Array 1 16384-19412 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMSR01000011.1 Vibrio metoecus strain OYP5H08 Vm_OYP5H08_Contig_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 16384 28 100.0 32 ............................ ATTTAGCGGCGTATCGAATACAACAAACCGCC 16444 28 100.0 32 ............................ ACCCGCGAATGATTGACGGAATAAGAGGAACA 16504 28 100.0 32 ............................ TAACCGATTACGATATTGTCGTACCGCCTAAC 16564 28 100.0 32 ............................ GTGATCAGCAGGCCACGAACTTGCTCGAAGAA 16624 28 100.0 32 ............................ GTTTGATGTCGGAGGCCATTGTTGCGGCGGGT 16684 28 100.0 32 ............................ TAATACGCATCAAGCTATTGTAATTATGAACG 16744 28 100.0 32 ............................ ACCCACCACCGCCTTGCGGCGGCGGACTGCTG 16804 28 100.0 32 ............................ ACGCTGTCTAAATCAGCGATAACTGGCTTTTC 16864 28 100.0 32 ............................ AGAGACAACTTTTCTAACTTTGAGCAACTGTC 16924 28 100.0 32 ............................ AGCAAGTTCTTCGATATGGGGTTTGATGCTGC 16984 28 100.0 32 ............................ GTAACATAAACTCGTTGTTACAGCGTTGTAGC 17044 28 100.0 32 ............................ TAATGTTTCAACGCATCGTTGCATTACTAATG 17104 28 100.0 32 ............................ TCTGCGTGTACGTGATTACCTGCGTCAGATGG 17164 28 100.0 32 ............................ ACGCCAGACATTCTCAAAGTAAAGCCATTTGC 17224 28 100.0 32 ............................ GTTCTGGCGCGTCGATTGAGTTGTTATACGAG 17284 28 100.0 32 ............................ GCAAGAAAGTGAACCGCCTTCAGATAAAATGA 17344 28 100.0 32 ............................ TTGATACTCGTAATCATAAAAAGATGCCGTTC 17404 28 100.0 32 ............................ CCAAACATCGGGCGCGGTACAGCGAGCGTCAC 17464 28 100.0 32 ............................ AAACACCAGTCGAGCCCGTTCCCGACCCTGAT 17524 28 100.0 32 ............................ GCAAATGAGCGCGCACAAGCTCATGGAGCTTG 17584 28 100.0 32 ............................ TACGCTATGGGCTTGATAAGAACTTGGCGATG 17644 28 100.0 32 ............................ TGCCTTGAATCGACCAAACTCATCACGACCAG 17704 28 100.0 32 ............................ CACTCAGTTGCGTGCAGAGCACATCGAGTACG 17764 28 100.0 32 ............................ AGCCGTCCCAAGCTGAGTATCCGCATCCGCAC 17824 28 100.0 32 ............................ TACGCAACCTGCCTAGACGACTGTTTAACCCC 17884 28 100.0 32 ............................ TAAGAAATCCAGCTCCAACGAACGAGTTGCCG 17944 28 100.0 32 ............................ TTTTACAAGGAGTTTAGGGTCATAGTCAGATA 18004 28 100.0 32 ............................ AGAATCTTTTGCGCTTGGGCTGGCGTACCACT 18064 28 100.0 32 ............................ ACTGGCTGACCTGGATCTAACGTATCGAGCAC 18124 28 100.0 32 ............................ TGCATGGTCTTTTCATTCACTCTTAGCGGAAT 18184 28 100.0 32 ............................ TCGATGTATAGTTGAGAACCGATTCCAGCATT 18244 28 100.0 32 ............................ TGTAATTAACGGCGTATGGCTGATTCTGGTTT 18304 28 100.0 32 ............................ GTAGAGGTTAGATGCACCAGACGATGGCACTT 18364 28 100.0 32 ............................ AAAATGATGGCAGGTGGCTGGGCAGTTACCAC 18424 28 100.0 33 ............................ ATTTTCGCCTGCGCGACTAAACAGCTTTGATGA 18485 28 100.0 32 ............................ TGATCTAACGAGGTTTCAATGTCGATTAAACC 18545 28 100.0 32 ............................ ATAGTTTGACGTGATAGGCGTTTCATCCTTCT 18605 28 100.0 32 ............................ AACACGGTTATGTTTTTCATATCTAGCCTTGG 18665 28 100.0 32 ............................ AGAAAAACGCACTTGCGAAACTCTTTTAAAAA 18725 28 100.0 32 ............................ TTGCAATAAATGCGCGATCAAATGACTGGCGA 18785 28 100.0 32 ............................ ATTTGCGGCACCGACACCGGAGTACGTTATAT 18845 28 100.0 31 ............................ ACATACCCATATTTTGTATTTGCACCTACTA 18904 28 100.0 32 ............................ GTGGAAGGTTTTTTTAGATTAAAATGGAAGTC 18964 28 96.4 32 A........................... AGCATCGCTTTTGCGTTACCGTTGTTCGCTTG 19024 28 100.0 32 ............................ TGTTTGCGGTCAAACTCTAGCGCTTGGTTTGA 19084 28 100.0 32 ............................ TCATCGCTATCATCAAAAAGCATCCATAGCGT 19144 28 100.0 32 ............................ CTATTCGAGAAAGGCATCTATACCAATCGCAA 19204 28 100.0 32 ............................ GCATCCTGAATGCCTTCATGCACCGCTTGATC 19264 28 100.0 32 ............................ TGTAAAAATCGTTTCTCACCTCATCTTGAATT 19324 28 100.0 32 ............................ AAAAGTTTGGCCTTAGACGTTAGTTCTTCAAT 19384 28 92.9 0 ......................G.A... | T [19404] ========== ====== ====== ====== ============================ ================================= ================== 51 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAGCTTATTGAATGATCTACAAGGTTTATGCTGGTTAGGGCCTCTCAGCGGTTATTGCCAAATCAGTGAAGTGTTAAGCGTTCCTGAGCAAGTTCAATACCGGGTGATCTCAGCTAAGCGCCGTAATTTAAGTGCTGCGAAGCTGCGCCGTTTAATTGCACGAGGGAGTATAAATAAAGAAGGTGAGCAGCGTTATAAAAAGAAGATGCTGAATCAGAGTATTAAAGGTCCATATCTTGACTTACTCAGTAGCTCGACAGGACAAAAATATCGTAAATTCTTTGAATTTAGTGAAATTCAGGACGTGCCTGTACTTGGAAATTTTGATACCTATGGACTAAGTCTTAAGGCAACAGTACCTTGGTTTTAACCCTATTTTTTCGCTCTTTAAAAATATGCCTAAAATACAATGAGTTACAATAGGTGTTTTTTAACAAGGTAAAAATACAATTTTTACCCTAACGGACTGTTGTAACTTATTTTTATAGATTTATTCTATA # Right flank : ATCTTTATATATCTTATGGTTGGGGTTATATAAATGACAGTTTGCTTTGAGATTTCCCGCTTACTGGCTGTATATCCAAAAATGTGGTAGCGTTTCCCACACTAACACCAGTCTATTAATTAAGCCGCTGCCCTTCGGGGTGGCGGTTTTTTTATGCCTGAAATTTGGAGCCGCACATGCAAGACAAGAAGTTATTGGGCGATGAACTTTCACCAAAATCGACCATTAATGCCACTACGGATATGAGTCAGTCTGCCTTTTTACCGAAAGGCTTTCAGTTTGAAGCCCCTAAAGCGCCGCAACGCAACTACGATGTGACGTTAGGGGATACCGCTAAAGCGGTCGGTAGTGGCGCTCTGCGCTCTCTGGCTGGGCTTGGCGAACTCTCGGAGAACTTCCTTGGTGTGGGTGAGAGCTTTCGAGATTTGATGTCGTCTGGCTCGGATGCTCTGCAAGAGAGTATGACTCAAGATGGCCGTGACGCGCTAAGCTCCCGTCTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 95209-98959 **** Predicted by CRISPRDetect 2.4 *** >NZ_NMSR01000007.1 Vibrio metoecus strain OYP5H08 Vm_OYP5H08_Contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 95209 28 100.0 32 ............................ GCCCTGAGTCGCTGCCACATAAGCGCCCGATT 95269 28 100.0 32 ............................ ATATGTCCTCACTGTGGTACACCGATCCCCGA 95329 28 100.0 32 ............................ TAAATAAATCGAACACTTTTAAACATGTGCAT 95389 28 100.0 32 ............................ AATCGCTAATTGAGGGAAAGAGAAACCCACGT 95449 28 100.0 32 ............................ TGTAGCCTGAATAGACAAAAAAAGGTTTTTTT 95509 28 100.0 32 ............................ TGCAAGCGTGGAGCCAAGTCTTGATGATGTTT 95569 28 100.0 32 ............................ TGGTATCGCCCAGAACATCACCGTGACCAGTC 95629 28 100.0 32 ............................ TCGACGTGCGCGGCTGAGATAGTCTTGCGGCT 95689 28 100.0 32 ............................ ATAAAGGTGGTTCTACAAGGCCAGATTAATGA 95749 28 100.0 32 ............................ GACACTTCGCCCGCCGTAAGTGACGGTTTTAC 95809 28 100.0 33 ............................ GATTTTTTGATTTAATTACGAAGTCTTCTTCTT 95870 28 100.0 32 ............................ AAACACCGCCAACGAAAAGTGATAATCACCAA 95930 28 100.0 32 ............................ TTGACTCGTATCACGTCTACTATCCCGAAGCT 95990 28 100.0 32 ............................ TCACTAACTGGGAGTTAATGCAGTTGGTGGAG 96050 28 100.0 32 ............................ ATCAACCGCATACACCGAATTCTTGCCAATCC 96110 28 100.0 32 ............................ TGACGCTCTCGGTACAAGTGCTTACAACGCAA 96170 28 100.0 32 ............................ ATTTTTGAATCACTGAAAGATGAGTGCAGTAA 96230 28 100.0 32 ............................ TCACGCAATTCTGTGAACTGAAAGGAATTAGC 96290 28 100.0 32 ............................ TTCAAGCTCGTTCTGTGTTTTTGTCAAATCAC 96350 28 100.0 33 ............................ CAGCGCCAGTGCCTCACTGCCTGACTGCAAGCG 96411 28 100.0 32 ............................ CTGCGCCAATCACGCCTATTGCTGCGCTTAAT 96471 28 100.0 32 ............................ GCCAATTGACACGCCAAGCGATGCCACCATAG 96531 28 100.0 32 ............................ CGACTAGAAACTGCACCACTTCACTAACCATT 96591 28 100.0 32 ............................ ACATTACGACCCCATGCATCCCAGTTAATCAC 96651 28 100.0 32 ............................ ACTAAGCCAAACGGACAGCTGGATACTTAGCG 96711 28 100.0 33 ............................ ATAATCAACTCACTGTTGCGACTATCTCAACCA 96772 28 100.0 32 ............................ CGGTTCATTGATCACTTGGTGGAGAATGACAG 96832 28 100.0 32 ............................ AACAAAAGAAAGTAGATGTTCGCCGCCTTTGC 96892 28 100.0 32 ............................ TATACCCAGTTTGGCCGCCGTTCTTTTCTGCA 96952 28 100.0 32 ............................ AAGACGAGAACACAACCAAAGCAAACGTGATC 97012 28 100.0 32 ............................ TTACAGGTTTGCGTACAACGCCGCCACGCCTG 97072 28 100.0 32 ............................ CATCAGCAGTCGCATAAATCGCATAATCAACT 97132 28 100.0 32 ............................ ACTTTAGGCTCTGGCAGTTCGTTTTTAAAATC 97192 28 100.0 32 ............................ ACGCTGCACGCTCAATGCCTTTGCCGCCATTG 97252 28 100.0 32 ............................ GAACAAAGTAGCCGGTGTGTATGACTTTCCTG 97312 28 100.0 32 ............................ TAGATCAGAAATCTGGTGACGTAACTGGTCGC 97372 28 100.0 32 ............................ ACTAAAAGCGTTGATGCAAATAATAAAGTTGC 97432 28 100.0 32 ............................ CGTTGAACCCGAACCCATAAAGGCATCTAAAA 97492 28 100.0 32 ............................ TTTCCATTCAAGCACTTCTTCTTATGCAACGA 97552 28 100.0 32 ............................ TATTGTTCGTGACATTGAGCGCAAAAAGAAAA 97612 28 100.0 32 ............................ TATCGGCTCTCGGGTGATGCGCCGCAATTATG 97672 28 100.0 32 ............................ ATCAACCGTCACGCTCTTAGCAAGCTTTCCAG 97732 28 100.0 32 ............................ CTATCAGTTTCAAGTGGGGGAGAGGTTAGAGT 97792 28 100.0 32 ............................ GTGTATGAAATGAGCCGCCGCATGGGCGCGCA 97852 28 100.0 32 ............................ GTATGTAAAAGTCACTGCTTATATGAAATCGG 97912 28 96.4 32 ...................A........ TTTTAAACAGGGTTTAAACGTGGCGGTGAATG 97972 28 100.0 32 ............................ AACTTGGGAGGGTGATCAACAAGCGCAGTTTG 98032 28 100.0 32 ............................ TAAAACAGTGGCTCAGGAAGATGGCGAACCAG 98092 28 100.0 32 ............................ ATGAAAAGGATAACGGCAAAGAAAATGAGAGC 98152 28 100.0 32 ............................ GATACATGACACTTTAAATATTTTATTTACTG 98212 28 100.0 32 ............................ ATCCGTAGAATGCGCAACCTAGAAGTTAGAAA 98272 28 100.0 32 ............................ AACTGAATCAATAAATTTCATTTTAGTCTTCC 98332 28 100.0 32 ............................ ACTTTCACGCCTCTCTGATTTAAGCTTTTGAA 98392 28 100.0 32 ............................ TGAGAGTATGGATAGTGATTACATTCCAGCGA 98452 28 100.0 32 ............................ GCGAGGATTTTGCTTAATTTTTGCAATTTCTT 98512 28 100.0 32 ............................ GTTCGGTTTTCGAGACGTCTTTCGCCGTGTTC 98572 28 100.0 32 ............................ AAGCGAGAACACGAAGACAAAGACCGCGCACC 98632 28 100.0 32 ............................ ACGTATCCCCGCTTCAGCAAAAAGCGCCCCGA 98692 28 100.0 32 ............................ GTTGAGTTCAGTCTTCAACATGGTAACTCTAA 98752 28 100.0 32 ............................ TTAATAATATTCTGACTAAGTGACTGACCTGA 98812 28 96.4 32 ...........C................ GAGAAAGTGTTTGATAATCTCGGTTTGCTCAT 98872 28 100.0 32 ............................ GCGCTAGGCATATCGAAATCAGACGTCAAAAC 98932 28 89.3 0 .............T...........TT. | ========== ====== ====== ====== ============================ ================================= ================== 63 28 99.7 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGTGTAACTTACGTAAGTTTTGTACGCAAGCAGGTGAAATCGCCCGAACGAATAGAGCGGGATATGCAGCAAAAAGCTGTCCTATGGGCAGCAAAATCTGGCAAACCGCTGGTGGAATGTTTAGCGGATTTACAACAAAGCAAGCCGACAACATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAGCGCTCACCAGACAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGAAAAGCACATCACAAGATGGGAGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCTACCGTACCGCACTTTTAAATTGAACGAAAAAGGGTAGTTTTAACCCTTTATTTTTGCTCTTTAAAAATGCGCTTTTAAAACAAATAGTTGCAACGGGTTGTTTTTAACAAGGTAAAAAGATGTTTTTTACCCTAACAGCCTGTTGCAGCTTATTTTTATCGGTTTATTCTATT # Right flank : AGAAAGTGAACCAAACGATGCAGTTCACTTTCAACATTTTAATGAGGTTCCTACTTTATATTGTGCATATTCATTATGACCTGCCTAATGGTGCTTTCGATATCAGGAGTCACCTCTTTTCGAGGTGTTGCGAGTTTTTTCAAGAGTTCTGCCTGGCGGTAGTCGGAAACATCACCATAGCTGTAAAAAGTAGTCAGTACGCCTTCATGACCTAAGTTTTGGCTCCAAGCTTTAAACTCTTCCGCGTTGCTACATAATTGCTCCCCTAAACGAGCTAGTGTGTTGCGAAAGCTATGTGGGTTGTAATAAGGCAATCCTGCTAGTTTGAAACTTTGCTTGAAGATTCTTCTGATTGGGTTTGCTGTTGTCCAATGCTCTTTTGTTAATCCCATGGCTTCAAACTGAAAGTTGGGGCTGTTCTTCACTTTCGTTTTTGGGAAAAGGGGAGCTTCTGGGCCGAATGAAAGCTCATTTGTTAGATAACTCACCCATTCGGTAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //