Array 1 4632-4782 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLLW01000035.1 Streptomyces sp. PsTaAH-130 K376DRAFT_scaffold00035.35, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4632 28 100.0 33 ............................ GAGTTGACGGCTCGACAGCCGCGAGACCGACGT 4693 28 100.0 33 ............................ GCGGTGATGCCGGGCGGCAAGGGCATCGGCTCG 4754 27 71.4 0 ...............AA..GCA.CG..- | CC [4773] Deletion [4781] ========== ====== ====== ====== ============================ ================================= ================== 3 28 90.5 33 GTCCGCTCCGCGCAGGCGGAGGTGAACC # Left flank : CAAGGTCCGCGCCCGCGTCGAGCACGCCTTCGCACGCATGAAGACGTGGAAGATCCTCCGCGACTGCCGCCTCAAGGACGAGGGCGTCCACCACGCCATGCTCGGCATCGCCCGCCTCCACAACCTCACCCTCACAGGGTGAGAGGCAGCACTGCTGGTCAGTCGGCATGCCATAGATCATTTACGGGACAGCCCTTAGCCGACATGGGACACCCGAGCCTGCTCGTACAGCTACGCCGTAGGCGCCGCCCGCACCCGCTTCCTGCGTGTCGCATGAACGATGCACCAGTTGTGACGAAGGCTGGGCCGACAATACCCTTCTCCTCATCGCCGACGAACGAGCCCTGACCACCGCCGAGTTTCCGTTGCTGACCGCCAACAACCTGCCCGACGATGACGACGATCCGCTCAGGATCGCGGCGGCTTGCTCCCGGCCTACGGTCCATCTCCGCCTGCGCGGAGCGGACCGGCACGGTCCCGGGCTGCCGGAGCGGCCCCGC # Right flank : CTGGTCGATGGTGAGCGAGGACTCCACCACCTGACGGGCCCACCAGCACGCTGCCAGAGCCCGCAAGAGACGACCGCGAACCGGGAAAAGAACAACGCCCCGGCAGCACCGCCCGGATGAGGGACTCGGACGCTTCCGGGGCGGCCCCACCTGCAAAATCCATCTCGCCGGAGAAGGCGGACGCCGCCCTCTGGCCCCGCTGATCACACCGGGCCAGTGGGGCGACGCCCCGCAGTTCATCCCCGTGATGGACCGTATCCGGGGGGCCGCCATGAAGGCGGTCGCCCCCGCACCCGCCCTGACCATGTTGGCGGTGATAAGGCGTACTCCTCCGCCGCAATCGCCGCTACCTGCGAGGACGCCGGATCAAGCACACCATCCCCGAGCCGAAGAATGAGCGAGCCAACCGCCAGAGCCGAGGCAGCAGAGGCGGCCGACCCACTGGCTTCGACAAGTCGGTCTACAAAAGGAAAAACGAGGTTGAGCGGACGATGAACGGC # Questionable array : NO Score: 4.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.53, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCTCCGCGCAGGCGGAGGTGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCTCCGCGCAGGCGGAGGTGAGCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.80,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [18.3-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0.27 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 10087-12533 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLLW01000038.1 Streptomyces sp. PsTaAH-130 K376DRAFT_scaffold00038.38, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 10087 36 97.2 38 .......C............................ TCGTCGAGCCAGGTCCGGACGCGGTCGACGCCCTCGGG G [10100] 10162 36 97.2 36 .....................C.............. TTCGCCGGCGTCGGCGTCAACCGGTCCCGCTTCAAC 10235 35 97.2 34 ................-................... GGATCGGTGCCCCAGGTACCGGGCTGGTCCCCGG 10306 36 94.4 38 ........T...............A........... GGCCTGACGGTGGCTGAGCTGCTGTCCGGCTACGCCGC 10381 36 94.4 34 ............T...A................... ACGTCAACCCCTGCTACAGCAGCGGCGGTCTCGT T [10391] 10453 36 94.4 36 ........T.......T................... TCACGGGCTCCCGGGTCATCGACAAGCAGACCTACG T [10466] 10527 36 94.4 36 .............T.......C.............. TGATGAACGCCACGTTGTACAGCCGGGACAGGTGGT T [10541] 10601 35 91.7 36 .............T.C..-................. CGGCACGGGGTACCGCGGAGCGAAAGCCATCTGCAC 10673 36 97.2 36 ..............G..................... TGGTCCGTGACGGACGGGCCGGAGGTGGGGACGCCC 10746 36 91.7 36 ............TT.C.................... GCGATGTGCGGGTAGTGGTAGTGGCCGACGATCAGG 10819 36 91.7 35 ........G....T.C.................... GAGATGTACGCAGCCCTGCTCAAGGTCAAGTACGA 10891 36 97.2 34 ..............G..................... TCCGCGTCCAGGGTGTAGCGCGAGGTGATGAGCG 10962 35 94.4 36 ................-..........A........ CCCGAACCGGTACACGGCACGGTGTCCGCCGCGGCG 11035 36 100.0 35 .................................... CCGGTCGGTATCGACGTATCGATCATCGGCCTGCT 11107 36 100.0 36 .................................... CCCGAACTGGAGGACCAGCTGTGCACCTGGTACGAA 11180 36 97.2 39 ............T....................... GGCCTGAAGCTCGACGCCGACCACCAGGCGCTGTGGCTG 11256 36 100.0 36 .................................... TTCTCCAGGACACCAACGACACCGACCTCACGGTGG 11329 35 91.7 35 ..........-...TC.................... GGGGGTGGCGCCGTAAGCGATGGCGGTCTCCCGGG 11400 36 100.0 36 .................................... CAGAATCCGACGACCTGGTCCTTCATCCACGGCGCC 11473 36 100.0 36 .................................... TCCGACACCCTCAGTTCCTCGGCGAGTTGCCGGGGC 11546 36 94.4 35 ...........TT....................... CACGACGATCCCGGAGCGGATCGGGATCCGTTGGC 11618 36 100.0 37 .................................... CGTGTCGCTGTACCCGTCGTCTCCGTGGGCGACGGCG 11692 36 100.0 37 .................................... GCCGCGCTGTCCGCCGGCACCGACGATGCTCGCCGAG 11766 36 100.0 35 .................................... GTCCCCGACGCACAGCCCCCACAGGGCCTCCGCCG 11838 36 94.4 36 A.............T..................... TCCGGCATCTACGGCCGTACATACGTGGAGCGCACC 11911 36 100.0 38 .................................... AGATACATGCGCCGGGAGCGCGCGGCCGAGATGGTCAG 11986 36 97.2 36 ....................A............... ATCGTCGCCTACGCCAACGGCGACACCGCCACCGAC 12059 36 100.0 37 .................................... TTCAGGACGAAGGTCCGGAAGAGGATCGCCTTTCCCT 12133 36 97.2 35 ............................G....... AGCGGCCCGCTCCTGAAAGCGGCTGGAGACGATCG 12205 36 97.2 39 ......................T............. CCCGACAAGCCGAATGACCTGCGATACGCCTACATCGCC 12281 36 94.4 36 .............T.C.................... CTGTCTCGCCCGGCTGGGGCGACGAGATTGGGGCGG 12354 35 91.7 36 ....................-.A.......T..... CGTTCGGGTTTCGAGCGGTGATGCCGGTTGGGGTGC 12426 36 94.4 35 .C..........T....................... GAGGTCAGCGGGAACGAATTCATCGCCGGCCAGAT 12498 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 34 36 96.6 36 GTGGCGGTCGCCCCCGGGGCGACCGAGGATCGCAAC # Left flank : CCGACGCGCCAGGAAGACGTCGACGCCTGGAACAACCCCCAGGAAGGCAAGAGCAAGGGCAAGGAGACCGAGATGGGCTCCAAGCACATCGTCCCCTACGGCCTCTACAAAGGCGCCGGCCACTTCAGCGCCCCCCTCGCCGCCCGGACCAAGGTCACGTCCGATGACCTCACCACCTTCTGGCGGGCCTTCACCAACATGTTCGAGCACGACCGTGCCGCGGCTCGCGCCGGCCTCGCACTTCGCGGCCTCTACGTCTTCACCCACGCGGACGCCTTCGGCAGCGTCCCATCGCATGAGCTCATCGGCCGGATCACCGTGAAGCCCCTCGGCGAGGCCACCGCCCGCAGCTTCGCCGACTACGGGAGCATCGACGTGAGGGACGCCGACCTGCCGGACGGCGTCACCATCACGAAGCTCGTCGGGTGACCGCGCCCCACCCGCCGGCGAGAGGAGACGGAGAGCTCACCCACATGGACTGTCCTTGCTGCTCAGTCGGC # Right flank : ACACGCTGGCGTGATCAACCAGGGCCTGTTTTACCTGGCCTGGTTGCTGGATCACCGGGCCGAGGTCGAGCACCTGGTCCGTGACCGGCTCGGGACGACGGCCGCGGCCCAGGTCCTGTGGAGCGGCCCGCGCCTGATCTGCATCGCCGGCGACTTCACCCGCTACGACGTGCACGCCGTGCGCGAGCACCGGCGTTCGATCGACCTGGTCCGCTACCGACTCTTCGGCAGCGACCTGCTCGGCCTTGAGACTGTGGCGTCCGTGAGCGGTGGCATGCAGGTGGCCCGGCGAACGCGCCGGCAGGCCGTTGCTCGGGCGGCAGCCGACGTTCAGGGCCCGTTGATGGTGGAGTTGGCGAGCACGGTCGACGAGGTGCTGCTCGGGCTCGGGGACGGCGTGAACCGTGTGGAGCGCAAGCAGTACCGGGCGTACCAGCGGTTGCGGAACTTCGCGTGCGTCTGCCCGCCGCAGCGGAGCAAGCTCCTGGTCTACTTGAAGG # Questionable array : NO Score: 5.53 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGCGGTCGCCCCCGGGGCGACCGAGGATCGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGCGGTCGCCTCCCGGGGCGACCGAGGATCGCAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-16.30,-16.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [34-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //