Array 1 51841-52795 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAAIGR010000005.1 Streptococcus pyogenes strain K6635, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 51841 32 100.0 33 ................................ TCTCGTCATTAAACCAAAAGCCATAGATACCTC 51906 32 100.0 33 ................................ AAGTGAGCTGATAGCCTCTGCACGCTCATCATC 51971 32 100.0 33 ................................ TGCTACAAGTGACTTGTCATTATTCTTTGTTAA 52036 32 100.0 33 ................................ AAGTGAGCTGATAGCCTCTGCACGCTCATCATC 52101 32 100.0 33 ................................ CCTTCAAATAATTCCCATGGCTCGCGAATTCCA 52166 32 100.0 34 ................................ ATAATTACGAGTCTGTATGCGTCCTGTTATTGCA 52232 32 100.0 36 ................................ AGATAGTCTCTTGTCAAAGTGGATATAACCCAACTC 52300 32 100.0 34 ................................ ACTGGCTAGGCTTGGCCAACGTCTAATATTAATC 52366 32 100.0 33 ................................ AGATAAGTCATCTGCGACAATAACAGGAACTGT 52431 32 100.0 36 ................................ AGATAGTCTCTTGTCAAAGTGGATATAACCCAACTC 52499 32 100.0 33 ................................ ATAATTACGAGTCTGTATCGTCCTGTTATTGCA 52564 32 100.0 37 ................................ GTCTTGGATCATTTCTTGTCCCCAAGAAGTTGATATT 52633 32 100.0 33 ................................ ACTTTGGTAATGCGACACCTAAAAATTATGCGG 52698 32 96.9 34 .....G.......................... TCCACAAAACAAAAAGACGTCCATGTGAACGCCT 52764 32 93.8 0 .....G.........................G | ========== ====== ====== ====== ================================ ===================================== ================== 15 32 99.4 34 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTAACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAAAACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACCTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : GATGAACCCGACCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCATTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTCTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGGTAAAAAACTCTATTGGTATGGCATTGTCAAAACTTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTAC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.50,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //