Array 1 210345-211291 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACHWT010000001.1 Corynebacterium bovis DSM 20582 = CIP 54.80 strain DSM 20582 Ga0310550_01, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================== ================== 210345 29 100.0 32 ............................. GGCTGGCACGGGTAACCACCGGTGAGAATGTC 210406 29 100.0 33 ............................. GCATGGTCACCCCCCCGTGAGCTCCGAGCCGCC 210468 29 100.0 32 ............................. ACAGCCCCGCTCGAGTCATGGCGGACGTACGC 210529 29 96.6 32 ............................G CGGCTGTGCATGACGTCAATCGCTGCGTTCAT 210590 29 100.0 32 ............................. ATCTGGGACGTCGCCGCCCGCAGATCATTCGT 210651 29 93.1 32 .............CG.............. ATGGTCGGCCAGGTGTGCGGTCTTCTGCATAG 210712 29 93.1 32 ............C...............T GCTTCGTTGAGTGTCGGTCCGGCAGGTGCCTG 210773 29 100.0 32 ............................. GTGGGCGTCCGGTCGGCACTGTCGACGACGGG 210834 29 96.6 32 ............................G CAATGGCAGCGGGTAGTGAAGTCGGGGGTTGA 210895 29 96.6 32 ......................G...... GCGTCCGAGTGGGCGCGCCTCGACTCGGATTT 210956 29 93.1 32 ............C...............G CGTTGGTGGTGTCCTTCCTTGAGGGTGTTGTG 211017 29 89.7 46 ...............A.........G..G CGGGGATGATCCGCAGGTCATCGGCGCGCTGGTCGGTGGTGTCAAC 211092 28 86.2 82 ............C.........C..-..T GCGGGGAGCACCCGCGGGGATGACCCCGGGCCGCGCCGCTCCTGGCTGGTAGGGAGGACGACCCGCTAGACTGCAGACACTG 211202 29 93.1 32 ............C...............G CGTCACGCTTGGACGACTTTGATCCGGCATGT 211263 28 93.1 0 ...........-................T | C [211278] ========== ====== ====== ====== ============================= ================================================================================== ================== 15 29 95.4 37 GTGCTCCCCGCGTGAGCGGGGATGATCCC # Left flank : GCACCGGAAGACGGGGTTGACCAGGTTCCCGGCGGCCCTTCGCGACGGGAGGCTCCGTGATCACCGTGGTGTTGACGTCTCCTCCGGAGCGGGTGCGTGGTCACCTCACGCGATGGCTCTCGGAAGTGGCGACCGGAGTGTATGTCGGCAAGGTGAGTGCCAGAGTGCGGGACGAGCTGTGGCAGATGATCCAGGTGAACATGGACGGCGGTCGGGCGGTGATGACGTACCCGACCACCATCTGCGAGCAGGGGTACGCCGTGAAGGTTCACAAACCGCAGTGGGAACCGGTTGATGTCGAGGGCCTGGTCCTGTTTCGTCGGCCGGGCCGTGACCGGACGTCGCGGACCCGCGGCGATTGGTCACGGGCCTCGCGGGAGCGCGACGGCAGGACCAGACGAGCGGATGATCTGCAGTGATGGTTGGTGCTGACGTGAGGGCGCTGATCGACATTGAATGAAATCTGGCTTCTCGTGTACTAACATCCCTGGTCAGGAAGT # Right flank : TCACCACCACCGCCCACCCACCTCCCGTCGTGTTCGCCCGTCCGCCGACCGCAGGTCTAAGGTGAATCCGTGGCCACGCGAACGACGACGAACAATGCCGCGCCCGGGTCAACCCGGCGCCGGCGGGGCTGGCGAGCGTTCCTCACGCCGGGCTGGGTCATCACCGCCGTCATCGTGGTGATGTTCGCCTACGTGGCGTTCACCGTCCTCGCGCCGTGGCAGCTGGGGAAGAACACCCGCACGCAGGAGAACAACCAGCGCCTGTCCGCCGCGATGGACGCCGACCCGGTGCCGGTCGAGGACGTCCTCCCCGCGGACGGCTCACCCGCCGGCGCGGACCGCGAGTGGACCCGCGTGACCCTCCAGGGCCGCTTCATCCCGGACGCCCAGGTGCTCCTGCGCAACCGCCCGGTGGACACGAGCCCCGCGTTCCAGGTCCTCACCGCGTTCCGCCTGGATTCGGGCGGCACGGTCCTCGTCAACCGGGGCTGGACGCCGCC # Questionable array : NO Score: 5.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:-0.25, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGATCCC # Alternate repeat : GTGCTCCCCGCGCGAGCGGGGATGATCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //