Array 1 6553-6330 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDQ010000035.1 Clostridium estertheticum strain CF010 contig00035, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 6552 29 100.0 37 ............................. GACATTTTGTCCAGGGGTTGCCATCACAACTTTGTTA 6486 29 100.0 38 ............................. GAAATGTTATGAATTTACAACAATAACTTGCAATACTA 6419 29 89.7 32 .......................GG.C.. AACAATTAAGGTAGGACGTAGTTATATTAAGG 6358 29 86.2 0 .................T....T...C.T | ========== ====== ====== ====== ============================= ====================================== ================== 4 29 94.0 36 GTTTAATAAGTACTATGGTTAGATATAAA # Left flank : AATATATTACTGTGGATGTCACATAGAGTAAAGAACGTGGGAAAAGAAAGATTCTTGGTATAACTACATCTGAATCAATATATATAAATACTATAAAATAATTTATTAAATATTAAAATGAAGAATGTAGATATACCAATGTTTATTACTAGTTTAATAAGTACTATGGTTAGATATAAAGATTTGGGGTATTTATATTTTTGTTGCAAATCCTGATGTTTAATAAATACTATGCTTAGATATAAAAAATTGATAATGGTAAATATAGTTCATTAAAAGAAGATTTATCTAAAAGAATTCCGAGAAGATTATATTCACATAGGAGCAATTAAAAGTGCTTTTGATGGATATTTAAAACACTTAAAAGAAACAGTATAGTCAGAAATTGGGGAAATTAAGATTGTTGGTATAACTACATCTGAATCAATATATACAATTATCTTAAAATGATTTATTGAATATCAAAATGAAGAATGTAAATATATTAATGTTTATTGTAG # Right flank : CAGGATTTTAGAATTAGCTATATCTGGATTGGTGTATCTAAAAGAATTGATAATGACAAATACAACACATTAAAAGAAGATTTATCTAAAGAATTTGAAGAAGATTACATTCACACAGGAACAATTAAAAGTGCCTTTGATGGATATTTAGGACATTTAAAAGAAACAGTATAGTCAAAATTATTTCTGTCGATGTCACATAGCGTAAATAATGAGGGGCGTCGACAGAAAGTGGAAAAGGCAAGATTGTTGGGATAACTACTTCTTAATCAATATATATAAATACTAAAAAATAATTTATTAAATATTAAAATGAAGAATGTAGATATATCAATGTTTATTGTGGTTTAATAAGTACTATTGTTAGATATAAAAAATAGTAAAAATCAGTAAATCAATATACTAAAAAGTATTTAATAAGTTCTATGGTTAGATATAAAGTGCATAAGATCCAAAAATTGGCGACATGAACACGCACGTTTAATAAGTACTATGGTTAG # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATAAGTACTATGGTTAGATATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 7417-7190 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHLDQ010000035.1 Clostridium estertheticum strain CF010 contig00035, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 7416 29 100.0 37 ............................. GCGCGAGTTCCAAAGGAAAGATAGGTTAAATTGGATA 7350 29 100.0 37 ............................. GACGGGCTACCACCTCATAAGTCTTGACAATTCCCTT 7284 29 96.6 37 .................A........... TAAAACTACACAGATTTATGCGGGAACTTCAATAGAA 7218 29 89.7 0 .....C...T............T...... | ========== ====== ====== ====== ============================= ===================================== ================== 4 29 96.6 37 GTTTAATAAGTACTATGGTTAGATATAAA # Left flank : ATGGTAGATATAAATACAGACCTATCTTGATAGCTAGCATCTTCTTTTAAAGTTTAATAAGTACTATGACTAGATATAAAATTTCCTGTTAGATATCCAGCTTTCATTGCCTGTTTTGTTTAATAAGTACGATGAGATATAAAGTATGATTTTGAGAATGAACTGAAGAAAAGATTAACAGTTTAATAAGCGCTATATTTAGTTATAAAGATTTGGGACAAATATAATACATTAAAAGTAGATTTAACTAACGAATTTGAAGAAGATTATATTCACACAGGAACAATTAAAAATGCTTTTGATGGGTATTTAGGACATTTAAAAGAGACAGTATAGTCAGAATTATATTTCTGTCGATGGCACATAGTGTAAAGAACGCAGGAGGTCGACAGAAAGTGGGGAAAACAAGATTGTTGGTATAACTACATCTGAACCAATATATGTATAAATACTATAAAATATTGAAATGAAGAATGTAGATATATCAATGTTTATTGTAG # Right flank : GGTTTGATAATGATAAATATAGTACATTAAAAGAAGATTTATCTAACGAATTTGAAGATGATTGTTATTCACATATGAACAATTAAAAATGCTTTTGATGGGTATTTAGGACATTTAAAAGAAACAGTATAGTCATAAATATATTACTGTGGATGTCACATAGAGTAAAGAACGTGGGAAAAGAAAGATTCTTGGTATAACTACATCTGAATCAATATATATAAATACTATAAAATAATTTATTAAATATTAAAATGAAGAATGTAGATATACCAATGTTTATTACTAGTTTAATAAGTACTATGGTTAGATATAAAGATTTGGGGTATTTATATTTTTGTTGCAAATCCTGATGTTTAATAAATACTATGCTTAGATATAAAAAATTGATAATGGTAAATATAGTTCATTAAAAGAAGATTTATCTAAAAGAATTCCGAGAAGATTATATTCACATAGGAGCAATTAAAAGTGCTTTTGATGGATATTTAAAACACTTA # Questionable array : NO Score: 2.69 # Score Detail : 1:0, 2:0, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAATAAGTACTATGGTTAGATATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //