Array 1 1742-94 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQYI01000051.1 Weizmannia coagulans strain B4099 NODE_62, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================================================================================================================== ================== 1741 32 100.0 34 ................................ ATTACGATTACGCCATTTTCCCAACTAACCAGGT 1675 32 100.0 34 ................................ TTTAAAAATAGGGCGGGAGCTACCCGCCCTATAA 1609 32 100.0 34 ................................ CGTCTGCTCGATCGGATAAACGAACATGATTTCG 1543 32 100.0 35 ................................ TTTTGATAACAAAAGGTCATGGGCAGAGATACCGC 1476 32 100.0 34 ................................ ATGATGACGTGCTGTTTTATGTAGACAGGGTCGG 1410 32 100.0 32 ................................ TTTTCGGTAGCCGATACGTGTTATTTCGCCAA 1346 32 100.0 34 ................................ AGTTGATGAGAGAAAGCCTATAAAGGCTCTATGT 1280 32 100.0 34 ................................ CAATGAGCCGGGGCAAAAAAATACAGATAAAAAC 1214 32 100.0 33 ................................ ATATAATGGCATCAGCCCTAACATCATATCATC 1149 32 100.0 34 ................................ TATAAAATTGTTGAATTACAATAATCATCTTAAT 1083 32 100.0 34 ................................ CACAATATTGGAGACCAAATTGGCCACTGTAGCT 1017 32 100.0 34 ................................ TGATAATAGTAAAAAATACACCATTGAAAATAGT 951 32 100.0 36 ................................ AAAGTCCGATAATAAAACAGTGTTTAAGTATTCGCT 883 32 100.0 35 ................................ GGATTGACAGCGGATGCCACTTTCACAGTTACAAC 816 32 100.0 34 ................................ GCTAAGTAAAGAACGCTTTGGCAATGGAATTAAT 750 32 100.0 33 ................................ CTGCAAACATGCCTTAATATAGGTGTGCCGTTT 685 32 100.0 34 ................................ AGAATGCGTCTGAAGGCTCTTTTTTCCTTTTTTA 619 32 100.0 34 ................................ AGCGGCTTTCCGGGCTTTGATGGCATCATCAAGC 553 32 100.0 33 ................................ TTTTATCATAAATCATTTAATATACACCCCTTG 488 32 100.0 34 ................................ ATGCCATGCCATTTTTATTCCTCCTAATTTTTTA 422 32 100.0 34 ................................ GCAAAACGCGCCCTTTCGCAAACTGCTCGCTTGT 356 32 96.9 34 ..............................G. CGGAAAAACAGGAAAAAGAAATTGTTGAATGGAC 290 32 87.5 132 ...........TA........A....G..... CAGGAAGTCATGTAAACTATTTTTTGCTTATTGTCGATTCCTATACGAGGGTATGAATTGCGCAAAAGTCGCTCTCTAAACGGGGAACGGCAAAAACGGAGTCGCCCCTTTGTGATGTGGAAATATACAAAA 126 32 68.8 0 ..........GTAC.....T...AT.AT...A | T [108] ========== ====== ====== ====== ================================ ==================================================================================================================================== ================== 24 32 98.1 38 GTCGCTCCCTACGTGGGGGCGTGGATTGAAAT # Left flank : TGAGTATCCTCCCTTTCTGTGGAAGTAGGTGGAAAAATTTGCTTGTTGTCATTACTTATGATGTAAGCACTTTGACCGGTGCAGGGCAGAAAAGGCTGAGAAAAGTGGCGAAAGTCTGTCAAAACTATGGCCAGCGTGTTCAGAATTCTGTTTTTGAATGCTTCGTTGATGCAACTCAATTTGCATCTTTGAAGATTGAACTGTCTAATATTATTGACCCGGACGAAGATAGCCTGAGATTTTATCAGTTGGGGAACAACTACAGAAATAAAGTAATGCATATCGGGGCAAAACCATCTTTGGATTTAGAGGACCCATTGATCTTTTAGAGTGCGAAGGTGTAGCGCACACGATTTTTCCTGTGGGTTCGCACCATAATATTAACCAATATTTTACATATATTGGTCTTGCTTGGTAAATAGTTCTTTGTTTTATCAGAGGAAATAGCGAAATTTGGTTGTTTTGAAAACACACATTCGCATTTTTTGCCAAATTCCGCT # Right flank : ATTTAAAAAGCTATCCCCAGATTTAAGGTGGACTCCATCGTCAAGACACAAATTTAAAATTTTTAAGGTGGGTCAGAATCTGAAAAACAGATAC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACGTGGGGGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCTACGCGGGGGCGTGGATCGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.90,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //