTAGTCTCTCACTTGTTGATTCAGTAATATTGAATATCCTAAATCAGCTGTTTCATTTTAGTTACCGTATAAGATATTCTCAGACACCTGATAAGGAACTATTACATAAATTTTTAGAAAGTAAGGATTGACAAGGACAGTTATTGATTTTATAATCACTATGTGGGTATAAAAACGTCAAAATTTCATTTGA # Right flank : TTGATTCAACATAAAAAGCCAGTTCAATTGAACTTGGCTTTTTAAAATACACGATAAACATAAGGATTGTCAGGCTGACTAACCTCTTTAATCTCAGTCAAATTAAGGATAGGGAGGCTCTGTTTAAGGTTTTGATAATAATTCACAGTGATGGTACCAGTGACTGTTACCCAGGTATTATCCTTAAAGGTTTGGTCGCTTCCTGTCGTTGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATACCGAAACGGAAGATGAACTGATATCCCATGGTCTGTGGATCATTGTAAACAAAGCCGGTATAGGTGACCTTCTTGCCCACGAAATCGTTTGGATAGAGATAGATGAGCTCCATGACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTCTCACGTCCCTTGTACTTGGCTAGCTCCTTGGTCATTTCCTTCTCATAAGCTGAGGAGGTGAAGTAGGAGCTGGTGTCCGGCCTTAAGTACTGGGTAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //