Array 1 992831-998746 **** Predicted by CRISPRDetect 2.4 *** >NC_020449.1 Candidatus Cloacimonas acidaminovorans str. Evry, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =============================================== ================== 992831 37 100.0 37 ..................................... ATAAAGGTTCATCTTCATCAGCAGTGTCAGAATCAGA 992905 37 100.0 42 ..................................... TTAAGCTACATCAGGAGGAAGCATTCCCTGATGTAGGTTATG 992984 37 100.0 39 ..................................... ATTCCGGGCTTTTTCCGAGTCAGGAACAATATTATCTGC 993060 37 100.0 38 ..................................... TAAAGTCCCAGTCTGAAGATAATATTGTGTTTATAGCC 993135 37 100.0 36 ..................................... GTAAATACTAATCCTATCAGTTTCATTTTTCCTCCT 993208 37 100.0 36 ..................................... AGGAATAGTCATTTTTCCACGAAGCACTACTGCGAT 993281 37 100.0 42 ..................................... AAAAAAGCACTCCAAACAGCTTGGAGAGGTTTTGTTTTGAGA 993360 37 100.0 37 ..................................... TTTAGATTGTGCATTGAATCGAAGGCACCATCCTTAT 993434 37 100.0 43 ..................................... TATCCCCAATTATCTTTGTTTTCACCAAAGATTCTGGAAATTA 993514 37 100.0 35 ..................................... GTGAACGCTTTTTTGGTCAAGCAAGGTGTTTTTAA 993586 37 100.0 42 ..................................... TTTAAAGCTTTAAACACTTTGAATTTGTTAGCTAAATCCATT 993665 37 100.0 39 ..................................... TTTTTGTTGTAGAAATATTCGAAAGCTTCATAGTCTTCC 993741 37 100.0 41 ..................................... GACCACGAATTGCCCCGATATTTCGTTTTAGCAATACGATC 993819 37 100.0 40 ..................................... TCAAAATATGGACAAGAACGATAATCGTGATAACAGATAT 993896 37 100.0 40 ..................................... TATATTTCGGAGATTGACTTCTTATCTACCTCGTATTTTA 993973 37 100.0 43 ..................................... AAACACGATGAACAATACCATCCCGATGGCGGTTAATATTTGT 994053 37 100.0 37 ..................................... ATGGAAGTGAAGCCTATGGGTTCATAGATTGCCCAAT 994127 37 100.0 40 ..................................... ATTAGGATACATAGCGGAAAAAACTGGCACAGGATCTGCG 994204 37 100.0 42 ..................................... CAATTGAGGCTCCTCATCCCGGTTCATGGTTCTGTACAATCT 994283 37 100.0 42 ..................................... GATCGCTCTGAACCCAGATTTCAGCCTTCACATATGACCCAT 994362 37 100.0 37 ..................................... GATCGCTCTGAACCCAGATTTCAGCCTTCACATATGA 994436 37 100.0 41 ..................................... CGTCTTCCTGGTAATACGAGATCACCAGGAAGGGCTTTCCT 994514 37 100.0 41 ..................................... AATTGACTCAGCAACAAGCTCGCCATTGGCTTTGGTTGCTC 994592 37 100.0 40 ..................................... ACTTCTGCCAAATCTTTAGCAGAGCCAAAAAGCGTCCTAT 994669 37 100.0 38 ..................................... AAGATCTTTGGGGTCATCTCTTGCTCAATGTCAAAATT 994744 37 100.0 39 ..................................... TTCGAACTGGGAAATAACCGTTACTTCTAATAAGTTCAT 994820 37 100.0 40 ..................................... AATGACCTCAGTTTTTCTTGTTCAGGAAATACCCACTTGA 994897 37 100.0 38 ..................................... AAGATCTTTGGGGTCATCTCTTGCTCAATGTCAAAATT 994972 37 100.0 39 ..................................... TTCGAACTGGGAAATAACCGTTACTTCTAATAAGTTCAT 995048 37 100.0 40 ..................................... AATGACCTCAGTTTTTCTTGTTCAGGAAATACCCACTTGA 995125 37 100.0 39 ..................................... TTGGTTCACGGCTGCTTCGTACCATTGAGCTTGTGCCAT 995201 37 100.0 38 ..................................... ATTAATCTTCCTTCCAGATATCGCACTGGAAGGTTGGG 995276 37 100.0 39 ..................................... TCTCTGTATCTCTTATACAGAGAATTCCCGAATCATCAT 995352 37 100.0 37 ..................................... TCAACCTATTTTCTGTACCTGTTGAATGAGCACATTC 995426 37 100.0 39 ..................................... ATGATTATGATTAACAAAACTACGGTTATGAATAGATAC 995502 37 100.0 42 ..................................... TTAAAAATTGACCGTTAATACACGCTTTTAAGCTAACGCTGA 995581 37 100.0 39 ..................................... TCAACTAAACCACAAACGAATGCTGGAAACGCCCATCCT 995657 37 100.0 43 ..................................... ACTTACCCAAATTTCAGCTCTAACAAATGAACCAAATTTTGGA 995737 37 100.0 38 ..................................... ATTCTGTACCGAAGAAATACTACTTCTCTTCACAGCGA 995812 37 97.3 41 .................................A... TCAATTACTTTTTTTTCAACTTCTTTCTTTGTCATTTTTTG 995890 37 97.3 42 .................................A... TATTGATAGATTTATCCCTCAATGCTTGAAGGAATTTTTCTC 995969 37 97.3 40 .................................A... CATCCACAAGCCATTTACATAGCCACATACGAATGCTGGA 996046 37 97.3 38 .................................A... CACATCAACTTCATAACGAAGCTAATGCGTTCGTTATA 996121 37 100.0 40 ..................................... CCTCTCTTCTTCTTCACCTCACACCGGGGGGAGACATTCC 996198 37 100.0 39 ..................................... GGAAATGGCTTCTGCTAATACAGAGGCAGACCCGAAAAG 996274 37 100.0 41 ..................................... TGAACTGGAAAATATCCAAAAGATCTAATGATCCCTTCTGC 996352 37 100.0 38 ..................................... TTGGCTTCTTCAATAGTGATTGCCCGCATTTCGGAATT 996427 37 100.0 35 ..................................... ATTACTTTTTGGTTTTTTCTGTAAATCGCGACATA 996499 37 100.0 38 ..................................... CTATTCGTACCCTATCATCACACGGATCATACCGGAAG 996574 37 100.0 40 ..................................... TCTTTTCTGAATTATACAGGTTTTTCCATCCCCTAAATGG 996651 37 100.0 39 ..................................... TTAAACTGTTGTTTCAGTGGAACTAATCCACTGGCCTTT 996727 37 97.3 41 .................................A... AATATTCTTCTTATTCGGGTTAATTTTTCAATTACTTTTTC 996805 37 97.3 38 .................................A... CCAATTCTGCGCCTTTTCGCTCACCGCCCAAAATCCAT 996880 37 97.3 43 .................................A... TACCACAAGTTCCATAATGATGTACTCCTCCCTCTTCAGCCCA 996960 37 97.3 36 .................................A... AATAGATAAGGTTTCCCATTTTCAGACATAATGGGA 997033 37 97.3 46 .................................A... GCATTTGAAAGGCAAGGGTCAGAAAAACGGAGCCATTGTCGGTTTG 997116 37 97.3 38 .................................A... GAGTGCTGTGGAGATTGTCCGGAATAATCTCAACCAAT 997191 37 97.3 40 .................................A... TAAAAGAAACGGTTTCTTTCCAGCAGCCATATCTGGCATC 997268 37 97.3 36 .................................A... GAAAACACTGGCACAGGATCAGCTCCAAAACTGATG 997341 37 97.3 47 .................................A... CTCCCAGAACTCCTGACGGGTACTGTTGTACCCGTCCAGGATACTCC 997425 37 97.3 36 .................................A... GAAAACACTGGCACAGGATCAGCTCCAAAACTGATG 997498 37 97.3 47 .................................A... CTCCCAGAACTCCTGACGGGTACTGTTGTACCCGTCCAGGATACTCC 997582 37 97.3 37 .................................A... CGAAAATATTAAAAGAAACGGCTTCCCATTTTCAGCC 997656 37 97.3 40 .................................A... TCAAACCGGAAGTGGTTTCCCGGAAAAGCAAAAGATATGC 997733 37 97.3 41 .................................A... TTCTCGTATTATTTCTTTTAATTCTTCTTTTTTCATTTTTT 997811 37 97.3 37 .................................A... TTGCCTCAGATAGGGTTATCATCCTCATTTCGCTGTA 997885 37 97.3 41 .................................A... AAAAAAAAGGCAAATTTGATAATTCCTGAATTATATCAGGA 997963 37 97.3 37 .................................A... GCTATAATCGGCTTCTGCAATATATATATTTACTCGT 998037 37 97.3 39 .................................A... GAATTCATCGCATAGTTCTACATATTTTTCCACCACCCA 998113 37 97.3 39 .................................A... ACTTGATAGTGGTCTGATGTAAATTGAATACATCTTTAT 998189 37 100.0 38 ..................................... AGCACCTCCCAGAGGATGTAGATAAATGAGGCAATCGT 998264 37 100.0 35 ..................................... CAATTGCCAACTTCTTCACCTCTCTGTCCTGAAGG 998336 37 100.0 37 ..................................... TCACAACTTTCTATTTCCGGATGGTAGAATTCACAGT 998410 37 100.0 41 ..................................... TCCCTAACCCAACCAAGCCCGCTAAGGTCGATATCTGGCTT 998488 37 97.3 37 ...........T......................... TTCGCCGAACTCTCCAGTTCTATAAGCTCTAATCGCA 998562 37 100.0 33 ..................................... GGTGCAAGCACTTATTCACTTTATGACAACCCA 998632 37 100.0 41 ..................................... AACTTTACCACAGTTCCTTCGGGAAGCTCACCACGGAACAC 998710 37 83.8 0 ...............................GCCTCT | ========== ====== ====== ====== ===================================== =============================================== ================== 78 37 99.0 39 ATTGAAATAAACTTGACCCGTTTGAGGGGATTGTGAC # Left flank : ATATCTGTCTCCGGAATCGGATTATATTCTTACTTTGAAGATCTAATCATCGTTTAAAAACTCTTATCTCAATGAGTTATTTGCTTTCCCTGCGTATGAATAGATTCCTAATATCATATCTTCAAAATCAAAAAGATATTTTATGCTTGACTTATTTTATGATTGATTATATAAGGAAAATTGTATGTATAGCTAACTCGCTATATAAACCTTGGCAAGACAAAAAAAGGAGCTGATATTATGATTATTTATGTATGCCCCAAAAATAATTATAAAAGAACAGCGATTGCCTGCTCTCTATGCAATTTCGCTAAACTGCTCTATTATAACATAGTTACAAGCTCTATCCACAAAATCATTGTCCCAAACACAATTACTTGCTATATATACAATTATACAAAATATGCATCTATACCCCATACCCCCAATCATAAATCTATTAGCCATTGCCATTTTGATAACGATGAATACTTTATGCTTAATGCCTAAATGTATGTGCT # Right flank : TCACAGATTACACAGATTTCACAGATGAATATTTCACGCAGATTTCGCAGATTACGCAGATTTGAATAGGTAAGGGATGAACAGGATAAAAGAGAATTTGGGGATAAAAAAGAATGGAACACAGATAACTGGATTAAGCGGATTTACACAGATAAAAAATAGGTAGGGGATTATTTTAGCAGAGGGTAGAGAGCTTGGGGCTTAGAGGAAAAATAGCCCTAATATGAAAAGGATTAAAAAGGATTTTTGAGATTTTATACAATATCCGGATTGATAAATCAGTAAGATAAGAAAAATTCAAAAAAATACCTTTTTAACTCTGAGATAACTATAAAACATCCCAATAAAGCTCGGAGAGCGAAACAACGATAGCGATGGGTGCATAAGCCCCTCGGGAAAAGAGTAATCACATTTAATATATATATCAATATATTGTCCAAAAAAGAGCTGTCCCGAAACTAAAAGTTAGTTTTGATACAGTAAATATAAGCCATTTTAAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAAATAAACTTGACCCGTTTGAGGGGATTGTGAC # Alternate repeat : ATTGAAATAAACTTGACCCGTTTGAGGGGATTGAGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-3.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 1498953-1486615 **** Predicted by CRISPRDetect 2.4 *** >NC_020449.1 Candidatus Cloacimonas acidaminovorans str. Evry, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ======================================= ================== 1498952 38 100.0 36 ...................................... TGAAAAAACAGCAGAGTGGGGACACTTCGGCATCGG 1498878 38 100.0 36 ...................................... AGCCATCCCACTTTGGCACCAGGGTATTGAAGAATT 1498804 38 100.0 36 ...................................... ATATAATATATTTTTCCACCTGCCTCTCCGCTAACC 1498730 38 100.0 35 ...................................... CTCTGAGGATAATTGGGATAGCTCCCTTTTCCTTC 1498657 38 100.0 35 ...................................... TTTGCATTGAATATTTCGTGCATTCGCTCCGTTGT 1498584 38 100.0 35 ...................................... CGGATGCAGGAATTGATGAAATAGATATTATTCCG 1498511 38 100.0 35 ...................................... GATTAGCCACTGGTGGAATAGGTGGTGCTGGCACA 1498438 38 100.0 36 ...................................... TGAAGAATTCCTTATCGAGTCCTTCAATGCAAGCGG 1498364 38 100.0 35 ...................................... CTCCGCCAAAGCCCCAAAGCATTTCAGCCATTAGT 1498291 38 100.0 37 ...................................... TCTCTGGCATATCCATGCCCATCTCTTCAAGATCAAA 1498216 38 100.0 37 ...................................... TGGCGGGAGATGTGCCGCAGCATGCAGTGCGTATGTG 1498141 38 100.0 36 ...................................... TGCTCCCGGTAAATTTCCGGAAAGGCGGCGGCTAAA 1498067 38 100.0 37 ...................................... GCTCAATTGCCGATATATGGAGTAAAAGTGCCGATAG 1497992 38 100.0 36 ...................................... TACCAAATATGAAAGCGTGAAGTGAACAATGCTCCG 1497918 38 100.0 35 ...................................... CAAATTACTCTGGAAGATCATAACGAACTATACGG 1497845 38 100.0 38 ...................................... ATGTCAAGCTATGACGAGAAAATGGTTAATGCATATAT 1497769 38 100.0 35 ...................................... TTATTGAAAATGGAACAGTAATATCGGATGATGAT 1497696 38 100.0 36 ...................................... CTCAAAATAGAACATCTGAACTTCTTCACACCTATC 1497622 38 100.0 36 ...................................... CGATAGCCTTCTCAATCGCATTTGTAAGCTTCATAC 1497548 38 100.0 36 ...................................... ATCCTCCTATAGGCGGGGATGGAATCCCCTGATTTT 1497474 38 100.0 37 ...................................... AATATGAAATTAAAAATGGTAAAACATTCAGACAACA 1497399 38 100.0 35 ...................................... TGCCTGATGAAGGAAAATAAAAATAATTCAAAAAT 1497326 38 100.0 35 ...................................... ATGAGCCAGATATACAGACAGTCCAGACAGACATT 1497253 38 100.0 35 ...................................... AGGGTTGCTTCGGTATAAGTATCAGCTGTCCATAT 1497180 38 100.0 37 ...................................... TAGTTCTATAACTAAATCATAATACCCCGCTTTCTGT 1497105 38 100.0 36 ...................................... ACAGGATGCGCAAGCTGGACAGCAGCATAGAAATAA 1497031 38 100.0 36 ...................................... TAATTGGATTCCATATCGGGATAACACCAATCTTGC 1496957 38 100.0 35 ...................................... TATTCATTAGGCAATTCTCCAATCATTTTCTTTGA 1496884 38 100.0 36 ...................................... ACATAGAAAAGTGCAAGGAATAGAATACCCCCATAA 1496810 38 100.0 37 ...................................... TGAAAAAGTCAAAGAAAATGCCAATGCAACCATTATT 1496735 38 100.0 36 ...................................... CCAAGCTTTGTCTTGGCTATTTTTGATGATGTTATT 1496661 38 100.0 36 ...................................... GGTCTTGGTTTAGGTAGACAGTGATGTTATGGATAG 1496587 38 100.0 37 ...................................... ATGACGCTATTTTCACGGACCTATTTTTCCTGTCAAG 1496512 38 100.0 39 ...................................... GGAAACTTACTGGCAAATAATGGAACCGGATCCGCGCGT 1496435 38 100.0 37 ...................................... AGAGCATCAACTAACTCCATTGAAGAAGGAACAACAA 1496360 38 100.0 36 ...................................... AATGATTGCGGAATTAGTGAGCTTTTGACTAATTCC 1496286 38 100.0 36 ...................................... ATAAAATAGAGTGGAAACCTGTAAGCATACCAAACT 1496212 38 100.0 37 ...................................... CAACTAATAATGAATGGCGTTGCTATCTAAGAAAGGA 1496137 38 100.0 36 ...................................... ACTGATTTCAAATCAAAGTATTTTGACATCTTTTCA 1496063 38 100.0 36 ...................................... ACTTTCATTCTTTCGGCTAACCGAAAGAGGACTAAA 1495989 38 100.0 35 ...................................... ATTTTTCCTCGGATTTTACCCTTACAGTCTAAAAA 1495916 38 100.0 37 ...................................... TAATGGCGGAAAGACCATCCACAATCAAACTCATACT 1495841 38 100.0 35 ...................................... ACAACTTGTATTTTCCCAGAATGATTTTAGCTACA 1495768 38 100.0 37 ...................................... TCTAAAGCGATAGAGAAATGGATACTCGGAATAAAGG 1495693 38 100.0 38 ...................................... TAATGGCGGAAAGACCATCCACAATCAAACTCATACTT 1495617 38 100.0 36 ...................................... TATCGGGGATAACGTTTACAATCTTTCCTGTTGTCA 1495543 38 100.0 37 ...................................... TTACCAATACATTATTGAGAATTGTGGTTACAGGCCC 1495468 38 100.0 35 ...................................... TTGCTGAGCTTAACCAGAGATAATCTTTTCTTGCT 1495395 38 100.0 36 ...................................... ACTGATTCAACTGAAGAAAGAATGAAAACAATTCAA 1495321 38 100.0 36 ...................................... CCCTTCTTAAGAAGGCAGTGGAGAAATGGATACTCA 1495247 38 100.0 37 ...................................... ATAAAATAGAGTGGAAACCTGTAAGCATACCAAACTA 1495172 38 100.0 36 ...................................... CTCAATGAATTCAAAGACCTAATAGCTTCCTATGCA 1495098 38 100.0 36 ...................................... GCTTCTACAATATATTCCAATTGAGTTGCCCATAAA 1495024 38 100.0 36 ...................................... AAAGTTTCTGTACCCCGTTACTGGTAAGCAAACTTT 1494950 38 100.0 36 ...................................... TGACATCGGTTACCTCCTTAGTCCTTTTGAGGGCTA 1494876 38 100.0 35 ...................................... CCAATGCCAATAAGTATAACTCATAACCTATTCTT 1494803 38 100.0 38 ...................................... CCCATTTTCAACCATATCAGGATACCTTTTTCCTTCCA 1494727 38 100.0 36 ...................................... GCTTGTGTCTCAAAGAAATATTCATTAGCATTTTCT 1494653 38 100.0 36 ...................................... CCTCTATCAGGTTCAATGCTGGTCAACTCTCCAGTA 1494579 38 100.0 36 ...................................... CTATCTAAGAAAGGACAAGAATTTCGTTATCATAAG 1494505 38 100.0 35 ...................................... GATGTATATCTACTATATTCCTGTCTTCATCTTTC 1494432 38 100.0 35 ...................................... CTCCTTCTCAGGATTCCACTCCGTCTCAGGACTCT 1494359 38 100.0 36 ...................................... ATAGCTATTACTTTGACCTCTATCTCCCGTGCAATC 1494285 38 100.0 36 ...................................... TTTTTTTCTGCGTCAATATCTATTCCATTGCCCGCA 1494211 38 100.0 36 ...................................... TATATATGCCTTTGCTTGGCCTTGGCTTGCCGCGGA 1494137 38 100.0 36 ...................................... TCCTTCCGTCTTCCGCTTTTTCGTGGTATCCGTAGC 1494063 38 100.0 36 ...................................... GCAGACCCGAATATTCTTCTTATTCGGGTCAATTTT 1493989 38 100.0 35 ...................................... CTTTCCCATTTTTTCGGTATATCACTACACATGGA 1493916 38 100.0 36 ...................................... TTACGGGACTGGTCTCATATTTCGGAAAGCGCTTAA 1493842 38 100.0 35 ...................................... TTTTCCGCGAACGAGAAGCAGATGGATTTACTCCA 1493769 38 100.0 39 ...................................... TCCGCTCCTAATAAAGCTTGAATTGTTTTCATTCTTTCT 1493692 38 100.0 39 ...................................... ACGATCAAGTCCATTATTACCAACTCTATGGACGTGAAT 1493615 38 100.0 37 ...................................... TAGGGAATGAGTGTCAAAATTGGGAAGGAATTCATCT 1493540 38 100.0 37 ...................................... ATTTCGCGAATTCCATAGTCAATGTCATCGCAGAAGA 1493465 38 100.0 37 ...................................... ACGGAAAACAGGGTGTGCAAAAATAACACAATAAAAA 1493390 38 100.0 36 ...................................... GAGACACCTCCCCCCGCATTGGGTGCCTTCCAGACC 1493316 38 100.0 35 ...................................... TTACCGGATGCAGGAGTAGTGGTATCGGTTACCGG 1493243 38 100.0 36 ...................................... ATATATTTCCCAATTTTTTACCTTCTGTGTAACAGA 1493169 38 100.0 35 ...................................... GAAGGCCAAAGGCAAAGCCAAAGGCCAAGGCAAAG 1493096 38 100.0 37 ...................................... AGATCATTAGGATTTTTTCCTGTCATATCGAAAAGTT 1493021 38 100.0 36 ...................................... TGCCATTTTTCCTCCTTAATCCTCTTGGGGTCTATA 1492947 38 100.0 35 ...................................... ATGGTAGAAATAATGGCTGGGTATTGGATTCATAA 1492874 38 100.0 37 ...................................... TTAAACGCTAAGAGTAAGTCCATAACAATCGTCTCTA 1492799 38 100.0 34 ...................................... AATAAATCTCTGCACGCATAAGAAACAGCTCTTG 1492727 38 100.0 35 ...................................... TCTTACTTATATATGCAAACTTTGGCTATGTTAAG 1492654 38 100.0 35 ...................................... CCCAAATACGCATTCAAAGCATAAATCCAAAGCAT 1492581 38 100.0 36 ...................................... CCTTCAATAGCAAATTTGAAAATAATATCAATGAAT 1492507 38 100.0 36 ...................................... AAAAAAGGAGAAAAAAGAAATGGCAGTTAAAAAATG 1492433 38 100.0 36 ...................................... CCAAGAATGAAGTTGCTTTGGCTATATCGAAAGAAT 1492359 38 100.0 35 ...................................... CCTCTCCCGTTAATTGGTCCCTCCTGGACGGGTAT 1492286 38 100.0 35 ...................................... ATGGAAATGCTTATATAGACGAACAAAAATGCAAT 1492213 38 100.0 36 ...................................... TAGTAATCTGCTCCTTTTCTAATTCCCAGGGACTGT 1492139 38 100.0 35 ...................................... AAGAGATAACTGGTATATGAATTTTATAGATTGCA 1492066 38 100.0 36 ...................................... GATTTCCTGAAACAAAATCTACAAGGGCATCCAACG 1491992 38 100.0 36 ...................................... ACGAAAAAAAGGGGTGTGGGAGAATGGCATCATAAA 1491918 38 100.0 35 ...................................... GCAGAGCCAAATATTACTCTTACTCGGTTCAGCTT 1491845 38 100.0 37 ...................................... TTTTTTTCCATTCCTATAATATATAAGGCAAAAAAAA 1491770 38 100.0 36 ...................................... ACAATAAAGATGTAATGGCAAAGTCATCTATTTTTA 1491696 38 100.0 37 ...................................... GGTATATCATCCCCTGGTATTCCTTCTTTATATTTAT 1491621 38 100.0 36 ...................................... ATTTTCCAGTCCATTCATAAATAAGCTGTGCTTCTT 1491547 38 100.0 38 ...................................... TTGAAAAGTTTTCCGGAATCAGAAATTGTTTTGTTTTC 1491471 38 100.0 36 ...................................... ATAATCTACTCGCAATAAAAAATTCCAAACAATTAC 1491397 38 100.0 36 ...................................... CGAGCCATAATTCCGTATCCTCATCCAGTTCCTTAA 1491323 38 100.0 36 ...................................... TCATAAATAAATTAGTGAATGCATAGGTTTGTATAT 1491249 38 100.0 36 ...................................... ACGGAAAAAGGGGGTCCGTGAAAATAGAATCATAAA 1491175 38 100.0 37 ...................................... TCAAGGATAATGGTTTTACCGTTGAGTGGTCATTCAT 1491100 38 100.0 37 ...................................... TCTCCTTTTGCCTCGCTTTCCGCGCGGCTGTTTTTGA 1491025 38 100.0 35 ...................................... CTTCTTCCGTGGTAACCATTCTTTTTTCACTGTTC 1490952 38 100.0 37 ...................................... TGGAAAACGCTTAAGACAATCATTGCAACGGGAAAAA 1490877 38 100.0 36 ...................................... CTGGGCACGTGATGGCTGGGCATTCCCGGCCTTCGT 1490803 38 100.0 35 ...................................... TCACAGCGCATCGGATTCCAAGGAAAATAGGAAAC 1490730 38 100.0 37 ...................................... TAGTATTTCTTTACCGCCATAACTGATTACTAATACT 1490655 38 100.0 37 ...................................... GCCTTTCGCGAATGATTTCCTGAATCTCCTGCGTCTT 1490580 38 100.0 37 ...................................... CCGTCCTCCAGTATATCCATTGCCTTCATTACCAAAT 1490505 38 100.0 36 ...................................... TTCACGATGGGTCAGAAGAAGTAAAAAATTTATTCC 1490431 38 100.0 37 ...................................... TTGTTATCTCTGGAAGCAAACTCTCATCAATTTCATT 1490356 38 100.0 37 ...................................... ACGGAAAACAGGGTGTGCAAAAATAACACAATAAAAA 1490281 38 100.0 35 ...................................... ATTTATCCCCGCATTTATCATTTTAGTAAGAATGA 1490208 38 100.0 36 ...................................... GAGACATCCCCCCCCGCATTGCGGTGCCTTCCAGAG 1490134 38 100.0 36 ...................................... ATACACCTTCCAATTCTGCGCTTTTTCGGTAGCAGA 1490060 38 100.0 36 ...................................... TACCTAACCATTGCTGATTCATAAGGATCAGACGGT 1489986 38 100.0 35 ...................................... GAGACACCCCCCCCACCTTGCGGTGCCTTCCAGAC 1489913 38 100.0 39 ...................................... CCCCACAAAAAATTAACGAGTCAACCTCTGAATGAGATT 1489836 38 100.0 37 ...................................... TATTCTTCCAATGACGAGGTGAACAAGAGACAACTCT 1489761 38 100.0 37 ...................................... GTAAGTAAGACACCCAAACTATCCATTTGTGGACTTG 1489686 38 100.0 35 ...................................... ACGATAATCTATTGTACAGTAATTACCAGTAGTTA 1489613 38 100.0 35 ...................................... ACCTTCACATCTCATTGAGACCGCTGGGAAAATCC 1489540 38 100.0 36 ...................................... ACAACCCACAAGTCATCAATAATAATGCACGTAAAA 1489466 38 100.0 36 ...................................... CTTGACAGAAAAAGGGAGTGTGGAAAAAATAACATT 1489392 38 100.0 37 ...................................... TAACTTTTCCCTCCCCAGCAACGATCGCTGGGAAGAT 1489317 38 100.0 36 ...................................... CATTAGTGGTAAACTGTGCGAAGGCGTATATATGGT 1489243 38 100.0 36 ...................................... ATAATGTAACCTGGAATCATATTACACAACACTATG 1489169 38 100.0 36 ...................................... GAGGAAATTTTGGAAATTGTGGATAACACAAATCAA 1489095 38 100.0 36 ...................................... AATCTTGAGCTGACCCGAATATCACTCTTACTCGGT 1489021 38 100.0 37 ...................................... ACAATGTTAGCGAAGACTATAAATATGAACTTACAAT 1488946 38 94.7 36 AG.................................... CAACTTACAGCAAAAATTCTTGCAAAAAGTTTCAGT 1488872 38 100.0 36 ...................................... CAACTTACAGCAAAAATTCTTGCAAAAAGTTTCAGT 1488798 38 100.0 35 ...................................... TATGAATGGACGGGTATTTCCGGTGGGAGAGGCGG 1488725 38 100.0 35 ...................................... TGAGCCCAATGTGAAGGATTTGCAAGGCGATTGGG 1488652 38 100.0 36 ...................................... GTCCTCTCTCGCGAAAACGCGAGAACGAAAGTCAGC 1488578 38 100.0 36 ...................................... TGAATCTACAGACCGCTGGGAAACCCAGCGGTCTTT 1488504 38 100.0 34 ...................................... AATGGTTGACTACATCATAGTGAAGGAAGAACCG 1488432 38 100.0 35 ...................................... TCCCAGCCGGCTCTTTTAACCAATGACCACAAATA 1488359 38 100.0 37 ...................................... CCGGGCAAATAAGTAGGGTGAAAGTTCATTGTGAATA 1488284 38 100.0 36 ...................................... AGAATTGCATCGGATGGGAGGTGAGGGATAATGAGG 1488210 38 100.0 37 ...................................... TCTAAAGCAATTGAAAAATGGATACTCGACCTTCCAT 1488135 38 100.0 36 ...................................... CCACGGAAGAAGCTGATGGGATAGCCATAAGAAGTG 1488061 38 100.0 37 ...................................... TACCATCAGAATTAAGGGATGCGAGAAAGACCTTTTT 1487986 38 100.0 36 ...................................... ATGCCAAGGCAACTGCTGTGTTCCGTGGTGAATTGC 1487912 38 100.0 37 ...................................... ATCATGATACTACTGTCTTTACCCCTGCTGCCTATGT 1487837 38 100.0 37 ...................................... TTATCCTCTGATTTGCTTATATCTATTTTTCTCTTCC 1487762 38 100.0 36 ...................................... CTTCTAATAATTATGATTCCCTAATTGAGAGTTTAA 1487688 38 100.0 36 ...................................... TTATTAACCTTCTCATTTATCCTCCAATTCTATTGT 1487614 38 100.0 36 ...................................... CTTCTATTCATATTCATTATCCGATTTTTTGTCTGC 1487540 38 100.0 37 ...................................... GTCTGCTATCGTGCGGGTCTACAACCTGAATTATATA 1487465 38 100.0 36 ...................................... AAAAATTTATTGCCGCAAATGTGATACCGGATTTGG 1487391 38 100.0 37 ...................................... GCGATATTGGAATACGCTATCAAGTAGCAGGGGCAAG 1487316 38 100.0 35 ...................................... CGCTCTCTAGAGCAGGAGTGAACATTTCTCCTATT 1487243 38 100.0 36 ...................................... TAAAAGACTTTAATTTTTACACAACTTAAAATTCCT 1487169 38 100.0 36 ...................................... CTGTTATGCGTGCATAAAGACCTGTATCTTTGTTCT 1487095 38 100.0 36 ...................................... ATAAATTCAAAGATATAGCAGCTTTGACGCCCTTCA 1487021 38 100.0 35 ...................................... TCCTTATTCTCGGTTTGCGAAATCGGGAAATAAGG 1486948 38 100.0 36 ...................................... TTTGCAATTCATTCTTACTAAAATGATAAATGCGGG 1486874 38 100.0 37 ...................................... CTATACATCAATAAATAACGACTTATTACACCACAAC 1486799 38 100.0 35 ...................................... CAAGAGCAAATACGAAGAGGTATCTGCTCTCAGCA 1486726 38 100.0 36 ...................................... GATGATTACTGGCTGGGCAACTTGGTTAAGCGAGAG 1486652 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ======================================= ================== 167 38 100.0 36 GTTTTTACTCTACAGTCCATTAAATCAAGGATTGAAAC # Left flank : TGCACTTATCGGAATTTGTGCTCTGTCTGAATATGAGATTTATTCACATATATGTTTTTTATGTATAGAGTGTTTGCTGGAATAAGAAAGAAAATTATGGAAATCCAGCTCTTGCCGTTAGAATGAATAAAACATCATTAGTTAATTTAATGGTGTTATCATTCCACCCTTGATGTGGAATCCATAGATTTATGGTGAGAACTATTAATGCTAATTTACTTTCGTCCCTTATCATTAAAGATAAGATATTGTTTTAATTTGGATGAAAAAATTAACATTATACTTGCTTTTTAAAGATACCGTTTATCTTAATCTAAGAAGAATTTATTGATTTTTTTGGTACTTTTTCGCTCTTTTATAGATTTATAGAGTGTTTGTGCCTGCCCGAAATTGCCTTTTGGCTCATTTGGGAGCTGGTTTTTTATCAAAACTATCAGTTTGGATTATCTGAAAAACCGGTTTAAGTTTGTTATTTGTGAGGCACTTATATAAGAAGATGA # Right flank : AAGATTTAGGCACTATTATCCTGATGATATAGGAACGGAAGAAGATAAAGATGCGGCTAAAGTAGCCAATGCAGTAATCCTTTTCTTGAAAGTGTTAGAGCTGAATAGAAATACAGGATTCATTATCACCACGAATCTGAATTCAGAAGAACTGAGAAATAGATACGGTGACTGCCTGTTTGACCGCATTATAGGTCAATTAACGATACTTTACTTGAATCCGCATTCTTATAGAAAAAGTCACGCAGAGATAGTGAAATGAAAAAAAAAATAAGAAACCAGAAAAGGCATTTGAAGAGGAATTCGCGTGGCGTGCGAAAATAAAGAAATGCCTTTATGTGAAAATACCCGACCCGATAATGACTGGGAAAAGATTGCGGCTGATTAAAGAAAGAGGGGTGTCTGATGAATTAAGACGCTCCTTTGATGGTATTCTGGTGAAAAATTCTGGTAACTACTGTTTAGAATTCAAGTTCGGCTACAATAAACTTTCCGAACAC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTACTCTACAGTCCATTAAATCAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA //