Array 1 78469-79294 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVK01000008.1 Dorea sp. OM02-2LB OM02-2LB.Scaf8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ================================== ================== 78469 33 97.0 32 T................................ ATTAAAAACCACCTCCTACGCTGGGATCCAAC 78534 33 97.0 33 G................................ TAAGCCCTTACTATGCATTTGGAGCCTATATGA 78600 33 97.0 34 T................................ CTTTGAGGATATTGCCGATGCAATGGCAGACATC 78667 33 97.0 33 C................................ TCCGATGATGATTTGAGGATACTATGGAATCAC 78733 33 100.0 34 ................................. ATGGAAGTGTTGCGGAGAATGCAGGAACATCTAA 78800 33 100.0 34 ................................. TATCTTTAAAAAGCTCTTTGTCCATGCTCCGTAT 78867 33 97.0 32 G................................ ATCAATATCTACAGAAAGGCTTACAAAAACCT 78932 33 97.0 33 C................................ AGAATTAAAACACCATCCTGTACTGTTACACTA 78998 33 97.0 34 T................................ CCGATGTACTTCTGGTACCAATACTGGCCGGAAT 79065 33 100.0 34 ................................. TTCCAAGGATTTAATTGTATTTGGTAAGGGTTCC 79132 33 100.0 32 ................................. GTTGATATCCTTAAAGAGTTTATCGCCGATAC 79197 33 97.0 32 C................................ TTTGATGTTGCAATCGGAAATGTACCGTTTGG 79262 33 90.9 0 ...T........T............G....... | ========== ====== ====== ====== ================================= ================================== ================== 13 33 97.5 33 AGTCGCTTCCCTCGCGGAAGCGTGGATTGAAAT # Left flank : TCCGGTATTTCTTTGGAAATGAGGTGAAAAAATGTTGCTGCTAATTACGTATGATGTAAATACAGAAACTGAAGCCGGAAAAAAACGCCTTAGAAAAGTTGCAAAACAATGCGAAAACTATGGAAGAAGAGTACAAAATTCTGTGTTCGAATGCATTGTGGATCAGGCACAAAGTGTGATGCTAAAATCAATATTAACAGATATTATTGATGATAAGGTGGATAGTTTGCGCTTCTATTATCTTGGAAATAATTATAAAACCAAAGTGGAACATATTGGGATAGAACGTGGAATCGCGGTCGATCAACCTTTGTTTTTATAATTTGCAGGTGCGAGTGTGAAGCGTACATAAAATTACCGGGAGACTCGCACCGGAAAAAATAAACAAAATTTGAGTGCACTTTTACATATACCGGATATTTAAGAGCGTATGTAAAAGTAAATTCAGATATATTTAGGCATATTTCATAAAATAAAGAAAGTAGTTTGTGAAATATTGC # Right flank : TAACAGTATCCGACCTCGTGAATACGATGAAAGCGTAGAATGAAATTATGTACAGAACAAACATTCGATTTTGTTCTGTACTTTTTATATTAGGAATGATATACTGGACAGGAAACAATACTAAGAATATAACAATTTCCGATATTATCGATAAAACAGATTCAATCAGGAGAAATCATATGGATCATTTTGAATTAGTGTCAAAATACAGCCCTACCGGCGATCAGCCCCAGGCAATCGCGGAACTGGTAGCGGGATTCAAAGAGGGAAATCAGTGTCAGACCTTACTTGGTGTTACAGGTTCCGGTAAGACTTTCACCATGGCAAATGTGATTCAGGAGCTGAATAAACCGACTCTGATCATCGCCCACAATAAGACATTGGCGGCTCAGTTATACAGTGAATTTAAGGAATTTTTTCCGAACAATAGTGTGGAGTACTTCATTTCCTACTATGATTATTACCAACCGGAGGCTTACGTCCCTTCATCCGATACCTAT # Questionable array : NO Score: 8.63 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.49, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTCGCTTCCCTCGCGGAAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CGTCGCCTCCCTCGCGGAGGCGTGGATTGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 87431-84830 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSVK01000004.1 Dorea sp. OM02-2LB OM02-2LB.Scaf4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 87430 36 100.0 30 .................................... TTTTTAGCAGGTAAGATTTTGGAGAATATC 87364 36 100.0 30 .................................... TATCACACCCGCGCCAACTTTGCAAGCGCA 87298 36 100.0 30 .................................... ACCCTTGTATAGATACTTCTTTATCATACA 87232 36 100.0 30 .................................... TCAAGTCGTTACTCAGCCGGAACTACTTTC 87166 36 100.0 30 .................................... CGTAATGGTATCGTTACATCAATATCGGTA 87100 36 100.0 30 .................................... TCAGTTTGCAACCGTGGCACAGTTGGGACT 87034 36 100.0 30 .................................... ATGGAATAGATAAAGTTATTATTCAGGTTG 86968 36 100.0 30 .................................... CGATCTTTGCCAATGCAATCGATGTGCTCA 86902 36 100.0 30 .................................... TAAGACATTGTTATGAACGCCCTTCTGAAA 86836 36 100.0 30 .................................... GTGATTGCCTCGTCTGCTTCACACCGAGTG 86770 36 100.0 30 .................................... TTGCACAAGTTGGCCGGGTTGCGCTCACCC 86704 36 100.0 30 .................................... TTTGACCATGATAGATCCGGTTGGAATGTC 86638 36 100.0 30 .................................... TGAGTTCATGGTTATTAATAAACAAACAAA 86572 36 100.0 29 .................................... AGGTTCTGACCGCCAAGAGCTGAACCGTC 86507 36 100.0 30 .................................... TTGTTAGCCAGGGTTATACACAAGAAGAAG 86441 36 100.0 29 .................................... TTAGCAAGTTTCAATCCACACTGGGTATA 86376 36 100.0 30 .................................... AATGTTGGTTCAACGTTGATGATAGCAGAA 86310 36 100.0 30 .................................... AAAACACTGGATCTCGAATACAATCCGATC 86244 36 100.0 30 .................................... CACTGGAAAATGCGGTATCTAACTGCATGA 86178 36 100.0 30 .................................... AATCCAGTGCATGAATCGTGGGAATTGACT 86112 36 100.0 30 .................................... ACATCCAACAAATCATAAACGAAAAGGGTC 86046 36 100.0 30 .................................... AGAGATGTATCGGAGGGGTGAAACGGATGT 85980 36 100.0 30 .................................... TGGAACAGGAGAAAATGCAACTCTTACTGG 85914 36 100.0 30 .................................... TTAATCCGTCACAATATATCGTGTCCTGTA 85848 36 100.0 30 .................................... CCTAATCAAAATTGCATAATCGTCAACCGC 85782 36 100.0 29 .................................... TTGTAGGTTCTAGGGAGCGTCAAGACTCT 85717 36 100.0 30 .................................... TACTTCTGCGCCCTGCTCCGTTAATTGGAA 85651 36 100.0 29 .................................... TCAAAAGAATGCAGCAGAATTCGGAAGAG 85586 36 100.0 30 .................................... CGGTGCTTATATGATTCCAGCAAGTAAACA 85520 36 97.2 29 A................................... CAAGGGTTTAGTAAATTACTTGGTATTCC 85455 36 100.0 29 .................................... TGAACTGGGAGCAGCTCTGACAAACCTCG 85390 36 100.0 30 .................................... GAAGAAGAAGAGGAGTTTTTCAATGAATAG 85324 36 100.0 30 .................................... AGGAAAAAGCGAGGGAACAGATTGAAAAGA 85258 36 100.0 30 .................................... ACGGAAGAATACAATAGTATGGAAGATGTT 85192 36 100.0 30 .................................... TTCCGGAGATTCATCCGGAGGGTGTGATGT 85126 36 100.0 29 .................................... CATCCAGAACTGGTGAATTACCCTGGACC 85061 36 100.0 30 .................................... CCAACCTAAACACTCAACATCGTCATCCAT 84995 36 100.0 30 .................................... CTGCGTAGAGTCCATATCTTTTCTAATAGC 84929 36 100.0 30 .................................... TTTCACGTAATCATCATGGAAAAGATCGGA 84863 34 86.1 0 ..........................C-.-.A...T | ========== ====== ====== ====== ==================================== ============================== ================== 40 36 99.6 30 GTTTGAGAATGATGTAAAAATGTATGGTACTCAAAC # Left flank : CAGTGAATCGCTTGTACGAGAACTTGGCAGAGTTAGCAAAATCGGAATATATGTATAAACAGACGGCTGAAATGATGGGAAAACTTCAGGAATATTTATTAGAGTTGGAGCAATACATAGACGATACATTGGAATTCGATCAGATGATAGAGATGTCAGCTCTGTTAAAGGCCGTTGGAATGAAATATGAAGAAAGTGCAGAGAACCTACTGGAATATTTGGTGAAATATCTAAAAATAGTGATCAGAGGCTTGGAAATTAGACTGGTGATTTTTGTAAATATAAGGTCATTTTTTGATAAAACAGAAATACAGGAATTAAGACAGGAAATGTGTTATCAAGAAGTTGGATGTTTATTTATAGAAAATCATGAGATGTCTTGCCTGGAAGGGGTGAAAAGGTATATTATAGATAAAGATAAATGTGAAATTTATTGATTAGATAAACGGTTTGAGTACCTTATTTTATGCTGATGATGGCATGTTATTTTCAAATTTGAG # Right flank : GTTTCACTGTTTCATAAGGATCTGGGGCGATATAGTTTGAGCCTGAAAACATTTGGAAATCTTTCAAAATATTTTCAGAATCCCCTTCAATTACAGCTTTTTATTGCGCATGAAGATATTTCGGTACATACTATTGCATAGTGGAGTTAGCAAATGCTAACTTTATTCCGGGCGGTGAATAACCGGAATAAAAACAGAGGGGTTCGAAAGGACCCCTTTTTTAGGTGCGGTATATGTCTGGGTGTGGCGGTTGTGTGTGGGTAGTAAAACAGTTATAATGAGAATAAAATGTTAAATCCTGTAAATGGTAGATAAGCTAGAAATGGAGAAATCTTATGATCAACCGAGAAGATATGATGGAACTGACCCGTCGAATGAATGTTTCCCGGACATCTTTTACCCGTGTGGCGGGATGCTATGTGGATGAAGAAGGAGAATTTGACGGGAGTTTTAATACGAATTTTCTGAAGCTGTCGGCGCCGGAGCGGACGAAACAACTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATGATGTAAAAATGTATGGTACTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //