Array 1 54529-57317 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFBEH010000006.1 Streptococcus loxodontisalivarius strain DSM 27382 Ga0454049_06, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================================================================================ ================== 54529 31 100.0 37 ............................... CTGATAGGCTTGTTAAAAATCATAGCGATACCTAACG 54597 31 100.0 34 ............................... TTTTTAACAGAGGTGAATTTCCTCAATATTACGG 54662 31 100.0 34 ............................... ACAAAAGATATTGATAGTATCGTTGAAAAGATTG 54727 31 100.0 34 ............................... AAAGATTTTTTTGACCGAATTTGCCCTTGGACTG 54792 31 100.0 35 ............................... TTTTTCCTTGCTTCATTTATTTCGAATTTTTGATG 54858 31 100.0 34 ............................... TTGAGGTCTTAAAGAAGACTGGTATACCAGAGGG 54923 31 100.0 34 ............................... AGTTTTTTGTAAAAAACAAGATAAGACACAACAG 54988 31 100.0 35 ............................... TATATAATAAACAAAGCGTTTGCTCGATGGTTATG 55054 31 100.0 36 ............................... ATAACTCTTGGTGGAATTGTCTTTCATTTAGTTGTG 55121 31 100.0 36 ............................... ATAGGTCTTGGCTTGCTGAAATTTAGATTTAGCAGG 55188 31 100.0 34 ............................... GATAACAGGAATAAATCCTTTAAACTTCCCATCG 55253 31 100.0 35 ............................... AATAACTCCTTGCTTAGAATTACTTGTCATCAATG 55319 31 100.0 35 ............................... ACAAGTCATTTCGTTCGATACTCTTGGTGGCACAG 55385 31 100.0 34 ............................... TTCTTGATGAAATTGAAAAAGCCCACCCAGACGG 55450 31 100.0 36 ............................... GAAGAAACTGAACTGAAATTAAAATAAGGAGAAACG 55517 31 100.0 34 ............................... AATTAGTTACTTTAGGTTATCAAAATGTAATTAG 55582 31 100.0 34 ............................... TGGTAAACATCATTAAAGGTGAGAAAGCAGGAAG 55647 31 100.0 34 ............................... TACAATGACAAATATTTATCAACAATTGTTAATG 55712 31 100.0 36 ............................... CCTAAAATTACTGAAACAGTAATTATTAATCAAGCG 55779 31 100.0 35 ............................... AGAGGAGAACCTGATGATGAAGATTTGCAGGAACG 55845 31 100.0 35 ............................... TGTGCAGAAGAGGTGACTTACAACGGAGAGGACGG 55911 31 100.0 34 ............................... ATACGTAATCAAAATGCCATACCTACCAAAATAG 55976 31 100.0 35 ............................... AGAAATTTTGGCTTCACTTGATATTTTCGATATTG 56042 31 100.0 34 ............................... ATTAAGACTCATATCATATAAACCCGCAAATGAG 56107 31 100.0 34 ............................... CCAATTGAATACTTAATTACTACCGAAAAATATG 56172 31 100.0 37 ............................... AGCTTTGGTGGAGATAGCGACAGTCAAAATAAGCACG 56240 31 100.0 34 ............................... CTGCAATACGTTGTTTTGAATAGCAGTAGACGAG 56305 31 100.0 36 ............................... AATTGACTTGAAATGTTACTTCCCATTCCACTAACG 56372 31 100.0 35 ............................... TGATAGGGTATACCATGGGGCACGTTGAAATGCCG 56438 31 100.0 35 ............................... TTTAGTATCATCATGATTAACTGTTAATGTAGCTG 56504 31 100.0 34 ............................... AAATATTGGAGATATTCTATCAGACGCTAAAGAG 56569 31 100.0 36 ............................... TCAAACCCACAAGTAACTGCCAAGTGGGAAGTCTCG 56636 31 100.0 33 ............................... TGGGATAACTGGGTCGAAACAACAAAAATTAGG 56700 31 96.8 35 ............T.................. ACAAAAAGTTGAAAAACTAAACAAAAAGTTTAAAG 56766 31 100.0 34 ............................... TGATGCGAACGTTGCTGCATCGATTACCATGCTG 56831 31 100.0 37 ............................... TCAATCAACAACTGTATAGTAAATATAGCAAGAAACG 56899 31 100.0 34 ............................... AAGAATTGGAAATAAATGCTACTGGTGTCACAAG 56964 31 100.0 34 ............................... CCCACTAGATAATGCCAAGGTAGGCATGAAAATG 57029 31 100.0 35 ............................... TGTTATCTCAGGGGTATCTGATACGGACACTTCTG 57095 31 96.8 36 ..........................A.... TATCGTGTACGTAGCAGTAATTTTTTGACTAACTAG 57162 30 96.8 96 .............-................. AGAATTGCTGAACCTGCACCATTCAAATCGATATTCGTCGCACCGTGTGGATTGAAATATCAGACGCTCCATCTCAGTCTTTGTACCATCATGGAG 57288 30 83.9 0 ....-..TT..G.......A........... | ========== ====== ====== ====== =============================== ================================================================================================ ================== 42 31 99.4 36 TCGCACCCCATACGGGTGCGTGGATTGAAAT # Left flank : AGCGAAAGCCATTCGTGGGGAATTAGACTCTTATCCGCCGTTTTTGATTTAGGTATATTTTATGATGGTTTTAGTAACGTATGATGTCAATACAGAGACGACAGAAGGTAGAAAGCGCCTGCGCCATGTTGCGAAATTATGTATTGATTATGGGCAGCGTGTACAAAATTCAGTTTTCGAATGTTCTGTTACTCCGGCTGAATTTATAGAAATAAAAAATAAATTAGTCACGATTATTGATAAAGAATCAGATAGTATTCGATTTTATTTGCTTGGAAAAAATTGGCAAAATCGAATTGAGACGATTGGTCGAGATGATAGTTATGATCCTGATCAGGGAGTATTGCTATTATAAGTGGTGTGTGCGAATCTAGGTTACACATAAAATCCTGGGACATTCGCGCACAAAAAGTTAAAAAAGTGGCGAAAATCTAAATTTTATAGATTAAATCCATTCTATAAATGAGAGATTTGGTCACAAACGGTGTAATTACGCGCCG # Right flank : TCCTTTGACCGTCAAACTCGAATCACAGTCATCGAAGTCGCGCTCACAAAGGTGTGTGGACGGAAACTTAAATAAGTTCGACTACTAAAAACAATATTGAAATTGATCAGTGATTTGTCCCTCAATCCCCACTTTCTGCTATAATAGGTCAGTAAAAGAAGTGAGGAAATCAGATGAATCGTATCAATTTAATATGTTTAGGTGTTCGTGACATGGCACGCTCCGTGGCTTTTTACCGTGATGGTCTTGGTTTTGAGACTAAAGAGACGGCTGATTGTCCTGAGGTTATCTTTTTCAATAATGCTGGAACTAAGCTTGAGCTTTATCCACTTGAAAATCTGTCTGCTGATTTTGGAGCTGGTCTTCCGACGCTCCCAGCAGGGCATTTTAATGGCATGACCATGGCTTATAATGTCAAGGAAAGGTCTGAGGTTGATAGTGTTTTGGCTTTGGCAAAATCAGCTGGCGCTAGCATTTTGAAGGAACCGCAAGAGGTTTTC # Questionable array : NO Score: 9.11 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCATACGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.50,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //