Array 1 321309-321542 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASHW010000003.1 Streptococcus anginosus strain K20 scaf_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 321309 36 100.0 30 .................................... ATCTCTTGCAGATGAGATAGCTTTGCAAGA 321375 36 100.0 30 .................................... TTTGATTCCAGACCCTACAACAGCTGGTCT 321441 36 100.0 30 .................................... AGCCAAGTGGTCGAAAAAGACGTCACTTTT 321507 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 4 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ACAGTTGAATGAAAAGTCTGAAGTGAAATCTATGTTAGAAAAATTAGTTGCAACTATTACAGAACTAATTGCTTTTGAATGTTTAGAAAACGAGCTGGATTTAGAGTATGATGAAATAACAATTTTGGAATTGATTGATGCTTTAGGTGTAAAAATTGAAACACTAAGTGACACTGTTTTTGAGAAAAGTTTAGAGATTGTTCAGGTGTTTAAATATCTTTCTAAAAAGAAACTGCTTGTCTTTGTGAATGTATCATGTTATCTGTCTGAACATGAACTAGCTAAATTGGTAGAATATATTCAACTTCATAATATAAATGTACTGTTTGTTGAACCAAGAAAAGTATACGACTTCCCTCAATATGTAGTGGATGAGGACTATTTCTTATCTTGTGAGAATATGATATAATATTAGTAAATATAAGGAATCATTTGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAG # Right flank : CATCTCTTGCAGATGAGATAGCTTTGCAAGAGTTTTAGAGCTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGCTGTTTCGAATGGTTCCAAAACCTGCGCCGATTAACCAACTCAAACAAGATAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTGCCATCTGTAATCAACTTCTTATCTTCCGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTGCCGCGTATTGTATCATCACTCGCACGGAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTATACGATTAGACCATTTAGCACCTTTAAAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGGGCAAAATGATTGACGGTGTGTTTGTGAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACACG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 321739-323094 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASHW010000003.1 Streptococcus anginosus strain K20 scaf_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 321739 36 100.0 30 .................................... TTGCCATCTGTAATCAACTTCTTATCTTCC 321805 36 100.0 30 .................................... TGCCGCGTATTGTATCATCACTCGCACGGA 321871 36 100.0 30 .................................... TATACGATTAGACCATTTAGCACCTTTAAA 321937 36 100.0 30 .................................... AGGGCAAAATGATTGACGGTGTGTTTGTGA 322003 36 100.0 30 .................................... ACGGTTGAAAAAATTGAAAGATTATTATCT 322069 36 100.0 30 .................................... TAAGAAGTCTATGGATAGAGCTAGTGGTTC 322135 36 100.0 30 .................................... TTGCCATCTGTAATCAACTTCTTATCTTCC 322201 36 100.0 30 .................................... TGCCGCGTATTGTATCATCACTCGCACGGA 322267 36 100.0 30 .................................... TATACGATTAGACCATTTAGCACCTTTAAA 322333 36 100.0 30 .................................... AGGGCAAAATGATTGACGGTGTGTTTGTGA 322399 36 100.0 30 .................................... ACGGTTGAAAAAATTGAAAGATTATTATCT 322465 36 100.0 30 .................................... TAAGAAGTCTATGGATAGAGCTAGTGGTTC 322531 36 100.0 30 .................................... ATGTTCACGTGGTATCATATAAATATCAAC 322597 36 100.0 30 .................................... TCCAGTTTCCTGCTCCACCTCCTTCTGTTA 322663 36 100.0 30 .................................... TAGTCTAGTCAATTCAAACGCCAACTTGCA 322729 36 100.0 30 .................................... TAAATTGTGTAGTTTTGTTTCTAATTCATC 322795 36 100.0 30 .................................... TGAAAATTTCGGAAAGTTATGAAAATTTAA 322861 36 100.0 30 .................................... TTTAAAAGATTTAGCAAAAAAATATGAGTG 322927 36 100.0 30 .................................... TTCAATCGCAACTGGTAACATCAATATCTT 322993 36 100.0 30 .................................... AGACGCACTTATGGAAGCCGTAAAAATGCA 323059 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : ATTTGAGCTGAAGTCTAGCTGGGACGAATGGCGCGATTACGAAATTTCGAGACAAAAATTGGTCCACGAGGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATCTCTTGCAGATGAGATAGCTTTGCAAGAGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACTTTGATTCCAGACCCTACAACAGCTGGTCTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACAGCCAAGTGGTCGAAAAAGACGTCACTTTTGTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAACATCTCTTGCAGATGAGATAGCTTTGCAAGAGTTTTAGAGCTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGCTGTTTCGAATGGTTCCAAAACCTGCGCCGATTAACCAACTCAAACAAGATA # Right flank : CACAATACATTTTAATCATAGGGCTTGCAAATTTTTCCAATCGTGTTATAATACTTTTTAGAGACATATCACCTACAGGAAATCTTTCAGAGAGCGTGTGGAGCTGGGAATCACGCAGAGGATGTAGCTGGGACTACTCGATTTATTTTTATGCAAACATAAAACGGTGGCTACGTTAGAGCCAATCAGAGGTGTCAACAAACTTTTTTGTTGTACATGAATGAAGGTGGAACCACGTTGCGACGTCCTTTTAGGATTGCCGCTTTTTATTTTGTCGGAAGGAGGAAGAGTTATGCTCTATATGATTGGTGGATCGCCTTGCAGTGGGAAGTCAACAATTGCCTCCCTTCTTACTCAGCAGTATGGGCTGCTTCATATCAAGTTAGATGATTTGACAGACCAGATGATGGATCAAGCAAGAGCGAACGCAAAGCCGATTTCCCTTCTGAGACAGGACAGAAGTCCGGATCAAATCTGGCTGAGACATCCAGAGGAGATGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //